Literature DB >> 34545238

Evolution and progression of Barrett's oesophagus to oesophageal cancer.

Sarah Killcoyne1,2, Rebecca C Fitzgerald3.   

Abstract

Cancer cells are shaped through an evolutionary process of DNA mutation, cell selection and population expansion. Early steps in this process are driven by a set of mutated driver genes and structural alterations to the genome through copy number gains or losses. Oesophageal adenocarcinoma (EAC) and the pre-invasive tissue, Barrett's oesophagus (BE), provide an ideal example in which to observe and study this evolution. BE displays early genomic instability, specifically in copy number changes that may later be observed in EAC. Furthermore, these early changes result in patterns of progression (that is, 'born bad', gradual or catastrophic) that may help to describe the evolution of EAC. As only a small proportion of patients with BE will go on to develop cancer, a better understanding of these patterns and the resulting genomic changes should improve early detection in EAC and may provide clues for the evolution of cancer more broadly.
© 2021. Springer Nature Limited.

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Year:  2021        PMID: 34545238     DOI: 10.1038/s41568-021-00400-x

Source DB:  PubMed          Journal:  Nat Rev Cancer        ISSN: 1474-175X            Impact factor:   60.716


  112 in total

1.  Genome-wide quantification of rare somatic mutations in normal human tissues using massively parallel sequencing.

Authors:  Margaret L Hoang; Isaac Kinde; Cristian Tomasetti; K Wyatt McMahon; Thomas A Rosenquist; Arthur P Grollman; Kenneth W Kinzler; Bert Vogelstein; Nickolas Papadopoulos
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-15       Impact factor: 11.205

2.  Tumor evolution. High burden and pervasive positive selection of somatic mutations in normal human skin.

Authors:  Iñigo Martincorena; Amit Roshan; Moritz Gerstung; Peter Ellis; Peter Van Loo; Stuart McLaren; David C Wedge; Anthony Fullam; Ludmil B Alexandrov; Jose M Tubio; Lucy Stebbings; Andrew Menzies; Sara Widaa; Michael R Stratton; Philip H Jones; Peter J Campbell
Journal:  Science       Date:  2015-05-22       Impact factor: 47.728

3.  Whole-genome sequencing provides new insights into the clonal architecture of Barrett's esophagus and esophageal adenocarcinoma.

Authors:  Caryn S Ross-Innes; Jennifer Becq; Andrew Warren; R Keira Cheetham; Helen Northen; Maria O'Donovan; Shalini Malhotra; Massimiliano di Pietro; Sergii Ivakhno; Miao He; Jamie M J Weaver; Andy G Lynch; Zoya Kingsbury; Mark Ross; Sean Humphray; David Bentley; Rebecca C Fitzgerald
Journal:  Nat Genet       Date:  2015-07-20       Impact factor: 38.330

4.  Pan-cancer patterns of somatic copy number alteration.

Authors:  Travis I Zack; Stephen E Schumacher; Scott L Carter; Andre D Cherniack; Gordon Saksena; Barbara Tabak; Michael S Lawrence; Cheng-Zhong Zhsng; Jeremiah Wala; Craig H Mermel; Carrie Sougnez; Stacey B Gabriel; Bryan Hernandez; Hui Shen; Peter W Laird; Gad Getz; Matthew Meyerson; Rameen Beroukhim
Journal:  Nat Genet       Date:  2013-10       Impact factor: 38.330

5.  Patterns of somatic structural variation in human cancer genomes.

Authors:  Yilong Li; Nicola D Roberts; Jeremiah A Wala; Ofer Shapira; Steven E Schumacher; Kiran Kumar; Ekta Khurana; Sebastian Waszak; Jan O Korbel; James E Haber; Marcin Imielinski; Joachim Weischenfeldt; Rameen Beroukhim; Peter J Campbell
Journal:  Nature       Date:  2020-02-05       Impact factor: 49.962

