| Literature DB >> 34566424 |
Jia He1, Zhan Wang2, Ying Wang3, Ting Zou4, Xiang-Ping Li1, Lei Cao1, Juan Chen1.
Abstract
PURPOSE: To investigate the relationships between Wnt1 inducible signaling pathway protein 1 (WISP1) polymorphisms and the prognosis of platinum-based chemotherapy in lung cancer patients. PATIENTS AND METHODS: A total of 363 lung cancer patients were recruited in this study. All of them received at least two cycles of platinum-based chemotherapy. We used unconditional logistic regression analysis to assess the associations of 39 single nucleotide polymorphisms in WISP1 gene with platinum-based chemotherapy prognosis.Entities:
Keywords: WISP1; genetic polymorphism; lung cancer; platinum-based chemotherapy; prognosis
Year: 2021 PMID: 34566424 PMCID: PMC8458023 DOI: 10.2147/PGPM.S325788
Source DB: PubMed Journal: Pharmgenomics Pers Med ISSN: 1178-7066
Association Between Clinical Characteristics and PFS and OS of Patients with Lung Cancer
| Variables | Overall Survival (OS) | Progression-Free Survival (PFS) | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| MST (Year) | Death/Total | P1 | HR (95% CI) | P2 | MST (Year) | Progression/Total | P1 | HR (95% CI) | P2 | |
| Age (year) | ||||||||||
| <60 | 4.28 | 159/164 | 0.133 | Ref. | 0.134 | 4.32 | 178/242 | 0.611 | Ref. | 0.611 |
| ≥60 | 4.33 | 94/97 | 0.82(0.63–1.06) | 4.07 | 102/130 | 1.06(0.83–1.36) | ||||
| Gender | ||||||||||
| Female | 4.62 | 49/51 | 0.218 | Ref. | 0.219 | 4.98 | 44/76 | 0.287 | Ref. | 0.288 |
| Male | 4.10 | 204/210 | 0.82(0.60–1.12) | 3.89 | 135/296 | 0.85(0.64–1.14) | ||||
| Smoking status | ||||||||||
| Never smoker | 4.62 | 91/93 | 0.393 | Ref. | 0.394 | 4.83 | 101/137 | 0.226 | Ref. | 0.227 |
| Ever smoker | 3.72 | 161/167 | 0.89(0.69–1.16) | 3.72 | 178/234 | 0.86(0.67–1.10) | ||||
| Histology | ||||||||||
| NSCLC | 4.36 | 137/179 | 0.668 | Ref. | 0.668 | 3.92 | 193/250 | 0.289 | Ref. | 0.289 |
| SCLC | 4.06 | 77/79 | 1.06(0.81–1.39) | 4.81 | 87/122 | 0.87(0.68–1.12) | ||||
| TNM stage | ||||||||||
| I/II | 3.94 | 6/6 | 0.764 | Ref. | 0.765 | 4.07 | 7/11 | 0.416 | Ref. | 0.418 |
| III/IV | 4.42 | 169/175 | 0.88(0.39–2.00) | 3.89 | 148/239 | 1.37(0.64–2.91) | ||||
| LD | 3.50 | 33/34 | 0.905 | Ref. | 0.905 | 4.31 | 37/52 | 0.862 | Ref. | 0.862 |
| ED | 4.10 | 43/44 | 1.03(0.65–1.63) | 4.89 | 49/67 | 1.04(0.68–1.60) | ||||
Notes: P1, P-value for Log rank test; P2, P-value for univariate Cox hazards regression analysis; P < 0.05 are indicated in bold text.
Abbreviations: MST, median survival time (year); HR, hazard ratio; CI, confidence interval; Ref., reference; NSCLC, lung adenocarcinoma; SCLC, lung squamous cell carcinoma.
