Literature DB >> 34541162

Isolation of Guard-cell Enriched Tissue for RNA Extraction.

Pirko Jalakas1, Dmitry Yarmolinsky1, Hannes Kollist1, Mikael Brosché1,2.   

Abstract

This is a protocol for isolation of guard cell enriched samples from Arabidopsis thaliana plants for RNA extraction. Leaves are blended in ice-water and filtered through nylon mesh to obtain guard cell enriched fragments. With guard cell enriched samples, gene expression analysis can be done, e.g., comparing different gene expression levels in guard cells versus whole leaf to determine if a gene of interest is predominantly expressed in guard cells. It can also be used to study the effect of treatments or different genetic backgrounds in the regulation of the guard cell expressed genes.
Copyright © 2017 The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Keywords:  Arabidopsis thaliana; Guard cell isolation; RNA

Year:  2017        PMID: 34541162      PMCID: PMC8413638          DOI: 10.21769/BioProtoc.2447

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  5 in total

1.  The Role of ENHANCED RESPONSES TO ABA1 (ERA1) in Arabidopsis Stomatal Responses Is Beyond ABA Signaling.

Authors:  Pirko Jalakas; Yi-Chun Huang; Yu-Hung Yeh; Laurent Zimmerli; Ebe Merilo; Hannes Kollist; Mikael Brosché
Journal:  Plant Physiol       Date:  2017-03-22       Impact factor: 8.340

2.  Microarray expression analyses of Arabidopsis guard cells and isolation of a recessive abscisic acid hypersensitive protein phosphatase 2C mutant.

Authors:  Nathalie Leonhardt; June M Kwak; Nadia Robert; David Waner; Guillaume Leonhardt; Julian I Schroeder
Journal:  Plant Cell       Date:  2004-02-18       Impact factor: 11.277

3.  Boolean modeling of transcriptome data reveals novel modes of heterotrimeric G-protein action.

Authors:  Sona Pandey; Rui-Sheng Wang; Liza Wilson; Song Li; Zhixin Zhao; Timothy E Gookin; Sarah M Assmann; Réka Albert
Journal:  Mol Syst Biol       Date:  2010-06-08       Impact factor: 11.429

4.  The stomatal response to reduced relative humidity requires guard cell-autonomous ABA synthesis.

Authors:  Hubert Bauer; Peter Ache; Silke Lautner; Joerg Fromm; Wolfram Hartung; Khaled A S Al-Rasheid; Sophia Sonnewald; Uwe Sonnewald; Susanne Kneitz; Nicole Lachmann; Ralf R Mendel; Florian Bittner; Alistair M Hetherington; Rainer Hedrich
Journal:  Curr Biol       Date:  2012-12-06       Impact factor: 10.834

5.  A comparative study of the Arabidopsis thaliana guard-cell transcriptome and its modulation by sucrose.

Authors:  George W Bates; David M Rosenthal; Jindong Sun; Maitreyi Chattopadhyay; Emily Peffer; Jing Yang; Donald R Ort; Alan M Jones
Journal:  PLoS One       Date:  2012-11-21       Impact factor: 3.240

  5 in total
  1 in total

1.  Jasmonic acid and salicylic acid play minor roles in stomatal regulation by CO2 , abscisic acid, darkness, vapor pressure deficit and ozone.

Authors:  Olena Zamora; Sebastian Schulze; Tamar Azoulay-Shemer; Helen Parik; Jaanika Unt; Mikael Brosché; Julian I Schroeder; Dmitry Yarmolinsky; Hannes Kollist
Journal:  Plant J       Date:  2021-08-14       Impact factor: 7.091

  1 in total

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