Literature DB >> 34543435

The utility of color normalization for AI-based diagnosis of hematoxylin and eosin-stained pathology images.

Jeffrey Boschman1, Hossein Farahani1,2, Amirali Darbandsari3, Pouya Ahmadvand1, Ashley Van Spankeren1, David Farnell2,4, Adrian B Levine2,4, Julia R Naso2,4, Andrew Churg2,4, Steven Jm Jones5, Stephen Yip2,4, Martin Köbel6, David G Huntsman2,5, C Blake Gilks2,4, Ali Bashashati1,2.   

Abstract

The color variation of hematoxylin and eosin (H&E)-stained tissues has presented a challenge for applications of artificial intelligence (AI) in digital pathology. Many color normalization algorithms have been developed in recent years in order to reduce the color variation between H&E images. However, previous efforts in benchmarking these algorithms have produced conflicting results and none have sufficiently assessed the efficacy of the various color normalization methods for improving diagnostic performance of AI systems. In this study, we systematically investigated eight color normalization algorithms for AI-based classification of H&E-stained histopathology slides, in the context of using images both from one center and from multiple centers. Our results show that color normalization does not consistently improve classification performance when both training and testing data are from a single center. However, using four multi-center datasets of two cancer types (ovarian and pleural) and objective functions, we show that color normalization can significantly improve the classification accuracy of images from external datasets (ovarian cancer: 0.25 AUC increase, p = 1.6 e-05; pleural cancer: 0.21 AUC increase, p = 1.4 e-10). Furthermore, we introduce a novel augmentation strategy by mixing color-normalized images using three easily accessible algorithms that consistently improves the diagnosis of test images from external centers, even when the individual normalization methods had varied results. We anticipate our study to be a starting point for reliable use of color normalization to improve AI-based, digital pathology-empowered diagnosis of cancers sourced from multiple centers.
© 2021 The Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd. © 2021 The Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd.

Entities:  

Keywords:  artificial intelligence; color normalization; digital image analysis; digital pathology; machine learning; stain normalization

Mesh:

Substances:

Year:  2021        PMID: 34543435     DOI: 10.1002/path.5797

Source DB:  PubMed          Journal:  J Pathol        ISSN: 0022-3417            Impact factor:   7.996


  2 in total

1.  Stain normalization in digital pathology: Clinical multi-center evaluation of image quality.

Authors:  Nicola Michielli; Alessandro Caputo; Manuela Scotto; Alessandro Mogetta; Orazio Antonino Maria Pennisi; Filippo Molinari; Davide Balmativola; Martino Bosco; Alessandro Gambella; Jasna Metovic; Daniele Tota; Laura Carpenito; Paolo Gasparri; Massimo Salvi
Journal:  J Pathol Inform       Date:  2022-09-24

2.  Computational tumor stroma reaction evaluation led to novel prognosis-associated fibrosis and molecular signature discoveries in high-grade serous ovarian carcinoma.

Authors:  Jun Jiang; Burak Tekin; Lin Yuan; Sebastian Armasu; Stacey J Winham; Ellen L Goode; Hongfang Liu; Yajue Huang; Ruifeng Guo; Chen Wang
Journal:  Front Med (Lausanne)       Date:  2022-09-07
  2 in total

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