Literature DB >> 34543911

Decomposing normal and abnormal features of medical images for content-based image retrieval of glioma imaging.

Kazuma Kobayashi1, Ryuichiro Hataya2, Yusuke Kurose3, Mototaka Miyake4, Masamichi Takahashi5, Akiko Nakagawa6, Tatsuya Harada7, Ryuji Hamamoto8.   

Abstract

In medical imaging, the characteristics purely derived from a disease should reflect the extent to which abnormal findings deviate from the normal features. Indeed, physicians often need corresponding images without abnormal findings of interest or, conversely, images that contain similar abnormal findings regardless of normal anatomical context. This is called comparative diagnostic reading of medical images, which is essential for a correct diagnosis. To support comparative diagnostic reading, content-based image retrieval (CBIR) that can selectively utilize normal and abnormal features in medical images as two separable semantic components will be useful. In this study, we propose a neural network architecture to decompose the semantic components of medical images into two latent codes: normal anatomy code and abnormal anatomy code. The normal anatomy code represents counterfactual normal anatomies that should have existed if the sample is healthy, whereas the abnormal anatomy code attributes to abnormal changes that reflect deviation from the normal baseline. By calculating the similarity based on either normal or abnormal anatomy codes or the combination of the two codes, our algorithm can retrieve images according to the selected semantic component from a dataset consisting of brain magnetic resonance images of gliomas. Moreover, it can utilize a synthetic query vector combining normal and abnormal anatomy codes from two different query images. To evaluate whether the retrieved images are acquired according to the targeted semantic component, the overlap of the ground-truth labels is calculated as metrics of the semantic consistency. Our algorithm provides a flexible CBIR framework by handling the decomposed features with qualitatively and quantitatively remarkable results.
Copyright © 2021 The Author(s). Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  comparative diagnostic reading; content-based image retrieval; deep learning; disentangled representation; feature decomposition

Mesh:

Year:  2021        PMID: 34543911     DOI: 10.1016/j.media.2021.102227

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  2 in total

Review 1.  Application of non-negative matrix factorization in oncology: one approach for establishing precision medicine.

Authors:  Ryuji Hamamoto; Ken Takasawa; Hidenori Machino; Kazuma Kobayashi; Satoshi Takahashi; Amina Bolatkan; Norio Shinkai; Akira Sakai; Rina Aoyama; Masayoshi Yamada; Ken Asada; Masaaki Komatsu; Koji Okamoto; Hirokazu Kameoka; Syuzo Kaneko
Journal:  Brief Bioinform       Date:  2022-07-18       Impact factor: 13.994

2.  Effective CBMIR System Using Hybrid Features-Based Independent Condensed Nearest Neighbor Model.

Authors:  Hirald Dwaraka Praveena; Nirmala S Guptha; Afsaneh Kazemzadeh; B D Parameshachari; K L Hemalatha
Journal:  J Healthc Eng       Date:  2022-03-26       Impact factor: 2.682

  2 in total

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