| Literature DB >> 34536493 |
Massimo Pettoello-Mantovani1, Angel Carrasco-Sanz2, Gottfried Huss3, Julije Mestrovic4, Mehmet Vural5, Tudor Lucian Pop6, Pietro Ferrara7, Eli Somekh8, Aida Mujkic4, Hilary Hoey9, Leyla Namazova-Baranova10.
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Year: 2021 PMID: 34536493 PMCID: PMC8442301 DOI: 10.1016/j.jpeds.2021.09.013
Source DB: PubMed Journal: J Pediatr ISSN: 0022-3476 Impact factor: 4.406
SARS-CoV-2 VOC and VOI (September 2021)
| WHO labels | Pango lineage | GISAID clade | Nextstrain clade | Additional amino acid changes shown | Earliest documented samples | Date of designation |
|---|---|---|---|---|---|---|
| Currently designated VOC | ||||||
| Alpha | B.1.1.7 | GRY | 20I (V1) | +S:484K//+S:452R | United Kingdom, 09/2020 | 18/12/2020 |
| Beta | B.1.351 | GH/501Y.V2 | 20H (V2) | +S:L18F | South Africa, 05/2020 | 12/18/2020 |
| Gamma | P.1 | GR/501Y.V3 | 20J (V3) | +S:681H | Brazil, 11/2020 | 11/01/2021 |
| Delta | B.1.617.2 | G/478K.V1 | 21A | +S:417N | India, 10/2020 | VOI: 04/04/2021 |
| Currently designated VOI | ||||||
| Eta | B.1.525 | G/484K.V3 | 21D | – | Multiple countries, 12/2020 | 3/17/2021 |
| Iota | B.1.526 | GH/253G.V1 | 21F | – | US, 11/2020 | 3/24/2021 |
| Kappa | B.1.526 | G/452R.V3 | 21B | – | India, 10/2020 | 4/4/2021 |
| Lambda | B.1.526 | GR/452Q.V1 | 21G | – | Peru, 12/2020 | 6/14/2021 |
| Lambda | B.1.526 | GH | 21H | – | Colombia, 01/2021 | 8/30/2021 |
VOC, variants of concern; VOI, variants of interest; WHO, World Health Organization.
Pango lineage: The Phylogenetic Assignment of Named Global Outbreak Lineages (PANGOLIN) is a software tool developed by members of the laboratory of Andrew Rambaut, with an associated web application developed by the Centre for Genomic Pathogen Surveillance in South.
GISAID clade: Global initiative on sharing avian influenza data (GISAID) (https://www.gisaid.org/about-us/mission/).
Nextstrain clade: Nextstrain is an open-source project to harness the scientific and public health potential of pathogen genome data (https://nextstrain.org/).