Literature DB >> 34529229

Genome Mining of Three Plant Growth-Promoting Bacillus Species from Maize Rhizosphere.

Oluwaseyi Samuel Olanrewaju1, Modupe Stella Ayilara1, Ayansina Segun Ayangbenro1, Olubukola Oluranti Babalola2.   

Abstract

Bacillus species genomes are rich in plant growth-promoting genetic elements. Bacillus subtilis and Bacillus velezensis are important plant growth promoters; hence, to further improve their abilities, the genetic elements responsible for these traits were characterized and reported. Genetic elements reported include those of auxin, nitrogen fixation, siderophore production, iron acquisition, volatile organic compounds, and antibiotics. Furthermore, the presence of phages and antibiotic-resistant genes in the genomes are reported. Pan-genome analysis was conducted using ten Bacillus species. From the analysis, pan-genome of Bacillus subtilis and Bacillus velezensis are still open. Ultimately, this study brings an insight into the genetic components of the plant growth-promoting abilities of these strains and shows their potential biotechnological applications in agriculture and other relevant sectors.
© 2021. The Author(s).

Entities:  

Keywords:  Bacillus; Biosynthetic gene clusters; Comparative genomics; Functional genomics; Pan-genome analysis; Plant growth-promoting bacteria

Mesh:

Year:  2021        PMID: 34529229      PMCID: PMC8610958          DOI: 10.1007/s12010-021-03660-3

Source DB:  PubMed          Journal:  Appl Biochem Biotechnol        ISSN: 0273-2289            Impact factor:   2.926


  45 in total

1.  Studies on lysogenesis. I. The mode of phage liberation by lysogenic Escherichia coli.

Authors:  G BERTANI
Journal:  J Bacteriol       Date:  1951-09       Impact factor: 3.490

Review 2.  Plant pan-genomes are the new reference.

Authors:  Philipp E Bayer; Agnieszka A Golicz; Armin Scheben; Jacqueline Batley; David Edwards
Journal:  Nat Plants       Date:  2020-07-20       Impact factor: 15.793

3.  Bacillus velezensis Wall Teichoic Acids Are Required for Biofilm Formation and Root Colonization.

Authors:  Zhihui Xu; Huihui Zhang; Xinli Sun; Yan Liu; Wuxia Yan; Weibing Xun; Qirong Shen; Ruifu Zhang
Journal:  Appl Environ Microbiol       Date:  2019-02-20       Impact factor: 4.792

4.  Genomic and Functional Characterization of the Endophytic Bacillus subtilis 7PJ-16 Strain, a Potential Biocontrol Agent of Mulberry Fruit Sclerotiniose.

Authors:  Wei-Fang Xu; Hui-Shuang Ren; Ting Ou; Ting Lei; Jun-Hong Wei; Chuan-Shu Huang; Tian Li; Gary Strobel; Ze-Yang Zhou; Jie Xie
Journal:  Microb Ecol       Date:  2018-09-03       Impact factor: 4.552

5.  Four superoxide dismutases of Bacillus cereus 0-9 are non-redundant and perform different functions in diverse living conditions.

Authors:  Juanmei Zhang; Haodong Wang; Qiubin Huang; Ying Zhang; Linlin Zhao; Fengying Liu; Gang Wang
Journal:  World J Microbiol Biotechnol       Date:  2020-01-02       Impact factor: 3.312

6.  Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies.

Authors:  Seok-Hwan Yoon; Sung-Min Ha; Soonjae Kwon; Jeongmin Lim; Yeseul Kim; Hyungseok Seo; Jongsik Chun
Journal:  Int J Syst Evol Microbiol       Date:  2017-05-30       Impact factor: 2.747

Review 7.  Below-ground-above-ground Plant-microbial Interactions: Focusing on Soybean, Rhizobacteria and Mycorrhizal Fungi.

Authors:  Nicholas O Igiehon; Olubukola O Babalola
Journal:  Open Microbiol J       Date:  2018-07-31

8.  Genome analysis of a Bacillus subtilis strain reveals genetic mutations determining biocontrol properties.

Authors:  Bettina Bóka; László Manczinger; Sándor Kocsubé; Kadaikunnan Shine; Naiyf S Alharbi; Jamal M Khaled; Martin Münsterkötter; Csaba Vágvölgyi; László Kredics
Journal:  World J Microbiol Biotechnol       Date:  2019-03-13       Impact factor: 3.312

9.  Phage Biocontrol of Campylobacter jejuni in Chickens Does Not Produce Collateral Effects on the Gut Microbiota.

Authors:  Philip J Richards; Phillippa L Connerton; Ian F Connerton
Journal:  Front Microbiol       Date:  2019-03-12       Impact factor: 5.640

10.  GC-MS analysis of volatile organic compounds from Bambara groundnut rhizobacteria and their antibacterial properties.

Authors:  Caroline F Ajilogba; Olubukola O Babalola
Journal:  World J Microbiol Biotechnol       Date:  2019-05-27       Impact factor: 3.312

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  6 in total

1.  Evidence from Co-expression Analysis for the Involvement of Amidase and INS in the Tryptophan-Independent Pathway of IAA Synthesis in Arabidopsis.

Authors:  Yousef M Abu-Zaitoon; Ahmed Abu-Zaiton; Abdel Rahman Al Tawaha; Khalid Ghazi Fandi; Sulaiman M Alnaimat; Siddhartha Pati; Fouad A Almomani
Journal:  Appl Biochem Biotechnol       Date:  2022-07-08       Impact factor: 3.094

2.  Effects of Bacillus subtilis T6-1 on the Rhizosphere Microbial Community Structure of Continuous Cropping Poplar.

Authors:  Junkang Sui; Qianqian Yu; Kai Yang; Jiayi Yang; Chenyu Li; Xunli Liu
Journal:  Biology (Basel)       Date:  2022-05-23

3.  Plant Growth Stage Drives the Temporal and Spatial Dynamics of the Bacterial Microbiome in the Rhizosphere of Vigna subterranea.

Authors:  Caroline Fadeke Ajilogba; Oluwaseyi Samuel Olanrewaju; Olubukola Oluranti Babalola
Journal:  Front Microbiol       Date:  2022-02-17       Impact factor: 5.640

4.  Multi-Omics Techniques for Analysis Antifungal Mechanisms of Lipopeptides Produced by Bacillus velezensis GS-1 against Magnaporthe oryzae In Vitro.

Authors:  Yanhua Zhang; Meixi Zhao; Wei Chen; Huilin Yu; Wantong Jia; Hongyu Pan; Xianghui Zhang
Journal:  Int J Mol Sci       Date:  2022-03-29       Impact factor: 5.923

Review 5.  Improving Bambara Groundnut Production: Insight Into the Role of Omics and Beneficial Bacteria.

Authors:  Caroline Fadeke Ajilogba; Oluwaseyi Samuel Olanrewaju; Olubukola Oluranti Babalola
Journal:  Front Plant Sci       Date:  2022-03-02       Impact factor: 5.753

Review 6.  Current Techniques to Study Beneficial Plant-Microbe Interactions.

Authors:  Elisa Gamalero; Elisa Bona; Bernard R Glick
Journal:  Microorganisms       Date:  2022-07-08
  6 in total

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