Literature DB >> 34559639

Higher-Order Explanations of Graph Neural Networks via Relevant Walks.

Thomas Schnake, Oliver Eberle, Jonas Lederer, Shinichi Nakajima, Kristof T Schutt, Klaus-Robert Muller, Gregoire Montavon.   

Abstract

Graph Neural Networks (GNNs) are a popular approach for predicting graph structured data. As GNNs tightly entangle the input graph into the neural network structure, common explainable AI approaches are not applicable. To a large extent, GNNs have remained black-boxes for the user so far. In this paper, we show that GNNs can in fact be naturally explained using higher-order expansions, i.e., by identifying groups of edges that jointly contribute to the prediction. Practically, we find that such explanations can be extracted using a nested attribution scheme, where existing techniques such as layer-wise relevance propagation (LRP) can be applied at each step. The output is a collection of walks into the input graph that are relevant for the prediction. Our novel explanation method, which we denote by GNN-LRP, is applicable to a broad range of graph neural networks and lets us extract practically relevant insights on sentiment analysis of text data, structure-property relationships in quantum chemistry, and image classification.

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Year:  2022        PMID: 34559639     DOI: 10.1109/TPAMI.2021.3115452

Source DB:  PubMed          Journal:  IEEE Trans Pattern Anal Mach Intell        ISSN: 0098-5589            Impact factor:   9.322


  2 in total

1.  Multi-omics disease module detection with an explainable Greedy Decision Forest.

Authors:  Bastian Pfeifer; Hubert Baniecki; Anna Saranti; Przemyslaw Biecek; Andreas Holzinger
Journal:  Sci Rep       Date:  2022-10-07       Impact factor: 4.996

2.  Patient-level proteomic network prediction by explainable artificial intelligence.

Authors:  Philipp Keyl; Michael Bockmayr; Daniel Heim; Gabriel Dernbach; Grégoire Montavon; Klaus-Robert Müller; Frederick Klauschen
Journal:  NPJ Precis Oncol       Date:  2022-06-07
  2 in total

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