| Literature DB >> 34544443 |
Yu Zhou1, Shasha Wang1, Yunxia Tao1, Haizhu Chen1, Yan Qin1, Xiaohui He1, Shengyu Zhou1, Peng Liu1, Jianliang Yang1, Sheng Yang1, Lin Gui1, Ning Lou1, Zhishang Zhang1, Jiarui Yao1, Xiaohong Han2, Yuankai Shi3.
Abstract
BACKGROUND: This study aimed to recognize the hub genes associated with prognosis in follicular lymphoma (FL) treated with first-line rituximab combined with chemotherapy.Entities:
Keywords: CCL19; Chemokine; Follicular lymphoma; Prognosis; Survival outcome
Mesh:
Substances:
Year: 2021 PMID: 34544443 PMCID: PMC8454033 DOI: 10.1186/s12967-021-03078-9
Source DB: PubMed Journal: J Transl Med ISSN: 1479-5876 Impact factor: 5.531
Fig. 1Differential expression profile and enrichment analysis result of GSE65135. A Volcano plot of all differentially expressed genes (DEGs); B Heatmap of all DEGs between 14 tumor samples (red) and 10 normal samples (blue); C Top 10 Gene Ontology (GO) terms of upregulated DEGs; D Top 10 GO terms of downregulated DEGs; E Top 10 Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways of upregulated DEGs; F Top 10 KEGG pathways of downregulated DEGs
Fig. 2Weighted gene co-expression network analysis (WGCNA) for all DEGs identified from GSE65135. A Hierarchical cluster tree of co-expression modules identified by WGCNA. B Heatmap of topological overlap matrix (TOM); C Relationship of modules and cancer
Fig. 3Kaplan–Meier survival analysis and multivariate analysis of hub genes in GSE119214. A PLA2G2D; B MMP9; C PTGDS; D CCL19; E NFIB; F YAP1; G RGL1; H TIMP3; I forest plot of multivariate Cox analysis result
Fig. 4Box plots of CCL19 mRNA expression in Oncomine database comparing follicular lymphoma and normal tissue (A–D)
Fig. 5The correlation of CCL19 concentration with clinical characteristics and survival outcomes in CHCAMS cohort. Concentration of serum CCL19 among difference age groups (A), different FLIPI groups (B) and different rituximab maintenance groups (C). Kaplan–Meier curves of CCL19 concentration with D progression-free survival and E overall survival. FLIPI: Follicular Lymphoma International Prognostic Index; PFS: progression-free survival; OS: overall survival
Fig. 6Results of tumor-infiltrating immune cell analysis using CIBERSORT. A The proportion of tumor-infiltrating immune cell (TIIC) in CCL19 low-expression (above) and high-expression (below) groups. B Correlation of TIIC subtypes and CCL19 expression. TIIC: tumor-infiltrating immune cell