Literature DB >> 34531921

Droplets take DNA by force.

Marina Feric1,2.   

Abstract

Single-molecule experiments can now quantify the surface forces that compete to package tethered DNA into a protein-rich condensate - providing much-needed mechanistic insight into the phase behaviour of the entangled genome in the nucleus.

Entities:  

Year:  2021        PMID： 34531921      PMCID： PMC8439160          DOI： 10.1038/s41567-021-01286-0

Source DB:  PubMed          Journal:  Nat Phys        ISSN： 1745-2473            Impact factor:   20.034


  9 in total

1.  Single kinesin molecules studied with a molecular force clamp.

Authors:  K Visscher; M J Schnitzer; S M Block
Journal:  Nature       Date:  1999-07-08       Impact factor: 49.962

Review 2.  Ten years of tension: single-molecule DNA mechanics.

Authors:  Carlos Bustamante; Zev Bryant; Steven B Smith
Journal:  Nature       Date:  2003-01-23       Impact factor: 49.962

3.  Human cohesin compacts DNA by loop extrusion.

Authors:  Yoori Kim; Zhubing Shi; Hongshan Zhang; Ilya J Finkelstein; Hongtao Yu
Journal:  Science       Date:  2019-11-28       Impact factor: 47.728

4.  Coactivator condensation at super-enhancers links phase separation and gene control.

Authors:  Benjamin R Sabari; Alessandra Dall'Agnese; Ann Boija; Isaac A Klein; Eliot L Coffey; Krishna Shrinivas; Brian J Abraham; Nancy M Hannett; Alicia V Zamudio; John C Manteiga; Charles H Li; Yang E Guo; Daniel S Day; Jurian Schuijers; Eliza Vasile; Sohail Malik; Denes Hnisz; Tong Ihn Lee; Ibrahim I Cisse; Robert G Roeder; Phillip A Sharp; Arup K Chakraborty; Richard A Young
Journal:  Science       Date:  2018-06-21       Impact factor: 47.728

Review 5.  Pioneer transcription factors: establishing competence for gene expression.

Authors:  Kenneth S Zaret; Jason S Carroll
Journal:  Genes Dev       Date:  2011-11-01       Impact factor: 11.361

Review 6.  Phase separation in genome organization across evolution.

Authors:  Marina Feric; Tom Misteli
Journal:  Trends Cell Biol       Date:  2021-03-23       Impact factor: 21.167

7.  Chromatin fibers stabilize nucleosomes under torsional stress.

Authors:  Artur Kaczmarczyk; He Meng; Orkide Ordu; John van Noort; Nynke H Dekker
Journal:  Nat Commun       Date:  2020-01-08       Impact factor: 14.919

8.  High-resolution dynamic mapping of histone-DNA interactions in a nucleosome.

Authors:  Michael A Hall; Alla Shundrovsky; Lu Bai; Robert M Fulbright; John T Lis; Michelle D Wang
Journal:  Nat Struct Mol Biol       Date:  2009-01-11       Impact factor: 15.369

9.  Organization of Chromatin by Intrinsic and Regulated Phase Separation.

Authors:  Bryan A Gibson; Lynda K Doolittle; Maximillian W G Schneider; Liv E Jensen; Nathan Gamarra; Lisa Henry; Daniel W Gerlich; Sy Redding; Michael K Rosen
Journal:  Cell       Date:  2019-09-19       Impact factor: 41.582
  9 in total
  1 in total

1.  Chromatin sequesters pioneer transcription factor Sox2 from exerting force on DNA.

Authors:  Tuan Nguyen; Sai Li; Jeremy T-H Chang; John W Watters; Htet Ng; Adewola Osunsade; Yael David; Shixin Liu
Journal:  Nat Commun       Date:  2022-07-09       Impact factor: 17.694
  1 in total

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