| Literature DB >> 34539750 |
Jianhui Sun1, Huacai Zhang1, Di Liu1, Li Cui1, Qiang Wang2, Lebin Gan1,2, Dalin Wen1, Jun Wang2, Juan Du1, Hong Huang1, Anqiang Zhang1, Jin Deng2, Jianxin Jiang1, Ling Zeng1.
Abstract
PURPOSE: CXC chemokines are mediators which mediate immune cells migration to sites of inflammation and injury. Chemokine C-X-C motif ligand 16 (CXCL16) plays an important role in the occurrence and development of sepsis through leukocyte chemotaxis, leukocyte adhesion and endotoxin clearance. In this study, we selected a set of tagging single nucleotide polymorphisms (tag SNPs) in the CXCL16 gene and investigated their clinical relevance to the development of sepsis and multiple organ dysfunction syndrome (MODS) in patients with major trauma in three independent Chinese Han populations.Entities:
Keywords: CXCL16; multiple organ dysfunction; sepsis; single nucleotide polymorphisms; trauma
Year: 2021 PMID: 34539750 PMCID: PMC8446271 DOI: 10.3389/fgene.2021.720313
Source DB: PubMed Journal: Front Genet ISSN: 1664-8021 Impact factor: 4.599
FIGURE 2T123V181 haplotype enhances the chemotaxis and adhesion of inflammatory cells. (A) Map of the CXCL16 expression plasmid. (B) Schematic diagram of the chemotactic assay. The percentage of THP-1 cells recruited to the lower chamber was calculated to represent chemotaxis. (C) The chemotaxis of the CXCL16-T123V181 protein was significantly higher than that of the other three proteins (**P < 0.01). (D) The percentage of THP-1 cells with green fluorescence expressing transmembrane forms of CXCL16-T123V181 protein attached to RAW264.7 cells was calculated to represent the adhesion ability. (E) The adhesion ability of cells expressing CXCL16-T123V181 protein was significantly higher than that of the other three proteins (**P < 0.01).
FIGURE 1Overview of tagging single nucleotide polymorphisms (tag SNPs) in the CXCL16 gene. (A) CXCL16 gene organization and the location of two missense mutations, I123T (rs1050998) and A181V (rs2277680), on chromosome 17. (B) Location of SNPs in the CXCL16 gene with a minor allele frequency ≥5%. A linkage disequilibrium (LD) plot of these SNPs is displayed by a color scheme. Black represents very high LD (r2 = 1.0), and white indicates the absence of correlation (r2 = 0) between two SNPs. The r2 between I123T and A181V is 1.0.
Overall clinical characteristics of patients with major trauma.
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| Age (years) | 43.5 ± 15.1 (18-65) | 42.5 ± 12.0(19–62) | 37.6 ± 12.5 (18–65) |
| Male/female, n | 681/239 | 268/82 | 273/77 |
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| Head, n | 475(51.6) | 224 (64.0) | 207 (59.1) |
| Thorax, n | 536(58.2) | 216 (61.7) | 198 (56.6) |
| Abdomen, n | 381(41.4) | 129 (36.9) | 116 (33.1) |
| Extremities, n | 416(45.2) | 198 (56.6) | 187 (53.4) |
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| One, n | 461 (50.1) | 151(43.1) | 146(41.7) |
| Two, n | 292 (31.7) | 132 (37.7) | 129 (36.9) |
| Three or above, n | 167 (18.2) | 67 (19.1) | 75 (21.4) |
| ISS | 23.4 ± 9.8 | 22.4 ± 8.1 | 21.5 ± 9.1 |
| ≥16, <25, n (%) | 567 (61.6) | 201 (57.4) | 221(63.1) |
| ≥25, n (%) | 353 (38.7) | 149 (42.6) | 129(36.9) |
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| One, n | 281 (32.2) | 112 (32.9) | 125 (34.1) |
| Two, n | 121 (14.5) | 56(16.5) | 51(13.9) |
| Three or above, n | 41 (4.9) | 23(6.8) | 35(9.5) |
| Sepsis, n (%) | 347 (37.7) | 118 (33.7) | 132(37.7) |
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| Respiratory tract infection | 42.3 | 40.5 | 42.8 |
| Primary bloodstream infection | 22.1 | 22.9 | 20.3 |
| Urinary tract infection | 15.0 | 12.5 | 13.1 |
| Catheter associated infection | 10.6 | 8.2 | 9.5 |
| Wound infection | 7.3 | 8.8 | 10.2 |
| Others* | 2.7 | 7.1 | 4.1 |
Distribution of haplotypes of CXCL16 I123T and A181V among trauma patients in three cohorts.
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| Chongqing | 548 (59.57) | 3 (0.33) | 1 (0.11) | 368 (40.0) |
| Zhejiang | 182 (52.0) | 0 (0) | 1 (0.29) | 167 (47.71) |
| Guizhou | 176 (50.29) | 2 (0.57) | 0 (0) | 172 (49.14) |
Haplotype effects of the I123T and A181V polymorphisms on the incidence of sepsis among trauma patients in three cohorts.
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| Chongqing | I123A181 | 548 | 44.2 ± 12.9 | 379/136 | 22.6 ± 9.3 | 181(33.0%) a1 | 6.3 ± 2.5b1 5 |
| I123V181 | 3 | 43.5 ± 13.7 | 2/1 | 21.5 ± 5.7 | 0(%) | 6.6 ± 1.3 | |
| T123A181 | 1 | 48.0 | 1/0 | 20.0 | 0(%) | 7 | |
| T123V181 | 368 | 43.7 ± 13.3 | 299/102 | 21.6 ± 9.4 | 166(45.1%) | 7.8 ± 2.7 | |
| Zhejiang | I123A181 | 182 | 42.6 ± 11.8 | 138/44 | 22.3 ± 7.1 | 49(26.9%) a2 | 6.7 ± 3.0b2 |
| I123V181 | 0 | – | – | – | – | – | |
| T123A181 | 1 | 46 | 1/0 | 22.0 | 1(100%) | 7.0 | |
| T123V181 | 167 | 43.5 ± 14.7 | 129/38 | 19.7 ± 7.5 | 68(40.7%) | 8.1 ± 2.9 | |
| Guizhou | I123A181 | 176 | 37.4 ± 12.5 | 141/42 | 22.8 ± 9.2 | 45(25.6%) a3 | 6.9 ± 2.5b3 |
| I123V181 | 2 | 38.5 ± 12.0 | 2/0 | 21.5 ± 3.0 | 0(%) | 7.5 ± 2.6 | |
| T123A181 | 0 | – | – | – | – | – | |
| T123V181 | 172 | 39.8 ± 11.9 | 130/35 | 22.6 ± 8.9 | 87(50.6%) | 8.5 ± 2.9 |
FIGURE 3Conservative analysis and molecular modeling of I123T and A181V. (A) Conservative analysis shows that the two missense mutations are both located in the non-conserved region of the CXCL16 gene. (B) The structural diagram shows that the active center of the CXCL16 protein was changed by V → A substitution, which might make the active center of the CXCL16 protein smaller.