Association Between Single Nucleotide Polymorphisms (SNPs) and Clinical Outcomes in Lung Cancer Patients
| Gene/SNP | Model | Genotype | Progression-Free Survival (PFS) | Overall Survival (OS) | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Progression/Total | MST (Month) | P1 | HR (95% CI) | P2 | Death/Total | MST (Month) | P1 | HR (95% CI) | P2 | |||
| rs16904853 | Additive | CC | 65/95 | 4.964 | Ref. | 58/71 | 4.918 | 0.238 | Ref. | |||
| CT | 133/181 | 4.310 | 0.581(0.409–0.825) | 0.004 | 120/135 | 4.422 | 0.711(0.497–1.017) | 0.155 | ||||
| TT | 71/82 | 2.397 | 0.694(0.515–0.936) | 0.011 | 65/70 | 4.362 | 0.907(0.667–1.233) | 0.062 | ||||
| Dominant | CC | 65/95 | 4.964 | 0.105 | Ref. | 0.101 | 58/71 | 4.918 | 0.123 | Ref. | 0.069 | |
| CT/TT | 204/263 | 3.800 | 0.790(0.597–1.047) | 185/205 | 4.392 | 1.320(0.979–1.780) | ||||||
| Recessive | CC/CT | 198/276 | 4.581 | Ref. | 0.003 | 178/206 | 4.660 | 0.232 | Ref. | 0.207 | ||
| TT | 71/82 | 2.397 | 0.658(0.500–0.866) | 65/70 | 4.362 | 0.831(0.623–1.108) | ||||||
| rs10956697 | Additive | CC | 105/155 | 4.964 | Ref. | 93/113 | 4.921 | 0.120 | Ref. | |||
| CA | 128/160 | 3.279 | 0.609(0.411–0.904) | 0.050 | 115/127 | 4.447 | 0.617(0.402–0.948) | 0.042 | ||||
| AA | 35/42 | 2.871 | 0.902(0.616–1.320) | 0.140 | 30/33 | 3.942 | 0.817(0.539–1.239) | 0.028 | ||||
| Dominant | CC | 105/155 | 4.964 | Ref. | 0.001 | 93/113 | 4.921 | Ref. | 0.021 | |||
| CA/AA | 163/202 | 3.107 | 0.662(0.515–0.852) | 145/160 | 4.416 | 0.728(0.557–0.953) | ||||||
| Recessive | CC/CA | 233/315 | 4.362 | 0.169 | Ref. | 0.421 | 208/240 | 4.767 | 0.289 | Ref. | 0.102 | |
| AA | 35/42 | 2.871 | 0.749(0.520–1.078) | 30/33 | 3.942 | 0.717(0.482–1.069) | ||||||
| rs2929965 | Additive | CC | 75/110 | 4.833 | Ref. | 65/80 | 4.833 | 0.361 | Ref. | |||
| CT | 140/188 | 4.416 | 0.600(0.416–0.866) | 0.018 | 127/144 | 4.529 | 0.731(0.499–1.070) | 0.258 | ||||
| TT | 50/57 | 3.260 | 0.622(0.473–0.925) | 0.060 | 46/48 | 4.625 | 0.793(0.562–1.119) | 0.107 | ||||
| Dominant | CC | 75/110 | 4.833 | 0.163 | Ref. | 0.165 | 65/80 | 4.833 | 0.313 | Ref. | 0.340 | |
| CT/TT | 190/245 | 4.074 | 0.826(0.630–1.082) | 173/192 | 4.581 | 0.870(0.653–1.159) | ||||||
| Recessive | CC/CT | 215/298 | 4.523 | Ref. | 0.006 | 192/224 | 4.619 | 0.208 | Ref. | 0.080 | ||
| TT | 50/57 | 3.260 | 0.638(0.464–0.878) | 46/48 | 4.625 | 0.770(0.555–1.069) | ||||||
| rs2929973 | Additive | TT | 98/146 | 4.811 | 0.051 | Ref. | 85/108 | 4.833 | 0.154 | Ref. | ||
| GT | 145/179 | 3.380 | 0.724(0.478–1.099) | 0.031 | 132/145 | 4.529 | 0.741(0.474–1.159) | 0.124 | ||||
| GG | 30/37 | 3.534 | 1.021(0.685–1.522) | 0.129 | 26/28 | 4.858 | 0.978(0.638–1.500) | 0.189 | ||||
| Dominant | TT | 98/146 | 4.811 | Ref. | 0.008 | 85/108 | 4.833 | 0.059 | Ref. | |||
| GT/GG | 175/216 | 3.800 | 0.712(0.553–0.916) | 158/173 | 4.619 | 0.755(0.576–0.989) | ||||||
| Recessive | TT/GT | 243/325 | 4.195 | 0.596 | Ref. | 0.509 | 217/250 | 4.581 | 0.894 | Ref. | 0.511 | |
| GG | 30/37 | 3.534 | 0.878(0.579–1.291) | 26/28 | 4.858 | 0.871(0.576–1.316) | ||||||
