| Literature DB >> 34521295 |
Jiaxi Wang1,2,3,4,5, Yuanyuan Peng1,5, Hejia Guo6,5, Cuiping Li2,3,4,7.
Abstract
BACKGROUND: The plasminogen activator inhibitor-1 (PAI-1) was found in many types of tumor cells, which involved in tumorigenesis. Some studies investigated the associations between PAI-1 polymorphisms and various cancers, but the results were inconsistent. So this study did a meta-analysis to assess the strength of relationship between PAI-1 and cancer.Entities:
Keywords: PAI-1; cancer; meta-analysis; polymorphism
Mesh:
Substances:
Year: 2021 PMID: 34521295 PMCID: PMC8447096 DOI: 10.1177/15330338211037813
Source DB: PubMed Journal: Technol Cancer Res Treat ISSN: 1533-0338
Figure 1.The whole flow diagram of filtering the available articles in this study.
The Main Characteristics of the Eligible Studies for Rs1799889, Rs2227631 and Rs2227667 Polymorphism.a
| No. | Author | Year | Ethnicity | Country | Cancer type | Source of control | Sample size of case | Sample size of control | Ca4G/4G | Ca4G/5G | Ca5G/5G | Con4G/4G | Con4G/C5G | Con5G/5G | Genotyping method | HWE | NOS score |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs1799889 | |||||||||||||||||
| 1 | Türkmen | 1997 | Caucasian | German | Ovarian | NA | 22 | 23 | 1 | 10 | 11 | 2 | 10 | 11 | PCR-RFLP | Yes | 6 |
| 2 | Smolarz | 1999 | Caucasian | Poland | Breast | NA | 37 | 53 | 15 | 14 | 8 | 11 | 23 | 19 | Allele-specific PCR | Yes | 7 |
| 3 | Blasiak | 2000 | Caucasian | Poland | Breast | NA | 100 | 106 | 31 | 40 | 29 | 21 | 48 | 37 | PCR-SSCP | Yes | 7 |
| 4 | Loktionov | 2003 | Caucasian | UK | Colorectal | HB | 206 | 355 | 60 | 94 | 52 | 85 | 187 | 83 | PCR-SSCP | Yes | 8 |
| 5 | Bi | 2004 | Asian | China | Breast | PB | 53 | 146 | 18 | 29 | 6 | 43 | 87 | 16 | PCR-SSCP | Yes | 8 |
| 6 | Zhou | 2005 | Asian | China | Ovarian | HB | 52 | 30 | 18 | 25 | 9 | 10 | 15 | 5 | PCR-SSCP | Yes | 8 |
| 7 | Zhang | 2005 | Asian | China | Leukemia | NA | 30 | 30 | 16 | 10 | 4 | 13 | 12 | 5 | Allele-specific PCR | Yes | 8 |
| 8 | Sternlicht | 2006 | Caucasian | USA | Breast | PB | 2539 | 1832 | 790 | 1229 | 520 | 550 | 896 | 386 | Minisequencing | Yes | 8 |
| 9 | Försti | 2007 | Caucasian | German | Colorectal | PB | 304 | 581 | 107 | 137 | 60 | 210 | 266 | 105 | Taqman | Yes | 9 |
| 10 | Woo | 2007 | Asian | Korea | Colorectal | NA | 185 | 304 | 67 | 84 | 34 | 108 | 137 | 59 | PCR-RFLP | Yes | 8 |
| 11 | Minisini | 2007 | Caucasian | Italy | Breast | NA | 193 | 142 | 56 | 85 | 52 | 39 | 68 | 35 | Allele-specific PCR | Yes | 6 |
| 12 | Lei | 2008 | Caucasian | German | Breast | PB | 956 | 933 | 322 | 482 | 152 | 326 | 453 | 164 | Taqman | Yes | 9 |
| 13 | Bentov | 2009 | Mixed | Canada | Ovarian | HB | 772 | 889 | 226 | 372 | 174 | 257 | 440 | 192 | MALDI-TOF | Yes | 8 |
| 14 | Palmirotta | 2009 | Caucasian | Italy | Breast | NA | 99 | 50 | 26 | 43 | 30 | 10 | 29 | 11 | Sequencing | Yes | 8 |
| 15 | Weng | 2010 | Asian | China | Hepatocellular | NA | 102 | 344 | 27 | 58 | 17 | 87 | 181 | 76 | PCR-RFLP | Yes | 8 |
| 16 | Su | 2011 | Asian | China | Endometrial | HB | 134 | 302 | 49 | 67 | 18 | 77 | 161 | 64 | PCR-RFLP | Yes | 8 |
| 17 | Vossen | 2011 | Caucasian | Netherlands | Colorectal | PB | 1731 | 1799 | 523 | 816 | 353 | 523 | 929 | 347 | Taqman | Yes | 8 |
| 18 | Weng | 2011 | Asian | China | Oral | HB | 253 | 344 | 64 | 136 | 53 | 87 | 181 | 76 | PCR-RFLP | Yes | 8 |
| 19 | Onur | 2012 | Caucasian | Turkey | Mixed | NA | 28 | 50 | 6 | 10 | 12 | 28 | 38 | 34 | 2 parallel PCR | Yes | 8 |
| 20 | Tee | 2012 | Asian | China | Cervical | HB | 75 | 336 | 53 | 59 | 24 | 102 | 169 | 65 | PCR-RFLP | Yes | 7 |
| 21 | Gilabert-Estelles | 2012 | Spain | Caucasian | Endometrial | PB | 212 | 211 | 51 | 118 | 43 | 35 | 111 | 65 | Real-time PCR | Yes | 9 |
