| Literature DB >> 34549366 |
Sounak Gupta1,2, Helen Won1, Kalyani Chadalavada3, Gouri J Nanjangud3, Ying-Bei Chen1, Hikmat A Al-Ahmadie1, Samson W Fine1, Sahussapont J Sirintrapun1, Vivian E Strong4, Nitya Raj5, Diane Reidy Lagunes5, Chad M Vanderbilt1, Michael F Berger1, Marc Ladanyi1, Snjezana Dogan1, Satish K Tickoo1, Victor E Reuter1, Anuradha Gopalan6.
Abstract
Molecular characterization of adrenocortical carcinomas (ACC) by The Cancer Genome Atlas (TCGA) has highlighted a high prevalence of TERT alterations, which are associated with disease progression. Herein, 78 ACC were profiled using a combination of next generation sequencing (n = 76) and FISH (n = 9) to assess for TERT alterations. This data was combined with TCGA dataset (n = 91). A subset of borderline adrenocortical tumors (n = 5) and adrenocortical adenomas (n = 7) were also evaluated. The most common alteration involving the TERT gene involved gains/amplifications, seen in 22.2% (37/167) of cases. In contrast, "hotspot" promoter mutations (C > T promoter mutation at position -124, 7/167 cases, 4.2%) and promoter rearrangements (2/165, 1.2%) were rare. Recurrent co-alterations included 22q copy number losses seen in 24% (9/38) of cases. Although no significant differences were identified in cases with and without TERT alterations pertaining to age at presentation, tumor size, weight, laterality, mitotic index and Ki67 labeling, cases with TERT alterations showed worse outcomes. Metastatic behavior was seen in 70% (28/40) of cases with TERT alterations compared to 51.2% (65/127, p = 0.04) of cases that lacked these alterations. Two (of 5) borderline tumors showed amplifications and no TERT alterations were identified in 7 adenomas. In the borderline group, 0 (of 4) patients with available follow up had adverse outcomes. We found that TERT alterations in ACC predominantly involve gene amplifications, with a smaller subset harboring "hotspot" promoter mutations and rearrangements, and 70% of TERT-altered tumors are associated with metastases. Prospective studies are needed to validate the prognostic impact of these findings.Entities:
Keywords: Adrenocortical adenoma; Adrenocortical carcinoma; TCGA; TERT
Mesh:
Substances:
Year: 2021 PMID: 34549366 PMCID: PMC9135779 DOI: 10.1007/s12022-021-09691-0
Source DB: PubMed Journal: Endocr Pathol ISSN: 1046-3976 Impact factor: 4.056
Fig. 1Histopathologic features of adrenocortical carcinomas including high mitotic index (a), necrosis (b), extra-capsular extension (c), lymphovascular invasion (d), and lymph node involvement (e) have been depicted. An adrenocortical carcinoma with myxoid features (f) that harbored a TERT amplification has been shown
Prevalence of TERT alterations in adrenal cortical tumors
| 78 | 91 | 169 | 5 | |
| 27 of 78 (34.6%) | 18 of 91 (19.8%) | 45 of 169 (26.6%) | 2 of 5 (40%) | |
| 3 of 76 (3.9%) | 4 of 91 (4.4%) | 7 of 167 Cases (4.2%) | 0 of 4 (0%) | |
| 24a of 78 (30.7%) | 13 of 89 Cases (14.6%) | 37a of 167 Cases (22.2%) | 2 of 5 (40%) | |
2.1, range 1.5 to 5.8 ( | - | - | 1.5 ( | |
| 1a of 76 (1.3%) | 1 of 89 Cases (1.1%) | 2a of 165 Cases (1.2%) | 0 Cases |
No TERT alterations were identified for 7 cases of adrenocortical adenomas which were profiled using MSK-IMPACT (including 3 oncocytic adenomas and 1 pigmented adenoma). MSK-IMPACT copy number predictions for TERT amplification was confirmed by FISH for 8 cases and copy number assessment was performed using FISH only for 2 cases