| rs7828685 | Additive | AA | 101/145 | 4.918 | Ref. | 90/108 | 4.844 | 0.163 | Ref. | |||
| GA | 118/155 | 3.888 | 0.617(0.441–0.864) | 0.014 | 107/120 | 4.619 | 0.699(0.488–1.001) | 0.093 | ||||
| GG | 54/62 | 2.151 | 0.807(0.581–1.120) | 0.005 | 46/49 | 3.910 | 0.898(0.633–1.275) | 0.051 | ||||
| Dominant | AA | 101/145 | 4.918 | Ref. | 0.010 | 90/108 | 4.844 | 0.080 | Ref. | 0.037 | ||
| GA/GG | 172/217 | 3.249 | 0.718(0.558–0.923) | 153/169 | 4.447 | 1.327(1.017–1.732) | ||||||
| Recessive | AA/GA | 219/300 | 4.416 | Ref. | 0.024 | 197/228 | 4.789 | 0.177 | Ref. | 0.163 | ||
| GG | 54/62 | 2.151 | 0.706(0.522–0.956) | 46/49 | 3.910 | 1.327(1.017–1.732) | ||||||
| rs2977551 | Additive | TT | 96/142 | 4.885 | 0.086 | Ref. | 83/102 | 4.918 | 0.124 | Ref. | ||
| CT | 132/169 | 4.049 | 0.674(0.471–0.964) | 0.037 | 121/135 | 4.619 | 0.658(0.449–0.965) | 0.052 | ||||
| CC | 46/55 | 3.107 | 0.911(0.648–1.281) | 0.031 | 41/43 | 3.907 | 0.881(0.641–1.263) | 0.032 | ||||
| Dominant | TT | 96/142 | 4.885 | Ref. | 0.012 | 83/102 | 4.918 | Ref. | 0.020 | |||
| CT/CC | 178/224 | 3.723 | 0.723(0.561–0.932) | 162/178 | 4.447 | 0.725(0.552–0.913) | ||||||
| Recessive | TT/CT | 228/311 | 4.700 | 0.204 | Ref. | 0.163 | 204/237 | 4.811 | 0.296 | Ref. | 0.148 | |
| CC | 46/55 | 4.457 | 0.795(0.576–1.097) | 41/43 | 3.907 | 0.777(0.552–1.093) | ||||||
| rs2977549 | Additive | TT | 96/141 | 4.921 | 0.053 | Ref. | 82/100 | 4.918 | 0.145 | Ref. | ||
| CT | 119/149 | 3.066 | 0.691(0.492–0.971) | 0.027 | 116/130 | 4.416 | 0.716(0.500–1.025) | 0.094 | ||||
| CC | 53/63 | 3.279 | 0.966(0.698–1.335) | 0.832 | 49/53 | 4.625 | 0.948(0.767–1.328) | 0.068 | ||||
| Dominant | TT | 96/141 | 4.921 | Ref. | 0.059 | 82/100 | 4.918 | 0.055 | Ref. | 0.032 | ||
| CT/CC | 180/227 | 3.534 | 0.708(0.550–0.912) | 165/181 | 4.447 | 0.744(0.567–0.974) | ||||||
| Recessive | TT/CT | 223/305 | 4.362 | 0.213 | Ref. | 0.373 | 198/230 | 4.660 | 0.271 | Ref. | 0.271 | |
| CC | 53/63 | 3.279 | 0.826(0.610–1.119) | 49/51 | 4.625 | 0.837(0.611–1.148) | ||||||
Notes: P1, P-value for Log rank test; P2, P-value for multivariate Cox hazards regression with adjustment for age, gender, and histology; P < 0.05 are indicated in bold text; Additive model, comparison between minor allele subjects and major allele subjects; Dominant model, comparison between minor allele carriers and major homozygous subjects; Recessive model, comparison between major allele carriers and minor homozygous subjects.
Abbreviations: MST, median survival time (year); HR, hazard ratio; CI, confidence interval.
Figure 1Kaplan–Meier plots of lung cancer patients with different genotypes of in WISP1 gene. (A) PFS of lung cancer patients by rs16904853, rs10956697, rs7828685, rs2929965 genotypes using additive model. (B) PFS of lung cancer patients by rs10956697, rs2929973, rs7828685, rs2977551, rs2977549 genotypes using dominant model. (C) PFS of lung cancer patients by rs16904853, rs2929965, rs7828685 genotypes using recessive model.