| 22 | Divella | 2012 | Caucasian | Italy | Hepatic | PB | 75 | 50 | 27 | 20 | 28 | 8 | 15 | 27 | Allele-specific PCR | Yes | 9 |
| 23 | Vylliotis | 2013 | Caucasian | Greek and German | Oral | NA | 104 | 106 | 45 | 47 | 12 | 31 | 43 | 32 | PCR-RFLP | Yes | 8 |
| 24 | Ramos-Flores | 2013 | Caucasian | Mexico | Cervical | NA | 100 | 100 | 0 | 45 | 55 | 3 | 30 | 67 | PCR-SSCP | Yes | 7 |
| 25 | Ozen | 2013 | Caucasian | Turkey | Breast | NA | 51 | 106 | 8 | 30 | 13 | 10 | 62 | 34 | StripAssay | Yes | 8 |
| 26 | Bayramoglu | 2014 | Caucasian | Turkey | Lung | HB | 156 | 132 | 49 | 48 | 59 | 28 | 22 | 82 | Allele-specific PCR | Yes | 7 |
| 27 | Mitrovic | 2014 | Caucasian | Serbia | Leukemia | PB | 34 | 126 | 10 | 15 | 9 | 44 | 58 | 24 | PCR-RFLP | Yes | 8 |
| 28 | Pooyan | 2015 | Caucasian | Iran | Glioblastoma | HB | 71 | 140 | 21 | 30 | 20 | 13 | 84 | 43 | ARMS-PCR | Yes | 7 |
| 29 | Edel | 2016 | Caucasian | Egypt | Hepatic | NA | 49 | 105 | 8 | 24 | 17 | 2 | 49 | 36 | Allele-specific PCR | Yes | 7 |
| 30 | Yildirim | 2017 | Caucasian | Turkey | Endometrial | NA | 82 | 76 | 22 | 51 | 9 | 11 | 43 | 22 | PCR-RFLP | Yes | 8 |
| 31 | Zhang | 2018 | Asian | China | Nasopharyngeal | HB | 86 | 35 | 28 | 44 | 14 | 12 | 17 | 6 | PCR-RFLP | Yes | 8 |
| 32 | Oh | 2020 | Asian | Korea | Colorectal | PB | 459 | 416 | 171 | 206 | 82 | 180 | 180 | 56 | PCR-RFLP | Yes | 9 |
| 33 | Pouladi | 2021 | Caucasian | Iranian-Azeri | Breast | NA | 200 | 179 | 22 | 141 | 37 | 20 | 127 | 32 | ARMS-PCR | Yes | 7 |
| rs2227631 | |||||||||||||||||
| 1 | Bentov | 2009 | Mixed | Canada | Ovarian | HB | 766 | 888 | 260 | 362 | 144 | 315 | 425 | 148 | MALDI-TOF | Yes | 8 |
| 2 | Ju | 2010 | Asian | Korea | Gastric | NA | 249 | 406 | 20 | 122 | 109 | 58 | 177 | 166 | MALDI-TOF | Yes | 8 |
| 3 | Pooyan | 2015 | Caucasian | Iran | Glioblastoma | HB | 71 | 140 | 14 | 33 | 24 | 5 | 81 | 54 | ARMS-PCR | Yes | 7 |
| 4 | Chen | 2016 | Asian | China | Breast | NA | 1160 | 1318 | 194 | 519 | 447 | 224 | 607 | 487 | TaqMan | Yes | 8 |
| 5 | Oh | 2020 | Asian | Korea | Colorectal | PB | 459 | 416 | 75 | 230 | 154 | 81 | 199 | 136 | PCR-RFLP | Yes | 9 |
| rs2227667 | |||||||||||||||||
| 1 | Ju | 2010 | Asian | Korea | Gastric | NA | 249 | 406 | 57 | 141 | 51 | 142 | 190 | 74 | MALDI-TOF | Yes | 8 |
| 2 | Purdue | 2011 | Caucasian | USA | myeloma | PB | 103 | 475 | 76 | 26 | 26 | 255 | 198 | 20 | GoldenGate platform | Yes | 9 |
| 3 | Martino | 2014 | Caucasian | Mixed | myeloma | PB | 1287 | 1812 | 762 | 457 | 68 | 1080 | 623 | 109 | TaqMan and KASPar | Yes | 9 |
| 4 | Chen | 2016 | Asian | China | Breast | NA | 1160 | 1318 | 216 | 551 | 393 | 269 | 618 | 431 | TaqMan | Yes | 8 |
Abbreviations: NA, not available; PB, population-based; HB, hospital-based; HWE, Hardy-Weinberg equilibrium; NOS, Newcastle-Ottawa scale.
a Mixed ethnicity: those studies with more than one ethnic group or those difficult to separate participants.
Stratified Analyses of the Rs1799889 Polymorphism on Cancer Risk.a
| Comparative model | No. | Z |
| OR (95% CI) | Heterogeneity | FPRP | FPRP statistical powerc | FPRP prior probability | BFDP prior probability | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Heterogeneity chi-squared |
| I2 | Z | Begg’s test | t | Egger’s test | 0.25 | 0.10 | 0.01 | 0.001 | 0.0001 | 0.01 | 0.001 | 0.000001 | |||||||
| 4G4G/5G5G | |||||||||||||||||||||
| Overall | 33 | 3.22 | 0.001 | 1.297(1.107-1.519) | 75.13 | 0 | 57.4% | 1.29 | 0.198 | 2.6 | 0.016 | 0.001 | 0.964 |
|
|
| 0.565 | 0.929 | 0.809 | 0.977 | 1.000 |
| Ethnicity | |||||||||||||||||||||
| Caucasian | 22 | 3.31 | 0.001 | 1.435(1.159-1.778) | 60.38 | 0 | 65.20% | 0.73 | 0.463 | 2.4 | 0.027 | 0.001 | 0.657 |
|
|
| 0.593 | 0.936 |
| 0.965 | 1.000 |