6.  The evolutionary history of 2,658 cancers.

Authors:  Moritz Gerstung; Clemency Jolly; Ignaty Leshchiner; Stefan C Dentro; Santiago Gonzalez; Daniel Rosebrock; Thomas J Mitchell; Yulia Rubanova; Pavana Anur; Kaixian Yu; Maxime Tarabichi; Amit Deshwar; Jeff Wintersinger; Kortine Kleinheinz; Ignacio Vázquez-García; Kerstin Haase; Lara Jerman; Subhajit Sengupta; Geoff Macintyre; Salem Malikic; Nilgun Donmez; Dimitri G Livitz; Marek Cmero; Jonas Demeulemeester; Steven Schumacher; Yu Fan; Xiaotong Yao; Juhee Lee; Matthias Schlesner; Paul C Boutros; David D Bowtell; Hongtu Zhu; Gad Getz; Marcin Imielinski; Rameen Beroukhim; S Cenk Sahinalp; Yuan Ji; Martin Peifer; Florian Markowetz; Ville Mustonen; Ke Yuan; Wenyi Wang; Quaid D Morris; Paul T Spellman; David C Wedge; Peter Van Loo
Journal:  Nature       Date:  2020-02-06       Impact factor: 49.962

7.  The repertoire of mutational signatures in human cancer.

Authors:  Ludmil B Alexandrov; Jaegil Kim; Gad Getz; Steven G Rozen; Michael R Stratton; Nicholas J Haradhvala; Mi Ni Huang; Alvin Wei Tian Ng; Yang Wu; Arnoud Boot; Kyle R Covington; Dmitry A Gordenin; Erik N Bergstrom; S M Ashiqul Islam; Nuria Lopez-Bigas; Leszek J Klimczak; John R McPherson; Sandro Morganella; Radhakrishnan Sabarinathan; David A Wheeler; Ville Mustonen
Journal:  Nature       Date:  2020-02-05       Impact factor: 49.962

8.  Somatic mutations and clonal dynamics in healthy and cirrhotic human liver.

Authors:  Simon F Brunner; Nicola D Roberts; Luke A Wylie; Luiza Moore; Sarah J Aitken; Susan E Davies; Mathijs A Sanders; Pete Ellis; Chris Alder; Yvette Hooks; Federico Abascal; Michael R Stratton; Inigo Martincorena; Matthew Hoare; Peter J Campbell
Journal:  Nature       Date:  2019-10-23       Impact factor: 49.962

9.  Deciphering signatures of mutational processes operative in human cancer.

Authors:  Ludmil B Alexandrov; Serena Nik-Zainal; David C Wedge; Peter J Campbell; Michael R Stratton
Journal:  Cell Rep       Date:  2013-01-10       Impact factor: 9.423

10.  Population dynamics of normal human blood inferred from somatic mutations.

Authors:  Henry Lee-Six; Nina Friesgaard Øbro; Mairi S Shepherd; Sebastian Grossmann; Kevin Dawson; Miriam Belmonte; Robert J Osborne; Brian J P Huntly; Inigo Martincorena; Elizabeth Anderson; Laura O'Neill; Michael R Stratton; Elisa Laurenti; Anthony R Green; David G Kent; Peter J Campbell
Journal:  Nature       Date:  2018-09-05       Impact factor: 49.962

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  3 in total

1.  Expression of DNA Mismatch Repair Proteins, PD1 and PDL1 in Barrett's Neoplasia.

Authors:  James J Saller; Linda B Mora; Aejaz Nasir; Zachary Mayer; Mohammad Shahid; Domenico Coppola
Journal:  Cancer Genomics Proteomics       Date:  2022 Mar-Apr       Impact factor: 4.069

Review 2.  Unravelling the tumour genome: The evolutionary and clinical impacts of structural variants in tumourigenesis.

Authors:  Alhafidz Hamdan; Ailith Ewing
Journal:  J Pathol       Date:  2022-04-28       Impact factor: 9.883

3.  Characterizing isoform switching events in esophageal adenocarcinoma.

Authors:  Yun Zhang; Katherine M Weh; Connor L Howard; Jean-Jack Riethoven; Jennifer L Clarke; Kiran H Lagisetty; Jules Lin; Rishindra M Reddy; Andrew C Chang; David G Beer; Laura A Kresty
Journal:  Mol Ther Nucleic Acids       Date:  2022-08-17       Impact factor: 10.183

  3 in total

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