Literature DB >> 34541157

Separation and Purification of Glycosaminoglycans (GAGs) from Caenorhabditis elegans.

Tabea Dierker1, Lena Kjellén1.   

Abstract

The nematode Caenorhabditis elegans is a popular model organism for studies of developmental biology, neurology, ageing and other fields of basic research. Because many developmental processes are regulated by glycosaminoglyans (GAGs) on cell surfaces and in the extracellular matrix, methods to isolate and analyze C. elegans GAGs are needed. Such methods have previously been optimized for other species such as mice and zebrafish. After modifying existing purification protocols, we could recently show that the nematodes also produce chondroitin sulfate, in addition to heparan sulfate, thus challenging the view that only non-sulfated chondroitin was synthesized by C. elegans. We here present our protocol adapted for C. elegans. Since the purification strategy involves separation of non-sulfated and sulfated GAGs, it may also be useful for other applications where this approach could be advantageous.
Copyright © 2017 The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Keywords:  Caenorhabditis elegans; Glycosaminoglycans; Ion exchange chromatography; Proteoglycans; Sulfation

Year:  2017        PMID: 34541157      PMCID: PMC8413556          DOI: 10.21769/BioProtoc.2437

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  14 in total

1.  Structural analysis of glycosaminoglycans in Drosophila and Caenorhabditis elegans and demonstration that tout-velu, a Drosophila gene related to EXT tumor suppressors, affects heparan sulfate in vivo.

Authors:  H Toyoda; A Kinoshita-Toyoda; S B Selleck
Journal:  J Biol Chem       Date:  2000-01-28       Impact factor: 5.157

2.  Evolution of glycosaminoglycans: Comparative biochemical study.

Authors:  Shuhei Yamada; Kazuyuki Sugahara; Suat Ozbek
Journal:  Commun Integr Biol       Date:  2011-03

3.  Lowered expression of heparan sulfate/heparin biosynthesis enzyme N-deacetylase/n-sulfotransferase 1 results in increased sulfation of mast cell heparin.

Authors:  Anders Dagälv; Katarina Holmborn; Lena Kjellén; Magnus Abrink
Journal:  J Biol Chem       Date:  2011-11-02       Impact factor: 5.157

4.  Genetic analysis of the heparan modification network in Caenorhabditis elegans.

Authors:  Robert A Townley; Hannes E Bülow
Journal:  J Biol Chem       Date:  2011-03-24       Impact factor: 5.157

5.  Demonstration of glycosaminoglycans in Caenorhabditis elegans.

Authors:  S Yamada; I Van Die; D H Van den Eijnden; A Yokota; H Kitagawa; K Sugahara
Journal:  FEBS Lett       Date:  1999-10-15       Impact factor: 4.124

Review 6.  Glycosaminoglycan (GAG) biosynthesis and GAG-binding proteins.

Authors:  Lijuan Zhang
Journal:  Prog Mol Biol Transl Sci       Date:  2010       Impact factor: 3.622

7.  Mass spectral profiling of glycosaminoglycans from histological tissue surfaces.

Authors:  Chun Shao; Xiaofeng Shi; Joanna J Phillips; Joseph Zaia
Journal:  Anal Chem       Date:  2013-10-29       Impact factor: 6.986

Review 8.  Heparan sulphate proteoglycans fine-tune mammalian physiology.

Authors:  Joseph R Bishop; Manuela Schuksz; Jeffrey D Esko
Journal:  Nature       Date:  2007-04-26       Impact factor: 49.962

9.  On the roles and regulation of chondroitin sulfate and heparan sulfate in zebrafish pharyngeal cartilage morphogenesis.

Authors:  Katarina Holmborn; Judith Habicher; Zsolt Kasza; Anna S Eriksson; Beata Filipek-Gorniok; Sandeep Gopal; John R Couchman; Per E Ahlberg; Malgorzata Wiweger; Dorothe Spillmann; Johan Kreuger; Johan Ledin
Journal:  J Biol Chem       Date:  2012-08-06       Impact factor: 5.157

10.  Nematodes join the family of chondroitin sulfate-synthesizing organisms: Identification of an active chondroitin sulfotransferase in Caenorhabditis elegans.

Authors:  Tabea Dierker; Chun Shao; Tatjana Haitina; Joseph Zaia; Andrea Hinas; Lena Kjellén
Journal:  Sci Rep       Date:  2016-10-05       Impact factor: 4.379

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