| Asian | 10 | 0.78 | 0.435 | 1.082(0.887-1.320) | 13.09 | 0.159 | 31.20% | 0.36 | 0.721 | 1.1 | 0.289 | 0.437 | 0.999 | 0.568 | 0.797 | 0.977 | 0.998 | 1.000 | 0.998 | 1.000 | 1.000 |
| Source of control | |||||||||||||||||||||
| HB | 9 | 2.35 | 0.019 | 1.429(1.061-1.925) | 18.24 | 0.019 | 56.10% | 1.36 | 0.175 | 1.6 | 0.146 | 0.019 | 0.625 |
| 0.214 | 0.749 | 0.968 | 0.997 | 0.967 | 0.997 | 1.000 |
| PB | 9 | 0.46 | 0.644 | 1.048(0.859-1.278) | 19.45 | 0.013 | 58.90% | 0.31 | 0.754 | 0.6 | 0.603 | 0.643 | 1.000 | 0.659 | 0.853 | 0.985 | 0.998 | 1.000 | 0.998 | 1.000 | 1.000 |
| Cancer types | |||||||||||||||||||||
| Ovarian | 3 | 0.27 | 0.789 | 0.965(0.74-1.257) | 0.26 | 0.878 | 0.00% | 0.792 | 0.997 | 0.704 | 0.877 | 0.987 | 0.999 | 1.000 | 0.998 | 1.000 | 1.000 | ||||
| Breast | 9 | 1.46 | 0.145 | 1.102(0.967-1.257) | 7.35 | 0.499 | 0.00% | 0.148 | 1.000 | 0.308 | 0.571 | 0.936 | 0.993 | 0.999 | 0.997 | 1.000 | 1.000 | ||||
| Colorectal | 5 | 0.89 | 0.371 | 0.936(0.811-1.081) | 4.4 | 0.354 | 9.20% | 0.368 | 1.000 | 0.525 | 0.768 | 0.973 | 0.997 | 1.000 | 0.998 | 1.000 | 1.000 | ||||
| Oral | 2 | 1.02 | 0.308 | 1.937(0.543-6.907) | 7.41 | 0.006 | 86.50% | 0.308 | 0.347 | 0.727 | 0.889 | 0.989 | 0.999 | 1.000 | 0.991 | 0.999 | 1.000 | ||||
| Hepatocellular | 3 | 2.11 | 0.035 | 2.72(1.076-6.88) | 4.97 | 0.084 | 59.70% | 0.035 | 0.104 | 0.498 | 0.749 | 0.970 | 0.997 | 1.000 | 0.977 | 0.998 | 1.000 | ||||
| Endometrial | 3 | 4.51 | 0 | 2.487(1.674-3.696) | 1.81 | 0.404 | 0.00% | 0.000 | 0.006 |
|
|
| 0.515 | 0.914 |
|
| 0.974 | ||||
| Cervical | 2 | 0.93 | 0.353 | 1.306(0.743-2.295) | 1.82 | 0.177 | 45.10% | 0.353 | 0.685 | 0.607 | 0.823 | 0.981 | 0.998 | 1.000 | 0.994 | 0.999 | 1.000 | ||||
| Leukemia | 2 | 0.46 | 0.648 | 0.822(0.353-1.91) | 1 | 0.316 | 0.4 | 0.649 | 0.687 | 0.739 | 0.895 | 0.989 | 0.999 | 1.000 | 0.993 | 0.999 | 1.000 | ||||
| 4G4G/4G5G | |||||||||||||||||||||
| Overall | 33 | 2.68 | 0.007 | 1.095(1.025-1.170) | 46.15 | 0.05 | 30.70% | 1.41 | 0.159 | 2.2 | 0.038 | 0.007 | 1.000 |
|
| 0.418 | 0.879 | 0.986 | 0.978 | 0.998 | 1.000 |
| Ethnicity | |||||||||||||||||||||
| Caucasian | 22 | 2.68 | 0.007 | 1.113(1.029-1.203) | 37.13 | 0.016 | 43.40% | 1.02 | 0.31 | 2 | 0.06 | 0.007 | 1.000 |
|
| 0.408 | 0.874 | 0.986 | 0.974 | 0.997 | 1.000 |
| Asian | 10 | 0.69 | 0.488 | 1.055(0.906-1.229) | 8.46 | 0.488 | 0.00% | 1.25 | 0.21 | 1.2 | 0.27 | 0.492 | 1.000 | 0.596 | 0.816 | 0.980 | 0.998 | 1.000 | 0.998 | 1.000 | 1.000 |
| Source of control | |||||||||||||||||||||
| HB | 9 | 1.92 | 0.055 | 1.270(0.995-1.620) | 17.25 | 0.028 | 53.60% | 1.15 | 0.251 | 1 | 0.356 | 0.054 | 0.910 |
| 0.349 | 0.855 | 0.983 | 0.998 | 0.987 | 0.999 | 1.000 |
| PB | 9 | 0.99 | 0.321 | 1.042(0.960-1.131) | 9.43 | 0.307 | 15.20% | 0.52 | 0.602 | 0.6 | 0.562 | 0.325 | 1.000 | 0.494 | 0.745 | 0.970 | 0.997 | 1.000 | 0.999 | 1.000 | 1.000 |
| Cancer types | |||||||||||||||||||||
| Ovarian | 3 | 0.32 | 0.75 | 1.036(0.832-1.291) | 0.32 | 0.852 | 0.00% | 0.753 | 1.000 | 0.693 | 0.871 | 0.987 | 0.999 | 1.000 | 0.998 | 1.000 | 1.000 | ||||
| Breast | 9 | 0.98 | 0.329 | 1.054(0.949-1.171) | 8.23 | 0.412 | 2.80% | 0.327 | 1.000 | 0.496 | 0.747 | 0.970 | 0.997 | 1.000 | 0.998 | 1.000 | 1.000 | ||||
| Colorectal | 5 | 1.17 | 0.243 | 1.070(0.955-1.200) | 5.56 | 0.234 | 28.10% | 0.247 | 1.000 | 0.426 | 0.690 | 0.961 | 0.996 | 1.000 | 0.998 | 1.000 | 1.000 | ||||
| Oral | 2 | 0.39 | 0.693 | 1.069 (0.768-1.488) | 0.67 | 0.413 | 0.00% | 0.693 | 0.978 | 0.680 | 0.864 | 0.986 | 0.999 | 1.000 | 0.997 | 1.000 | 1.000 | ||||
| Hepatocellular | 3 | 1.38 | 0.166 | 2.224 (0.717-6.896) | 7.68 | 0.022 | 74% | 0.166 | 0.248 | 0.668 | 0.858 | 0.985 | 0.999 | 1.000 | 0.989 | 0.999 | 1.000 | ||||
| Endometrial | 3 | 2.48 | 0.013 | 1.486(1.086-2.033) | 0.2 | 0.903 | 0.00% | 0.013 | 0.523 |
|
