Literature DB >> 34523614

RNA-binding proteins of COSMIC importance in cancer.

Peter S Choi, Andrei Thomas-Tikhonenko.   

Abstract

Herculean efforts by the Wellcome Sanger Institute, the National Cancer Institute, and the National Human Genome Research Institute to sequence thousands of tumors representing all major cancer types have yielded more than 700 genes that contribute to neoplastic growth when mutated, amplified, or deleted. While some of these genes (now included in the COSMIC Cancer Gene Census) encode proteins previously identified in hypothesis-driven experiments (oncogenic transcription factors, protein kinases, etc.), additional classes of cancer drivers have emerged, perhaps none more surprisingly than RNA-binding proteins (RBPs). Over 40 RBPs responsible for virtually all aspects of RNA metabolism, from synthesis to degradation, are recurrently mutated in cancer, and just over a dozen are considered major cancer drivers. This Review investigates whether and how their RNA-binding activities pertain to their oncogenic functions. Focusing on several well-characterized steps in RNA metabolism, we demonstrate that for virtually all cancer-driving RBPs, RNA processing activities are either abolished (the loss-of-function phenotype) or carried out with low fidelity (the LoFi phenotype). Conceptually, this suggests that in normal cells, RBPs act as gatekeepers maintaining proper RNA metabolism and the "balanced" proteome. From the practical standpoint, at least some LoFi phenotypes create therapeutic vulnerabilities, which are beginning to be exploited in the clinic.

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Year:  2021        PMID: 34523614      PMCID: PMC8439603          DOI: 10.1172/JCI151627

Source DB:  PubMed          Journal:  J Clin Invest        ISSN: 0021-9738            Impact factor:   19.456


  193 in total

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Authors:  G B Silberstein; K Van Horn; P Strickland; C T Roberts; C W Daniel
Journal:  Proc Natl Acad Sci U S A       Date:  1997-07-22       Impact factor: 11.205

2.  Therapeutic Targeting of RNA Splicing Catalysis through Inhibition of Protein Arginine Methylation.

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Journal:  Cancer Cell       Date:  2019-08-12       Impact factor: 31.743

Review 3.  RNA-binding proteins in human genetic disease.

Authors:  Fátima Gebauer; Thomas Schwarzl; Juan Valcárcel; Matthias W Hentze
Journal:  Nat Rev Genet       Date:  2020-11-24       Impact factor: 53.242

Review 4.  Biological and clinical consequences of NPM1 mutations in AML.

Authors:  E M Heath; S M Chan; M D Minden; T Murphy; L I Shlush; A D Schimmer
Journal:  Leukemia       Date:  2017-01-23       Impact factor: 11.528

5.  Exome sequencing identifies somatic mutations of DDX3X in natural killer/T-cell lymphoma.

Authors:  Lu Jiang; Zhao-Hui Gu; Zi-Xun Yan; Xia Zhao; Yin-Yin Xie; Zi-Guan Zhang; Chun-Ming Pan; Yuan Hu; Chang-Ping Cai; Ying Dong; Jin-Yan Huang; Li Wang; Yang Shen; Guoyu Meng; Jian-Feng Zhou; Jian-Da Hu; Jin-Fen Wang; Yuan-Hua Liu; Lin-Hua Yang; Feng Zhang; Jian-Min Wang; Zhao Wang; Zhi-Gang Peng; Fang-Yuan Chen; Zi-Min Sun; Hao Ding; Ju-Mei Shi; Jian Hou; Jin-Song Yan; Jing-Yi Shi; Lan Xu; Yang Li; Jing Lu; Zhong Zheng; Wen Xue; Wei-Li Zhao; Zhu Chen; Sai-Juan Chen
Journal:  Nat Genet       Date:  2015-07-20       Impact factor: 38.330

6.  A Compendium of RNA-Binding Proteins that Regulate MicroRNA Biogenesis.

Authors:  Thomas Treiber; Nora Treiber; Uwe Plessmann; Simone Harlander; Julia-Lisa Daiß; Norbert Eichner; Gerhard Lehmann; Kevin Schall; Henning Urlaub; Gunter Meister
Journal:  Mol Cell       Date:  2017-04-20       Impact factor: 17.970

7.  A multifunctional protein EWS regulates the expression of Drosha and microRNAs.

Authors:  K Y Kim; Y J Hwang; M-K Jung; J Choe; Y Kim; S Kim; C-J Lee; H Ahn; J Lee; N W Kowall; Y K Kim; J-I Kim; S B Lee; H Ryu
Journal:  Cell Death Differ       Date:  2013-11-01       Impact factor: 15.828

8.  The landscape of cancer genes and mutational processes in breast cancer.

Authors:  Philip J Stephens; Patrick S Tarpey; Helen Davies; Peter Van Loo; Chris Greenman; David C Wedge; Serena Nik-Zainal; Sancha Martin; Ignacio Varela; Graham R Bignell; Lucy R Yates; Elli Papaemmanuil; David Beare; Adam Butler; Angela Cheverton; John Gamble; Jonathan Hinton; Mingming Jia; Alagu Jayakumar; David Jones; Calli Latimer; King Wai Lau; Stuart McLaren; David J McBride; Andrew Menzies; Laura Mudie; Keiran Raine; Roland Rad; Michael Spencer Chapman; Jon Teague; Douglas Easton; Anita Langerød; Ming Ta Michael Lee; Chen-Yang Shen; Benita Tan Kiat Tee; Bernice Wong Huimin; Annegien Broeks; Ana Cristina Vargas; Gulisa Turashvili; John Martens; Aquila Fatima; Penelope Miron; Suet-Feung Chin; Gilles Thomas; Sandrine Boyault; Odette Mariani; Sunil R Lakhani; Marc van de Vijver; Laura van 't Veer; John Foekens; Christine Desmedt; Christos Sotiriou; Andrew Tutt; Carlos Caldas; Jorge S Reis-Filho; Samuel A J R Aparicio; Anne Vincent Salomon; Anne-Lise Børresen-Dale; Andrea L Richardson; Peter J Campbell; P Andrew Futreal; Michael R Stratton
Journal:  Nature       Date:  2012-05-16       Impact factor: 49.962

Review 9.  The BRG1 ATPase of human SWI/SNF chromatin remodeling enzymes as a driver of cancer.

Authors:  Qiong Wu; Jane B Lian; Janet L Stein; Gary S Stein; Jeffrey A Nickerson; Anthony N Imbalzano
Journal:  Epigenomics       Date:  2017-05-19       Impact factor: 4.778

Review 10.  XPO1 in B cell hematological malignancies: from recurrent somatic mutations to targeted therapy.

Authors:  Vincent Camus; Hadjer Miloudi; Antoine Taly; Brigitte Sola; Fabrice Jardin
Journal:  J Hematol Oncol       Date:  2017-02-14       Impact factor: 17.388

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2.  ADAR3 activates NF-κB signaling and promotes glioblastoma cell resistance to temozolomide.

Authors:  Reshma Raghava Kurup; Eimile K Oakes; Pranathi Vadlamani; Obi Nwosu; Pranav Danthi; Heather A Hundley
Journal:  Sci Rep       Date:  2022-08-03       Impact factor: 4.996

3.  RNA-binding protein ZCCHC4 promotes human cancer chemoresistance by disrupting DNA-damage-induced apoptosis.

Authors:  Ha Zhu; Kun Chen; Yali Chen; Juan Liu; Xiaomin Zhang; Yumei Zhou; Qiuyan Liu; Bingjing Wang; Taoyong Chen; Xuetao Cao
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  3 in total

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