Literature DB >> 3453217

A multiple alignment program for protein sequences.

M Santibánez1, K Rohde.   

Abstract

A program for the multiple alignment of protein sequences is presented. The program is an extension of the fast alignment program by Wilbur et al. (1984) into higher dimensions. The use of hash procedures on fragments of the protein sequences increases the speed of calculation. Thereby we also take into account fragments which are present in some, but not in all, sequences considered. The results of some multiple alignments are given.

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Year:  1987        PMID: 3453217     DOI: 10.1093/bioinformatics/3.2.111

Source DB:  PubMed          Journal:  Comput Appl Biosci        ISSN: 0266-7061


  3 in total

1.  Consistency of optimal sequence alignments.

Authors:  O Gotoh
Journal:  Bull Math Biol       Date:  1990       Impact factor: 1.758

2.  Multiple sequence alignment with hierarchical clustering.

Authors:  F Corpet
Journal:  Nucleic Acids Res       Date:  1988-11-25       Impact factor: 16.971

3.  A flexible method to align large numbers of biological sequences.

Authors:  W R Taylor
Journal:  J Mol Evol       Date:  1988 Dec-1989 Feb       Impact factor: 2.395

  3 in total

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