| 0.715 | 0.962 | 0.996 | 0.955 | 0.995 | 1.000 | ||||
| Cervical | 2 | 1.51 | 0.132 | 1.403(0.903-2.179) | 3.15 | 0.076 | 68.20% | 0.132 | 0.617 | 0.390 | 0.658 | 0.955 | 0.995 | 1.000 | 0.990 | 0.999 | 1.000 | ||||
| Leukemia | 2 | 0.21 | 0.836 | 1.076(0.539-2.146) | 0.51 | 0.476 | 0 | 0.835 | 0.827 | 0.752 | 0.901 | 0.990 | 0.999 | 1.000 | 0.995 | 0.999 | 1.000 | ||||
| 4G4G/4G5G+5G5G | |||||||||||||||||||||
| Overall | 33 | 3.12 | 0.002 | 1.104(1.038-1.176) | 60.98 | 0.002 | 47.50% | 1.66 | 0.097 | 2.8 | 0.009 | 0.002 | 1.000 |
|
|
| 0.682 | 0.955 | 0.940 | 0.994 | 1.000 |
| Ethnicity | |||||||||||||||||||||
| Caucasian | 22 | 3.4 | 0.001 | 1.302(1.118-1.516) | 47.34 | 0.001 | 55.60% | 1.18 | 0.236 | 2.7 | 0.016 | 0.001 | 0.966 |
|
|
| 0.412 | 0.875 |
| 0.962 | 1.000 |
| Asian | 10 | 0.75 | 0.45 | 1.057(0.916-1.220) | 12.49 | 0.187 | 27.90% | 1.25 | 0.21 | 1.3 | 0.231 | 0.448 | 1.000 | 0.573 | 0.801 | 0.978 | 0.998 | 1.000 | 0.998 | 1.000 | 1.000 |
| Source of control | |||||||||||||||||||||
| HB | 9 | 2.52 | 0.012 | 1.352(1.07-1.708) | 18.46 | 0.018 | 56.70% | 1.36 | 0.175 | 1.7 | 0.127 | 0.011 | 0.808 |
|
| 0.584 | 0.934 | 0.993 | 0.957 | 0.996 | 1.000 |
| PB | 9 | 0.54 | 0.588 | 1.036(0.912-1.176) | 14.81 | 0.063 | 46.00% | 0.73 | 0.466 | 0.7 | 0.507 | 0.584 | 1.000 | 0.637 | 0.840 | 0.983 | 0.998 | 1.000 | 0.999 | 1.000 | 1.000 |
| Cancer types | |||||||||||||||||||||
| Ovarian | 3 | 0.14 | 0.889 | 1.015(0.825-1.247) | 0.32 | 0.851 | 0.00% | 0.887 | 1.000 | 0.727 | 0.889 | 0.989 | 0.999 | 1.000 | 0.998 | 1.000 | 1.000 | ||||
| Breast | 9 | 1.24 | 0.215 | 1.065(0.964-1.176) | 9.13 | 0.332 | 12.30% | 0.213 | 1.000 | 0.390 | 0.657 | 0.955 | 0.995 | 1.000 | 0.998 | 1.000 | 1.000 | ||||
| Colorectal | 5 | 0.47 | 0.639 | 1.026(0.922-1.142) | 6.38 | 0.172 | 37.30% | 0.639 | 1.000 | 0.657 | 0.852 | 0.984 | 0.998 | 1.000 | 0.999 | 1.000 | 1.000 | ||||
| Oral | 2 | 0.88 | 0.379 | 1.306(0.72-2.368) | 3.1 | 0.078 | 67.70% | 0.379 | 0.676 | 0.627 | 0.835 | 0.982 | 0.998 | 1.000 | 0.994 | 0.999 | 1.000 | ||||
| Hepatocellular | 3 | 1.61 | 0.106 | 2.444(0.826-7.232) | 8.42 | 0.015 | 76.30% | 0.106 | 0.189 | 0.628 | 0.835 | 0.982 | 0.998 | 1.000 | 0.986 | 0.999 | 1.000 | ||||
| Endometrial | 3 | 3.5 | 0 | 1.707(1.265-2.304) | 0.42 | 0.81 | 0.00% | 0.000 | 0.199 |
|
|
| 0.704 | 0.960 |
| 0.928 | 0.999 | ||||
| Cervical | 2 | 0.3 | 0.768 | 0.728(0.088-6.01) | 2.37 | 0.124 | 57.70% | 0.768 | 0.533 | 0.812 | 0.928 | 0.993 | 0.999 | 1.000 | 0.991 | 0.999 | 1.000 | ||||
| Leukemia | 2 | 0.01 | 0.994 | 1.003(0.533-1.884) | 0.96 | 0.327 | 0 | 0.993 | 0.895 | 0.769 | 0.909 | 0.991 | 0.999 | 1.000 | 0.995 | 1.000 | 1.000 | ||||
| 4G4G+4G5G/5G5G | |||||||||||||||||||||
| Overall | 33 | 1.97 | 0.049 | 1.072(1.000-1.150) | 62.76 | 0.001 | 49.00% | 1.07 | 2.85 | 2.2 | 0.035 | 0.052 | 1.000 |
| 0.320 | 0.838 | 0.981 | 0.998 | 0.996 | 1.000 | 1.000 |
| Ethnicity | |||||||||||||||||||||
| Caucasian | 22 | 2.42 | 0.016 | 1.217(1.038-1.427) | 53.13 | 0 | 60.50% | 0.73 | 0.463 | 2 | 0.057 | 0.016 | 0.995 |
|
| 0.608 | 0.940 | 0.994 | 0.975 | 0.997 | 1.000 |
| Asian | 10 | 0.61 | 0.541 | 1.057(0.886-1.261) | 8.39 | 0.459 | 0.00% | 0.36 | 0.721 | 0.9 | 0.395 | 0.538 | 1.000 | 0.617 | 0.829 | 0.982 | 0.998 | 1.000 | 0.998 | 1.000 | 1.000 |
| Source of control | |||||||||||||||||||||
| HB | 9 | 1.48 | 0.138 | 1.212(0.940-1.562) | 18.5 | 0.018 | 56.70% | 0.73 | 0.466 | 0.9 | 0.381 | 0.137 | 0.950 | 0.303 | 0.566 | 0.935 | 0.993 | 0.999 | 0.994 | 0.999 | 1.000 |
| PB | 9 | 0.23 | 0.82 | 1.018(0.871-1.191) | 16.2 | 0.04 | 50.60% | 0.1 | 0.917 | 0.4 | 0.679 | 0.824 | 1.000 | 0.712 | 0.881 | 0.988 | 0.999 | 1.000 | 0.999 | 1.000 | 1.000 |
| Cancer types | |||||||||||||||||||||
| Ovarian | 3 | 0.49 | 0.626 | 0.946(0.756-1.183) | 0 | 0.998 | 0.00% | 0.626 | 0.999 | 0.653 | 0.849 | 0.984 | 0.998 | 1.000 | 0.998 | 1.000 | 1.000 | ||||