aA single case had a TERT promoter rearrangement in the background of genomic amplification at the same locus
Fig. 2Copy number alterations for an adrenocortical carcinoma, including TERT amplification, determined using next generation sequencing and fluorescence in situ hybridization has been depicted (a, b). Relative (Log2) tumor/normal ratios (y axis) and corresponding chromosomes (x axis) are displayed, with each blue dot representing an individual probe region and amplified regions are shown in red (a). Corresponding fluorescence in situ hybridization results using probes for TERT (5p12, red) and control probes (5p12, yellow; 5q11, green) is shown (b). A structural rearrangement of the TERT promoter region with CLPTM1L (c), and a somatic TERT promoter mutation (g.1295228C > T) (d) identified using hybridization-capture based next generation sequencing has been depicted
Clinical features of adrenal cortical carcinomas with TERT alterations
| 48.6 | 51.5 | 46.1 | 51.4 | 47.1 | 51.5 | 43.3 | 63 | |
| 19:32 | 11:16 | 26:49 | 4:9 | 45:81 | 15:25 | 0:3 | 0:2 | |
| 14:18 | 11:16 | 25:36 | 7:6 | 39:54 | 18:22 | 1:2 | 1:1 | |
| 14.3 (range 4 to 27.2, | 14.3 (range 2.5 to 31, | 10.6 (range 2.5 to 20, | 10.1 (7 to 17.1, | 11.7 (range 2.5 to 27.2, | 11.2 (range 2.5 to 31, | 9 (range 5.8 to 12.5, | 17 (range 15 to 19, | |
| 1019.1 (range 60 to 3790, | 1146.7 (range 77 to 7065, | 441.5 (range 22 to 2469, | 300.4 (102.4 to 560, | 547.9 (range 22 to 3790, | 655.8 (range 77 to 7065, | 230.6 (range 32 to 392, | 1205 (range 1000 to 1410, | |
| 27 of 51 cases | 21 of 27 cases | 40 of 76 cases | 8 of 13 cases | 67 of 127 cases | 29 of 40 cases | 3 of 3 cases | 1 of 2 cases | |
| 32.4 | 78.7 | 56.2 | 49.5 | 46.6 | 74.1 | 44.3 | 78 | |
| 36/51 (70.6%) | 19/27 (70.4%) | 29/76 (38.2%) | 9/13 (69.2%) | 65/127 (51.2%) | 28/40 (70%) | 0 of 3 Cases | 0 of 1 Case | |
AWoD: 3 of 51 AWD: 15 of 51 DOC: 1 DOD: 6 of 51 Unknown: 26 of 51 | AWoD: 6 of 22 AWD: 10 of 22 DOD: 6 of 22 | AWoD: 5 of 76 AWD: 25 of 76 Unknown: 46 of 76 | AWoD: 4 of 13 AWD: 9 of 13 | AWoD: 8 of 127 AWD: 40 of 127 DOC: 1 DOD: 6 of 127 Unknown: 72 of 127 | AWoD: 10 of 35 AWD: 19 of 35 DOD: 6 of 35 | AWoD: 3 | AWoD: 1 DOC: 1 |
AWoD alive without disease, AWD alive with disease, DOC dead of other causes, DOD dead of disease
Histopathologic and genomic features of adrenal cortical carcinomas with TERT alterations
| 39.6 ( | 20.1 ( | 24.7 ( | 20 ( | 31.7 ( | 21 ( | 2 ( | 10.5 ( | |
| 30.3 ( | 20.2 ( | 17.5 ( | 17.5 ( | 20.5 ( | 19.9 ( | – | – | |
| Not evaluated | Not evaluated | Not evaluated | – | – | ||||
| Not evaluated | 9p21 Loss ( : 2 of 25 | Not evaluated | 9p21 Loss ( : 7 of 13 | Not evaluated | 9p21 Loss ( : 9 of 38 | – | – |
No TERT alterations were identified for 7 cases of adrenocortical adenomas which were profiled using MSK-IMPACT (including 3 oncocytic adenomas and 1 pigmented adenoma)
Fig. 3The prevalence of TERT alterations (genomic amplifications, black; “hotspot” promoter mutations, white) in the current study, compared to previously reported cases from representative studies in the literature have been shown. The total number of cases that were profiled for amplification events (Amp) and “hotspot” promoter mutations (PM) in each study has been depicted in the figure legend on the left. TCGA The Cancer Genome Atlas