Figure 2Kaplan–Meier plots of lung cancer patients with different genotypes of in WISP1 gene. (A) OS of lung cancer patients by rs10956697 using dominant model. (B) OS of lung cancer patients by rs2977551 using dominant model.
Association Between Single Nucleotide Polymorphisms (SNPs) and Disease Progression in Lung Cancer Patients
| Gene/SNP | Genotype | T Stage | N Stage | M Stage | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| T1/T2 | T3/T4 | OR (95% CI) | P | N0 | N1/N2/N3 | OR (95% CI) | P | M0 | M1 | OR (95% CI) | P | ||
| rs16904853 | CC | 26 | 102 | Ref. | 0.060 | 2 | 6 | Ref. | 0.199 | 13 | 41 | Ref. | 0.735 |
| CT/TT | 28 | 100 | 0.542 (0.286–1.027) | 11 | 187 | 0.587 (0.260–1.324) | 43 | 109 | 1.135(0.546–2.358) | ||||
| CC/CT | 62 | 99 | Ref. | 0.858 | 28 | 133 | Ref. | 0.933 | 56 | 111 | Ref. | 0.050 | |
| TT | 14 | 29 | 0.858(0.426–1.731) | 8 | 36 | 0.962(0.390–2.377) | 5 | 38 | 0.386(0.150–0.999) | ||||
| rs10956697 | CC | 37 | 41 | Ref. | 0.216 | 15 | 73 | Ref. | 0.683 | 19 | 69 | Ref. | 0.312 |
| CA/AA | 39 | 76 | 0.691(0.384–1.242) | 21 | 94 | 1.174 (0.544–2.531) | 34 | 81 | 1.414 (0.723–2.767) | ||||
| CC/CA | 67 | 112 | Ref. | 0.964 | 31 | 148 | Ref. | 0.700 | 49 | 130 | Ref. | 0.512 | |
| AA | 9 | 15 | 1.021(0.413–2.518) | 5 | 19 | 1.247(0.407–3.821) | 43 | 20 | 0.673(0.207–2.188) | ||||
| rs2929965 | CC | 26 | 35 | Ref. | 0.858 | 13 | 48 | Ref. | 0.779 | 12 | 49 | Ref. | 0.281 |
| CT/TT | 51 | 89 | 1.122(0.318–3.956) | 23 | 117 | 1.160 (0.413–3.259) | 43 | 97 | 1.687 (0.652–4.366) | ||||
| CC/ CT | 65 | 12 | Ref. | 0.762 | 31 | 5 | Ref. | 0.843 | 49 | 6 | Ref. | 0.931 | |
| TT | 105 | 19 | 1.245(0.302–5.135) | 139 | 26 | 0.830(0.131–5.252) | 121 | 25 | 0.931(0.180–4.817) | ||||
| rs2929973 | TT | 41 | 45 | Ref. | 17 | 69 | Ref. | 0.654 | 17 | 69 | Ref. | 0.066 | |
| GT/GG | 36 | 82 | 0.486 (0.271–0.871) | 19 | 100 | 0.841 (0.395–1.792) | 39 | 80 | 1.868 (0.960–3.634) | ||||
| TT/ GT | 72 | 113 | Ref. | 0.446 | 32 | 153 | Ref. | 0.785 | 52 | 133 | Ref. | 0.539 | |
| GG | 7 | 14 | 0.673(0.243–1.865) | 4 | 16 | 1.182(0.354–3.949) | 4 | 16 | 0.691(0.212–2.252) | ||||
| rs7828685 | AA | 35 | 47 | Ref. | 0.275 | 14 | 68 | Ref. | 0.784 | 18 | 64 | Ref. | 0.153 |
| GA/GG | 43 | 81 | 0.723 (0.404–1.294) | 22 | 103 | 1.114 (0.513–2.421) | 38 | 86 | 1.626 (0.834–3.170) | ||||
| AA /GA | 68 | 105 | Ref. | 0.380 | 30 | 142 | Ref. | 0.890 | 51 | 122 | Ref. | 0.190 | |
| GG | 10 | 22 | 0.692(0.304–1.573) | 6 | 28 | 1.074(0.390–2.963) | 5 | 28 | 0.499(0.176–1.413) | ||||
| rs2977551 | TT | 40 | 42 | Ref. | 17 | 65 | Ref. | 0.374 | 19 | 63 | Ref. | 0.187 | |
| CT/CC | 37 | 89 | 0.428 (0.238–0.771) | 19 | 107 | 0.708 (0.330–1.517) | 38 | 88 | 1.564 (0.805–3.038) | ||||
| TT/ CT | 69 | 109 | Ref. | 0.212 | 31 | 147 | Ref. | 0.768 | 52 | 126 | Ref. | 0.263 | |
| CC | 8 | 22 | 0.572 (0.238–1.375) | 5 | 25 | 0.850 (0.288–2.504) | 5 | 23 | 0.549 (0.192–1.569) | ||||
| rs2977549 | TT | 41 | 41 | Ref. | 18 | 64 | Ref. | 0.327 | 20 | 62 | Ref. | 0.376 | |
| CT/CC | 39 | 91 | 0.438 (0.246–0.781) | 20 | 110 | 0.690 (0.328–1.450) | 38 | 92 | 1.339 (0.701–2.558) | ||||
| TT/ CT | 70 | 108 | Ref. | 0.277 | 33 | 145 | Ref. | 0.746 | 53 | 125 | Ref. | 0.167 | |
| CC | 10 | 24 | 0.640(0.286–1.432) | 5 | 29 | 0.839(0.291–2.420) | 5 | 29 | 0.505(0.192–1.331) | ||||
Notes: P < 0.05 are indicated in bold text; P, P-value for binary logistic regression analysis.