| Breast | 9 | 0.94 | 0.347 | 1.055(0.943-1.181) | 5.1 | 0.747 | 0.00% | 0.352 | 1.000 | 0.514 | 0.760 | 0.972 | 0.997 | 1.000 | 0.998 | 1.000 | 1.000 | ||||
| Colorectal | 5 | 1.8 | 0.072 | 0.891(0.785-1.010) | 1.99 | 0.737 | 0.00% | 0.071 | 1.000 |
| 0.390 | 0.876 | 0.986 | 0.999 | 0.994 | 0.999 | 1.000 | ||||
| Oral | 2 | 1.05 | 0.295 | 1.804(0.597-5.445) | 7.11 | 0.008 | 85.90% | 0.295 | 0.372 | 0.704 | 0.877 | 0.987 | 0.999 | 1.000 | 0.991 | 0.999 | 1.000 | ||||
| Hepatocellular | 3 | 2.16 | 0.031 | 1.527(1.039-2.243) | 0.68 | 0.713 | 0.00% | 0.031 | 0.464 | 0.167 | 0.375 | 0.869 | 0.985 | 0.999 | 0.974 | 0.997 | 1.000 | ||||
| Endometrial | 3 | 3.92 | 0 | 1.912(1.383-2.643) | 1.85 | 0.396 | 0.00% | 0.000 | 0.071 |
|
|
| 0.551 | 0.925 |
|
| 0.997 | ||||
| Cervical | 2 | 1.48 | 0.139 | 1.336(0.910-1.962) | 1 | 0.316 | 0.40% | 0.140 | 0.723 | 0.367 | 0.635 | 0.950 | 0.995 | 0.999 | 0.991 | 0.999 | 1.000 | ||||
| Leukemia | 2 | 0.58 | 0.559 | 0.799(0.376-1.697) | 0.65 | 0.421 | 0 | 0.559 | 0.681 | 0.711 | 0.881 | 0.988 | 0.999 | 1.000 | 0.994 | 0.999 | 0.999 | ||||
Abbreviations: OR, odds ratio; CI, confidence interval; PB, population-based; HB, hospital-based; FPRP, false positive report probability; BFDP, Bayesian False Discovery Probability.
a The results in bold represented there was statistically significant noteworthiness at 0.2 level by FPRP or 0.8 level by BFDP calculations.
bChi-square test was used to calculate the genotype and haplotype frequency distributions.
cStatistical power was the power to detect an odds ratio of 1.5 for the homozygotes with the rare genetic variant and 1 for the heterozygotes and for the homozygote with the common variant.
Figure 2.Forest plot of the statistical correlation between rs1799889 polymorphism and cancer susceptibility in all models (A: 4G4G vs 4G5G; B: 4G4G vs 5G5G; C: 4G4G vs 4G5G + 5G5G; D: 4G4G + 4G5G vs 5G5G). Data were pooled odds ratios (OR) with 95% confidence intervals (CI) determined using random-effects models or fixed-effects models according to I 2 values.
Figure 3.Forest plot of the statistical correlation between rs1799889 polymorphism and the susceptibility of feminine cancer in all models (A: 4G4G vs 4G5G; B: 4G4G vs 5G5G; C: 4G4G vs 4G5G + 5G5G; D: 4G4G + 4G5G vs 5G5G). Data were pooled odds ratios (OR) with 95% confidence intervals (CI) determined using random-effects models or fixed-effects models according to I 2 values.
Stratified Analyses of the rs1799889 Polymorphism on Feminine Cancer Risk.a
| Comparative model | No. | Z |
| OR (95% CI) | Heterogeneity | FPRP | FPRP statistical powerc | FPRP prior probability | BFDP prior probability | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Heterogeneity chi-squared |
| I2 | Z | Begg’s test | t | Egger’s test | 0.25 | 0.1 | 0.01 | 0.001 | 0.0001 | 0.01 | 0.001 | 0.000001 | |||||||
| 4G4G/5G5G | |||||||||||||||||||||
| Overall | 17 | 2.60 | 0.009 | 1.157(1.036-1.291) | 28.12 | 0.031 | 43.10% | 0.37 | 0.711 | 1.62 | 0.126 | 0.009 | 1.000 |
|
| 0.474 | 0.901 | 0.989 | 0.972 | 0.997 | 1.000 |
| Ethnicity | |||||||||||||||||||||
| Caucasian | 12 | 2.27 | 0.023 | 1.159(1.020-1.315) | 21.72 | 0.027 | 49.30% | 0.022 | 1.000 |
|
| 0.685 | 0.956 | 0.995 | 0.985 | 0.998 | 1.000 | ||||
| Asian | 4 | 2.39 | 0.017 | 1.586(1.087-2.314) | 2.23 | 0.526 | 0% | 0.017 | 0.386 |
| 0.280 | 0.811 | 0.977 | 0.998 | 0.959 | 0.996 | 1.000 | ||||
| Source of control | |||||||||||||||||||||
| HB | 4 | 0.25 | 0.212 | 1.311(0.857-2.004) | 6.4 | 0.094 | 53.10% | 0.211 | 0.733 | 0.463 | 0.722 | 0.966 | 0.997 | 1.000 | 0.993 | 0.999 | 1.000 | ||||
| PB | 4 | 1.52 | 0.129 | 1.113(0.969-1.279) | 5.71 | 0.127 | 47.50% | 0.131 | 1.000 | 0.282 | 0.541 | 0.929 | 0.992 | 0.999 | 0.996 | 1.000 | 1.000 | ||||
