Literature DB >> 34532515

CRISPR/Cas9-mediated ssDNA Recombineering in Corynebacterium glutamicum.

Jiao Liu1,2, Yu Wang1,2, Ping Zheng1,2, Jibin Sun1,2.   

Abstract

Corynebacterium glutamicum is a versatile workhorse for industrial bioproduction of many kinds of chemicals and fuels, notably amino acids. Development of advanced genetic engineering tools is urgently demanded for systems metabolic engineering of C. glutamicum. Recently unveiled clustered regularly interspaced short palindromic repeats (CRISPR) and their CRISPR-associated proteins (Cas) are now revolutionizing genome editing. The CRISPR/Cas9 system from Streptococcus pyogenes that utilizes NGG as protospacer adjacent motif (PAM) and has good targeting specificity can be developed into a powerful tool for efficient and precise genome editing of C. glutamicum. In this protocol, we described the general procedure for CRISPR/Cas9-mediated ssDNA recombineering in C. glutamicum. Small modifications can be introduced into the C. glutamicum chromosome with a high editing efficiency up to 90%.
Copyright © 2018 The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Keywords:  CRISPR/Cas9; Corynebacterium glutamicum; Genome editing; Lagging strand; Nucleotide editing; ssDNA recombineering

Year:  2018        PMID: 34532515      PMCID: PMC8342094          DOI: 10.21769/BioProtoc.3038

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  11 in total

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Authors:  Alain A Vertès; Masayuki Inui; Hideaki Yukawa
Journal:  Appl Environ Microbiol       Date:  2005-12       Impact factor: 4.792

Review 2.  CRISPR technologies for bacterial systems: Current achievements and future directions.

Authors:  Kyeong Rok Choi; Sang Yup Lee
Journal:  Biotechnol Adv       Date:  2016-08-24       Impact factor: 14.227

3.  Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum.

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Journal:  Gene       Date:  1994-07-22       Impact factor: 3.688

4.  Improving the electro-transformation efficiency of Corynebacterium glutamicum by weakening its cell wall and increasing the cytoplasmic membrane fluidity.

Authors:  Yili Ruan; Linjiang Zhu; Qi Li
Journal:  Biotechnol Lett       Date:  2015-09-09       Impact factor: 2.461

5.  Functional expression of the genes of Escherichia coli in gram-positive Corynebacterium glutamicum.

Authors:  A Ozaki; R Katsumata; T Oka; A Furuya
Journal:  Mol Gen Genet       Date:  1984

Review 6.  The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins.

Authors:  Jörn Kalinowski; Brigitte Bathe; Daniela Bartels; Nicole Bischoff; Michael Bott; Andreas Burkovski; Nicole Dusch; Lothar Eggeling; Bernhard J Eikmanns; Lars Gaigalat; Alexander Goesmann; Michael Hartmann; Klaus Huthmacher; Reinhard Krämer; Burkhard Linke; Alice C McHardy; Folker Meyer; Bettina Möckel; Walter Pfefferle; Alfred Pühler; Daniel A Rey; Christian Rückert; Oliver Rupp; Hermann Sahm; Volker F Wendisch; Iris Wiegräbe; Andreas Tauch
Journal:  J Biotechnol       Date:  2003-09-04       Impact factor: 3.307

7.  MACBETH: Multiplex automated Corynebacterium glutamicum base editing method.

Authors:  Yu Wang; Ye Liu; Jiao Liu; Yanmei Guo; Liwen Fan; Xiaomeng Ni; Xiaomei Zheng; Meng Wang; Ping Zheng; Jibin Sun; Yanhe Ma
Journal:  Metab Eng       Date:  2018-03-24       Impact factor: 9.783

8.  Development of a CRISPR/Cas9 genome editing toolbox for Corynebacterium glutamicum.

Authors:  Jiao Liu; Yu Wang; Yujiao Lu; Ping Zheng; Jibin Sun; Yanhe Ma
Journal:  Microb Cell Fact       Date:  2017-11-16       Impact factor: 5.328

9.  Recombineering in Corynebacterium glutamicum combined with optical nanosensors: a general strategy for fast producer strain generation.

Authors:  Stephan Binder; Solvej Siedler; Jan Marienhagen; Michael Bott; Lothar Eggeling
Journal:  Nucleic Acids Res       Date:  2013-04-28       Impact factor: 16.971

10.  RNA-guided editing of bacterial genomes using CRISPR-Cas systems.

Authors:  Wenyan Jiang; David Bikard; David Cox; Feng Zhang; Luciano A Marraffini
Journal:  Nat Biotechnol       Date:  2013-01-29       Impact factor: 54.908

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