Abbreviations: OR, odds ratio; CI, confidence interval; Ref., reference.
Stratified Analysis of the Association Between rs2929973, rs2977551, rs2977549 and Prognosis in Lung Cancer Patients
| SNP | Subgroups | Overall Survival (OS) | Progression-Free Survival (PFS) | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Death/Total | HR (95% CI) | P | Progression/Total | HR (95% CI) | P | |||||
| 11 | 12/22 | 11 | 12/22 | |||||||
| rs2929973 | Age (years) | |||||||||
| ≤60 | 45/62 | 109/120 | 0.650 (0.458–0.924) | 55/90 | 120/148 | 1.535 (1.114–2.116) | ||||
| Smoking status | ||||||||||
| Never smoker | 24/33 | 64/71 | 0.617(0.383–0.994) | 31/50 | 69/85 | 1.457(0.952–2.231) | 0.083 | |||
| Histology | ||||||||||
| NSCLC | 57/70 | 109/117 | 0.693(0.501–0.959) | 67/97 | 117/143 | 1.338(0.990–1.808) | 0.058 | |||
| TNM stage | ||||||||||
| III/IV | 59/75 | 107/114 | 0.649(0.470–0.896) | 70/102 | 119/143 | 1.377(1.024–1.852) | ||||
| ED | 10/10 | 25/27 | 1.002(0.466–2.156) | 0.995 | 10/19 | 28/32 | 2.550(1.188–5.473) | |||
| rs2977551 | Age (years) | |||||||||
| ≤60 | 26/28 | 130/154 | 1.222(0.800–1.867) | 0.353 | 53/85 | 121/153 | 1.413(1.022–1.954) | |||
| Smoking status | ||||||||||
| Never smoker | 11/12 | 36/47 | 1.858(0.434–1.695) | 0.660 | 27/45 | 71/89 | 1.572(1.007–2.455) | |||
| rs2977549 | Age (years) | |||||||||
| ≤60 | 54/66 | 104/117 | 1.178(0.846–1.639) | 0.332 | 54/84 | 117/145 | 1.480(1.071–2.047) | |||
| Histology | ||||||||||
| NSCLC | 56/68 | 114/122 | 1.502(1.087–2.075) | 66/93 | 51/121 | 1.358(1.005–1.835) | ||||
| SCLC | 82/100 | 165/182 | 1.288(0.987–1.682) | 0.063 | 77/119 | 133/176 | 1.350(1.018–1.791) | |||
| TNM stage | ||||||||||
| III/IV | 55/69 | 115/123 | 1.601(1.157–2.216) | 66/95 | 126/155 | 1.419(1.053–1.913) | ||||
| ED | 11/11 | 24/26 | 0.765(0.362–1.615) | 0.482 | 11/20 | 27/32 | 0.481(0.232–1.000) | 0.050 | ||
Notes: P < 0.05 are indicated in bold text; P, P-value for multivariate Cox hazards regression analysis with adjustment for age, gender, and histology; 11/12/22 = wild type/heterozygote/homozygote.
Abbreviations: HR, hazard ratio; CI, confidence interval; Ref., reference; LUAD, lung adenocarcinoma; LUSC, lung squamous cell carcinoma.