| 4G4G/4G5G | |||||||||||||||||||||
| Overall | 17 | 1.92 | 0.054 | 1.091(0.998-1.192) | 17.53 | 0.352 | 8.70% | 0.12 | 0.902 | 1.83 | 0.087 | 0.054 | 1.000 | 0.139 | 0.326 | 0.842 | 0.982 | 0.998 | 0.995 | 0.999 | 1.000 |
| Ethnicity | |||||||||||||||||||||
| Caucasian | 12 | 1.16 | 0.247 | 1.063(0.959-1.178) | 13.02 | 0.292 | 15.50% | 0.244 | 1.000 | 0.422 | 0.687 | 0.960 | 0.996 | 1.000 | 0.998 | 1.000 | 1.000 | ||||
| Asian | 4 | 2.50 | 0.012 | 1.426(1.08-1.884) | 0.55 | 0.908 | 0.00% | 0.013 | 0.639 |
|
| 0.660 | 0.951 | 0.995 | 0.956 | 0.995 | 1.000 | ||||
| Source of control | |||||||||||||||||||||
| HB | 4 | 1.73 | 0.084 | 1.173(0.979-1.406) | 3.5 | 0.32 | 14% | 0.084 | 0.996 | 0.203 | 0.432 | 0.893 | 0.988 | 0.999 | 0.993 | 0.999 | 1.000 | ||||
| PB | 4 | 0.49 | 0.624 | 1.028(0.921-1.147) | 2.65 | 0.45 | 0.00% | 0.621 | 1.000 | 0.651 | 0.848 | 0.984 | 0.998 | 1.000 | 0.999 | 1.000 | 1.000 | ||||
| 4G4G/4G5G+5G5G | |||||||||||||||||||||
| Overall | 17 | 2.38 | 0.017 | 1.107(1.018-1.204) | 22.78 | 0.12 | 29.80% | 0.37 | 0.711 | 2 | 0.063 | 0.018 | 1.000 |
|
| 0.637 | 0.946 | 0.994 | 0.988 | 0.999 | 1.000 |
| Ethnicity | |||||||||||||||||||||
| Caucasian | 12 | 1.66 | 0.096 | 1.086(0.985-1.197) | 16.64 | 0.119 | 33.90% | 0.097 | 1.000 | 0.225 | 0.465 | 0.905 | 0.990 | 0.999 | 0.997 | 1.000 | 1.000 | ||||
| Asian | 4 | 2.82 | 0.005 | 1.462(1.123-1.903) | 1.1 | 0.778 | 0.00% | 0.005 | 0.576 |
|
| 0.449 | 0.892 | 0.988 | 0.907 | 0.990 | 1.000 | ||||
| Source of control | |||||||||||||||||||||
| HB | 4 | 1.78 | 0.075 | 1.168(0.984-1.385) | 5.5 | 0.139 | 45.40% | 0.074 | 0.998 |
| 0.400 | 0.880 | 0.987 | 0.999 | 0.993 | 0.999 | 1.000 | ||||
| PB | 4 | 0.90 | 0.368 | 1.049(0.946-1.163) | 3.94 | 0.268 | 23.90% | 0.074 | 0.998 |
| 0.400 | 0.880 | 0.987 | 0.999 | 0.999 | 1.000 | 1.000 | ||||
| 4G4G+4G5G/5G5G | |||||||||||||||||||||
| Overall | 17 | 2.14 | 0.033 | 1.106(1.008-1.214) | 22.42 | 0.13 | 28.60% | 0.7 | 0.484 | 1.65 | 0.12 | 0.034 | 1.000 |
| 0.235 | 0.771 | 0.971 | 0.997 | 0.992 | 0.999 | 1.000 |
| Ethnicity | |||||||||||||||||||||
| Caucasian | 12 | 2.19 | 0.028 | 1.126(1.013-1.252) | 18.09 | 0.08 | 39.20% | 0.028 | 1.000 |
| 0.203 | 0.737 | 0.966 | 0.996 | 0.990 | 0.999 | 1.000 | ||||
| Asian | 4 | 1.44 | 0.15 | 1.284(0.913-1.804) | 1.89 | 0.595 | 0% | 0.150 | 0.815 | 0.355 | 0.623 | 0.948 | 0.995 | 0.999 | 0.992 | 0.999 | 1.000 | ||||
| Source of control | |||||||||||||||||||||
| HB | 4 | 0.48 | 0.632 | 1.049(0.863-1.274) | 3.83 | 0.28 | 21.70% | 0.629 | 1.000 | 0.654 | 0.850 | 0.984 | 0.998 | 1.000 | 0.998 | 1.000 | 1.000 | ||||
| PB | 4 | 1.5 | 0.135 | 1.096(0.972-1.236) | 4.88 | 0.18 | 38.60% | 0.135 | 1.000 | 0.288 | 0.549 | 0.930 | 0.993 | 0.999 | 0.997 | 1.000 | 1.000 | ||||
Abbreviations: OR, odds ratio; CI, confidence interval; PB, population-based; HB, hospital-based; FPRP, false positive report probability; BFDP, Bayesian False Discovery Probability.
a The results in bold represented there was statistically significant noteworthiness at 0.2 level by FPRP or 0.8 level by BFDP calculations.
bChi-square test was used to calculate the genotype and haplotype frequency distributions.
cStatistical power was the power to detect an odds ratio of 1.5 for the homozygotes with the rare genetic variant and 1 for the heterozygotes and for the homozygote with the common variant.
Figure 4.Forest plot of the correlation between rs1799889 polymorphism and the susceptibility of masticatory and gastrointestinal cancer in all models (A: 4G4G vs 4G5G; B: 4G4G vs 5G5G; C: 4G4G vs 4G5G + 5G5G; D: 4G4G + 4G5G vs 5G5G). Data were pooled odds ratios (OR) with 95% confidence intervals (CI) determined using random-effects models or fixed-effects models according to I 2 values.
