Literature DB >> 34547329

Conformational Changes of RORγ During Response Element Recognition and Coregulator Engagement.

Timothy S Strutzenberg1, Yingmin Zhu2, Scott J Novick1, Ruben D Garcia-Ordonez1, Christelle Doebelin1, Yuanjun He1, Mi Ra Chang1, Theodore M Kamenecka1, Dean P Edwards2, Patrick R Griffin3.   

Abstract

The retinoic acid receptor-related orphan receptor γ (RORγ) is a ligand-dependent transcription factor of the nuclear receptor super family that underpins metabolic activity, immune function, and cancer progression. Despite being a valuable drug target in health and disease, our understanding of the ligand-dependent activities of RORγ is far from complete. Like most nuclear receptors, RORγ must recruit coregulatory protein to enact the RORγ target gene program. To date, a majority of structural studies have been focused exclusively on the RORγ ligand-binding domain and the ligand-dependent recruitment of small peptide segments of coregulators. Herein, we examine the ligand-dependent assembly of full length RORγ:coregulator complexes on cognate DNA response elements using structural proteomics and small angle x-ray scattering. The results from our studies suggest that RORγ becomes elongated upon DNA recognition, preventing long range interdomain crosstalk. We also determined that the DNA binding domain adopts a sequence-specific conformation, and that coregulatory protein may be able to 'sense' the ligand- and DNA-bound status of RORγ. We propose a model where ligand-dependent coregulator recruitment may be influenced by the sequence of the DNA to which RORγ is bound. Overall, the efforts described herein will illuminate important aspects of full length RORγ and monomeric orphan nuclear receptor target gene regulation through DNA-dependent conformational changes.
Copyright © 2021 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  HDX; RORγ; RORγt; XL-MS; integrative structural modeling; transcriptional coregulators

Mesh:

Substances:

Year:  2021        PMID: 34547329      PMCID: PMC8556364          DOI: 10.1016/j.jmb.2021.167258

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  99 in total

1.  Ab initio electron density determination directly from solution scattering data.

Authors:  Thomas D Grant
Journal:  Nat Methods       Date:  2018-01-29       Impact factor: 28.547

2.  Retinoid-related orphan receptor gamma (RORgamma) is essential for lymphoid organogenesis and controls apoptosis during thymopoiesis.

Authors:  S Kurebayashi; E Ueda; M Sakaue; D D Patel; A Medvedev; F Zhang; A M Jetten
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-29       Impact factor: 11.205

3.  Interleukin-17 and lung host defense against Klebsiella pneumoniae infection.

Authors:  P Ye; P B Garvey; P Zhang; S Nelson; G Bagby; W R Summer; P Schwarzenberger; J E Shellito; J K Kolls
Journal:  Am J Respir Cell Mol Biol       Date:  2001-09       Impact factor: 6.914

4.  HDX workbench: software for the analysis of H/D exchange MS data.

Authors:  Bruce D Pascal; Scooter Willis; Janelle L Lauer; Rachelle R Landgraf; Graham M West; David Marciano; Scott Novick; Devrishi Goswami; Michael J Chalmers; Patrick R Griffin
Journal:  J Am Soc Mass Spectrom       Date:  2012-06-13       Impact factor: 3.109

5.  Mapping residual structure in intrinsically disordered proteins at residue resolution using millisecond hydrogen/deuterium exchange and residue averaging.

Authors:  Theodore R Keppel; David D Weis
Journal:  J Am Soc Mass Spectrom       Date:  2014-12-07       Impact factor: 3.109

6.  Structure of the intact PPAR-gamma-RXR- nuclear receptor complex on DNA.

Authors:  Vikas Chandra; Pengxiang Huang; Yoshitomo Hamuro; Srilatha Raghuram; Yongjun Wang; Thomas P Burris; Fraydoon Rastinejad
Journal:  Nature       Date:  2008-11-20       Impact factor: 49.962

7.  Isoform-specific amino-terminal domains dictate DNA-binding properties of ROR alpha, a novel family of orphan hormone nuclear receptors.

Authors:  V Giguère; M Tini; G Flock; E Ong; R M Evans; G Otulakowski
Journal:  Genes Dev       Date:  1994-03-01       Impact factor: 11.361

8.  A validated regulatory network for Th17 cell specification.

Authors:  Maria Ciofani; Aviv Madar; Carolina Galan; Maclean Sellars; Kieran Mace; Florencia Pauli; Ashish Agarwal; Wendy Huang; Christopher N Parkhurst; Michael Muratet; Kim M Newberry; Sarah Meadows; Alex Greenfield; Yi Yang; Preti Jain; Francis K Kirigin; Carmen Birchmeier; Erwin F Wagner; Kenneth M Murphy; Richard M Myers; Richard Bonneau; Dan R Littman
Journal:  Cell       Date:  2012-09-25       Impact factor: 41.582

9.  DNA binding alters coactivator interaction surfaces of the intact VDR-RXR complex.

Authors:  Jun Zhang; Michael J Chalmers; Keith R Stayrook; Lorri L Burris; Yongjun Wang; Scott A Busby; Bruce D Pascal; Ruben D Garcia-Ordonez; John B Bruning; Monica A Istrate; Douglas J Kojetin; Jeffrey A Dodge; Thomas P Burris; Patrick R Griffin
Journal:  Nat Struct Mol Biol       Date:  2011-04-10       Impact factor: 15.369

10.  Induction and molecular signature of pathogenic TH17 cells.

Authors:  Youjin Lee; Amit Awasthi; Nir Yosef; Francisco J Quintana; Sheng Xiao; Anneli Peters; Chuan Wu; Markus Kleinewietfeld; Sharon Kunder; David A Hafler; Raymond A Sobel; Aviv Regev; Vijay K Kuchroo
Journal:  Nat Immunol       Date:  2012-09-09       Impact factor: 25.606

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.