Stratified Analyses of the Rs1799889 Polymorphism on Masticatory and Gastrointestinal Cancer Risk.a
| Comparative model | No. | Z |
| OR (95% CI) | Heterogeneity | FPRP | FPRP statistical powerc | FPRP prior probability | BFDP prior probability | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Heterogeneity chi-squared |
| I2 | Z | Begg’s test | t | Egger’s test | 0.25 | 0.1 | 0.01 | 0.001 | 0.0001 | 0.01 | 0.001 | 0.000001 | |||||||
| 4G4G/5G5G | |||||||||||||||||||||
| Overall | 7 | 0.31 | 0.755 | 1.042(0.805-1.348) | 16.03 | 0.014 | 62.60% | 1.8 | 0.072 | 1.06 | 0.336 | 0.754 | 0.997 | 0.694 | 0.872 | 0.987 | 0.999 | 1.000 | 0.998 | 1.000 | 1.000 |
| Ethnicity | |||||||||||||||||||||
| Caucasian | 4 | 0.94 | 0.348 | 1.21(0.813-1.801) | 11.25 | 0.01 | 73.30% | 0.348 | 0.855 | 0.549 | 0.785 | 0.976 | 0.998 | 1.000 | 0.995 | 0.999 | 1.000 | ||||
| Asian | 3 | 1.16 | 0.248 | 0.857(0.659-1.113) | 3.34 | 0.189 | 40% | 0.247 | 0.970 | 0.433 | 0.696 | 0.962 | 0.996 | 1.000 | 0.996 | 1.000 | 1.000 | ||||
| Source of control | |||||||||||||||||||||
| HB | 2 | 0.5 | 0.617 | 1.09(0.778-1.528) | 0.04 | 0.848 | 0% | 0.617 | 0.968 | 0.657 | 0.852 | 0.984 | 0.998 | 1.000 | 0.997 | 1.000 | 1.000 | ||||
| PB | 3 | 1.23 | 0.22 | 0.906(0.774-1.061) | 3.39 | 0.183 | 41.40% | 0.221 | 1.000 | 0.398 | 0.665 | 0.956 | 0.995 | 1.000 | 0.997 | 1.000 | 1.000 | ||||
| 4G4G/4G5G | |||||||||||||||||||||
| Overall | 7 | 1.23 | 0.217 | 1.070(0.961-1.192) | 6.23 | 0.398 | 3.70% | 1.2 | 0.23 | −0.14 | 0.891 | 0.219 | 1.000 | 0.397 | 0.664 | 0.956 | 0.995 | 1.000 | 0.998 | 1.000 | 1.000 |
| Ethnicity | |||||||||||||||||||||
| Caucasian | 4 | 2.03 | 0.042 | 1.142(1.005-1.297) | 2.01 | 0.57 | 0.00% | 0.041 | 1.000 |
| 0.269 | 0.802 | 0.976 | 0.998 | 0.991 | 0.999 | 1.000 | ||||
| Asian | 3 | 0.91 | 0.364 | 0.911(0.744-1.115) | 0.78 | 0.677 | 0.00% | 0.366 | 0.999 | 0.524 | 0.767 | 0.973 | 0.997 | 1.000 | 0.997 | 1.000 | 1.000 | ||||
| Source of control | |||||||||||||||||||||
| HB | 2 | 1.03 | 0.315 | 1.16(0.873-1.541) | 1.54 | 0.214 | 35.10% | 0.306 | 0.962 | 0.488 | 0.741 | 0.969 | 0.997 | 1.000 | 0.996 | 1.000 | 1.000 | ||||
| PB | 3 | 0.77 | 0.440 | 1.05(0.928-1.189) | 3.74 | 0.154 | 46.50% | 0.442 | 1.000 | 0.570 | 0.799 | 0.978 | 0.998 | 1.000 | 0.998 | 1.000 | 1.000 | ||||
| 4G4G/4G5G+5G5G | |||||||||||||||||||||
| Overall | 7 | 0.82 | 0.409 | 1.044(0.943-1.155) | 10.36 | 0.11 | 42.10% | 1.8 | 0.072 | 0.46 | 0.662 | 0.404 | 1.000 | 0.548 | 0.784 | 0.976 | 0.998 | 1.000 | 0.999 | 1.000 | 1.000 |
| Ethnicity | |||||||||||||||||||||
| Caucasian | 4 | 1.73 | 0.083 | 1.112(0.986-1.254) | 4.74 | 0.192 | 36.70% | 0.083 | 1.000 | 0.200 | 0.429 | 0.892 | 0.988 | 0.999 | 0.995 | 1.000 | 1.000 | ||||
| Asian | 3 | 1.19 | 0.233 | 0.891(0.737-1.077) | 1.88 | 0.39 | 0.00% | 0.233 | 0.999 | 0.412 | 0.677 | 0.958 | 0.996 | 1.000 | 0.997 | 1.000 | 1.000 | ||||
| Source of control | |||||||||||||||||||||
| HB | 2 | 0.93 | 0.351 | 1.136(0.869-1.486) | 0.94 | 0.332 | 0.00% | 0.352 | 0.979 | 0.519 | 0.764 | 0.973 | 0.997 | 1.000 | 0.996 | 1.000 | 1.000 | ||||
| PB | 3 | 0.42 | 0.676 | 0.957(0.78-1.175) | 4.76 | 0.093 | 58.00% | 0.675 | 1.000 | 0.669 | 0.859 | 0.985 | 0.999 | 1.000 | 0.998 | 1.000 | 1.000 | ||||
| 4G4G+4G5G/5G5G | |||||||||||||||||||||
| Overall | 7 | 0.07 | 0.944 | 0.992(0.8-1.231) | 14.54 | 0.024 | 58.70% | 1.8 | 0.072 | 1.42 | 0.214 | 0.942 | 1.000 | 0.739 | 0.894 | 0.989 | 0.999 | 1.000 | 0.998 | 1.000 | 1.000 |
| Ethnicity | |||||||||||||||||||||
| Caucasian | 4 | 0.46 | 0.643 | 1.088(0.763-1.55) | 11.72 | 0.008 | 74.40% | 0.640 | 0.962 | 0.666 | 0.857 | 0.985 | 0.998 | 1.000 | 0.997 | 1.000 | 1.000 | ||||
| Asian | 3 | 0.8 | 0.423 | 0.909(0.721-1.147) | 2.74 | 0.254 | 27% | 0.421 | 0.996 | 0.559 | 0.792 | 0.977 | 0.998 | 1.000 | 0.997 | 1.000 | 1.000 | ||||
| Source of control | |||||||||||||||||||||
| HB | 2 | 0.11 | 0.913 | 0.985(0.743-1.304) | 0.35 | 0.556 | 0% | 0.916 | 0.997 | 0.734 | 0.892 | 0.989 | 0.999 | 1.000 | 0.997 | 1.000 | 1.000 | ||||
| PB | 3 | 1.89 | 0.059 | 0.875(0.761-1.005) | 1.34 | 0.512 | 0.00% | 0.059 | 1.000 | 0.150 | 0.346 | 0.853 | 0.983 | 0.998 | 0.993 | 0.999 | 1.000 | ||||
Abbreviations: OR, odds ratio; CI, confidence interval; PB, population-based; HB, hospital-based; FPRP, false positive report probability; BFDP, Bayesian False Discovery Probability.
a The results in bold represented there was statistically significant noteworthiness at 0.2 level by FPRP or 0.8 level by BFDP calculations.
bChi-square test was used to calculate the genotype and haplotype frequency distributions.
cStatistical power was the power to detect an odds ratio of 1.5 for the homozygotes with the rare genetic variant and 1 for the heterozygotes and for the homozygote with the common variant.
Stratified Analyses of the Rs2227631 and Rs2227667 Polymorphism on Cancer Risk.
| No. | Comparative model | Z |
| OR (95% CI) | Heterogeneity | FPRP | FPRP statistical powerb | FPRP prior probability | BFDP prior probability | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Heterogeneity chi-squared |
| I2 | Z | Begg’s test | t | Egger’s test | 0.25 | 0.1 | 0.01 | 0.001 | 0.0001 | 0.01 | 0.001 | 0.000001 | |||||||
| rs2227631 | |||||||||||||||||||||
| 5 | AA/GG | 0.43 | 0.665 | 0.925(0.65-1.316) | 15.46 | 0.004 | 74.10% | 0.24 | 0.806 | 0.71 | 0.527 | 0.665 | 0.966 | 0.674 | 0.861 | 0.986 | 0.999 | 1.000 | 0.997 | 1.000 | 1.000 |
| 5 | AA/AG | 0.14 | 0.888 | 0.975(0.686-1.386) | 18.71 | 0.001 | 78.60% | −0.24 | 1 | 0.46 | 0.68 | 0.869 | 0.994 | 0.724 | 0.887 | 0.989 | 0.999 | 1.000 | 0.997 | 1.000 | 1.000 |
| 5 | AA/AG+GG | 0.27 | 0.789 | 0.956(0.686-1.332) | 18.68 | 0.001 | 78.60% | −0.24 | 1 | 0.53 | 0.635 | 0.790 | 0.983 | 0.707 | 0.879 | 0.988 | 0.999 | 1.000 | 0.997 | 1.000 | 1.000 |
| 5 | AA+AG/GG | 1.23 | 0.220 | 0.932(0.832-1.043) | 1.23 | 0.874 | 0 | 0.73 | 0.462 | 1.18 | 0.323 | 0.220 | 1.000 | 0.398 | 0.664 | 0.956 | 0.995 | 1.000 | 0.998 | 1.000 | 1.000 |
| 5 | GG/AA | 0.43 | 0.665 | 1.081(0.760-1.538) | 15.46 | 0.004 | 74.10% | 0.24 | 0.806 | −0.71 | 0.527 | 0.665 | 0.966 | 0.674 | 0.861 | 0.986 | 0.999 | 1.000 | 0.997 | 1.000 | 1.000 |
| 5 | GG/GA | 0.88 | 0.379 | 1.055(0.936-1.190) | 0.98 | 0.913 | 0.00% | 0.73 | 0.462 | −0.48 | 0.665 | 0.383 | 1.000 | 0.535 | 0.775 | 0.974 | 0.997 | 1.000 | 0.998 | 1.000 | 1.000 |
| 5 | GG/GA+AA | 0.12 | 0.220 | 1.073(0.959-1.201) | 1.23 | 0.874 | 0.00% | 0.73 | 0.462 | −1.18 | 0.323 | 0.220 | 1.000 | 0.398 | 0.665 | 0.956 | 0.995 | 1.000 | 0.998 | 1.000 | 1.000 |
| 5 | GG+GA/AA | 0.27 | 0.789 | 1.046(0.751-1.459) | 18.68 | 0.001 | 78.6 | −0.24 | 1.000 | −0.53 | 0.635 | 0.791 | 0.983 | 0.707 | 0.879 | 0.988 | 0.999 | 1.000 | 0.997 | 1.000 | 1.000 |
| rs2227667 | |||||||||||||||||||||
| 4 | AA/GG | 1.69 | 0.091 | 0.649(0.393-1.071) | 21.76 | 0 | 86.20% | 1.02 | 0.308 | −1.88 | 0.201 | 0.091 | 0.458 | 0.373 | 0.641 | 0.951 | 0.995 | 0.999 | 0.986 | 0.999 | 1.000 |
| 4 | AA/AG | 0.11 | 0.911 | 0.980(0.687-1.398) | 21.33 | 0 | 85.90% | -0.34 | 1 | 0.24 | 0.831 | 0.911 | 0.983 | 0.735 | 0.893 | 0.989 | 0.999 | 1.000 | 0.997 | 1.000 | 1.000 |
| 4 | AA/AG+GG | 0.97 | 0.333 | 0.889(0.701-1.128) | 10.96 | 0.012 | 72.60% | −0.34 | 1 | −0.49 | 0.674 | 0.333 | 0.991 | 0.502 | 0.751 | 0.971 | 0.997 | 1.000 | 0.997 | 1.000 | 1.000 |
| 4 | AA+AG/GG | 1.42 | 0.157 | 0.687(0.409-1.155) | 29.77 | 0 | 89.90% | 1.02 | 0.308 | −1.25 | 0.338 | 0.157 | 0.545 | 0.463 | 0.721 | 0.966 | 0.997 | 1.000 | 0.990 | 0.999 | 1.000 |
| 4 | GG/AA | 1.69 | 0.091 | 1.541(0.933-2.546) | 21.76 | 0 | 86.20% | 1.02 | 0.308 | −1.88 | 0.201 | 0.091 | 0.458 | 0.374 | 0.642 | 0.952 | 0.995 | 0.999 | 0.987 | 0.999 | 1.000 |
| 4 | GG/GA | 1.30 | 0.194 | 1.529(0.806-2.898) | 40.1 | 0 | 92.5 | −0.34 | 1 | 0.24 | 0.831 | 0.193 | 0.477 | 0.549 | 0.785 | 0.976 | 0.998 | 1.000 | 0.991 | 0.999 | 1.000 |
| 4 | GG/GA+AA | 1.42 | 0.157 | 1.455(0.866-2.445) | 29.77 | 0 | 89.90% | 1.02 | 0.308 | −1.25 | 0.338 | 0.157 | 0.546 | 0.463 | 0.721 | 0.966 | 0.997 | 1.000 | 0.990 | 0.999 | 1.000 |
| 4 | GG+GA/AA | 0.97 | 0.333 | 1.124(0.887-1.426) | 10.96 | 0.012 | 72.60% | −0.34 | 1 | −0.49 | 0.674 | 0.336 | 0.991 | 0.504 | 0.753 | 0.971 | 0.997 | 1.000 | 0.997 | 1.000 | 1.000 |
Abbreviations: OR, odds ratio; CI, confidence interval; PB, population-based; HB, hospital-based; FPRP, false positive report probability; BFDP, Bayesian False Discovery Probability.
aChi-square test was used to calculate the genotype and haplotype frequency distributions.
bStatistical power was the power to detect an odds ratio of 1.5 for the homozygotes with the rare genetic variant and 1 for the heterozygotes and for the homozygote with the common variant.