Literature DB >> 34521224

Whole-genome sequencing as a first-tier diagnostic framework for rare genetic diseases.

Haseeb Nisar1,2, Bilal Wajid3,4,5, Samiah Shahid6, Faria Anwar7, Imran Wajid4, Asia Khatoon2, Mian Usman Sattar8, Saima Sadaf2.   

Abstract

Rare diseases affect nearly 300 million people globally with most patients aged five or less. Traditional diagnostic approaches have provided much of the diagnosis; however, there are limitations. For instance, simply inadequate and untimely diagnosis adversely affects both the patient and their families. This review advocates the use of whole genome sequencing in clinical settings for diagnosis of rare genetic diseases by showcasing five case studies. These examples specifically describe the utilization of whole genome sequencing, which helped in providing relief to patients via correct diagnosis followed by use of precision medicine.

Entities:  

Keywords:  Rare genetic disease; national health systems; next generation sequencing; precision medicine; whole genome sequencing; whole-exome sequencing

Mesh:

Year:  2021        PMID: 34521224      PMCID: PMC8669166          DOI: 10.1177/15353702211040046

Source DB:  PubMed          Journal:  Exp Biol Med (Maywood)        ISSN: 1535-3699


  65 in total

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Authors:  P A JACOBS; J A STRONG
Journal:  Nature       Date:  1959-01-31       Impact factor: 49.962

2.  Pearson syndrome and the role of deletion dimers and duplications in the mtDNA.

Authors:  L J A M Jacobs; R J E Jongbloed; F A Wijburg; J B C de Klerk; J P M Geraedts; J G Nijland; H R Scholte; I F M de Coo; H J M Smeets
Journal:  J Inherit Metab Dis       Date:  2004       Impact factor: 4.982

Review 3.  Atypical hemolytic-uremic syndrome.

Authors:  Marina Noris; Giuseppe Remuzzi
Journal:  N Engl J Med       Date:  2009-10-22       Impact factor: 91.245

4.  Dopa-responsive dystonia due to a large deletion in the GTP cyclohydrolase I gene.

Authors:  Y Furukawa; M Guttman; S P Sparagana; J M Trugman; K Hyland; P Wyatt; A E Lang; G A Rouleau; M Shimadzu; S J Kish
Journal:  Ann Neurol       Date:  2000-04       Impact factor: 10.422

5.  [Study of the BMPR2 gene in patients with pulmonary arterial hypertension].

Authors:  Karina Portillo; Salud Santos; Irene Madrigal; Isabel Blanco; Carles Paré; Luis Borderías; Victor I Peinado; Josep Roca; Monserrat Milà; Joan Albert Barberà
Journal:  Arch Bronconeumol       Date:  2010-01-21       Impact factor: 4.872

6.  Genetic heterogeneity in Niemann-Pick C disease: a study using somatic cell hybridization and linkage analysis.

Authors:  M T Vanier; S Duthel; C Rodriguez-Lafrasse; P Pentchev; E D Carstea
Journal:  Am J Hum Genet       Date:  1996-01       Impact factor: 11.025

7.  Comprehensive gene panels provide advantages over clinical exome sequencing for Mendelian diseases.

Authors: 
Journal:  Genome Biol       Date:  2015-06-26       Impact factor: 13.583

Review 8.  Case for genome sequencing in infants and children with rare, undiagnosed or genetic diseases.

Authors:  David Bick; Marilyn Jones; Stacie L Taylor; Ryan J Taft; John Belmont
Journal:  J Med Genet       Date:  2019-04-25       Impact factor: 6.318

9.  Optimal reference sequence selection for genome assembly using minimum description length principle.

Authors:  Bilal Wajid; Erchin Serpedin; Mohamed Nounou; Hazem Nounou
Journal:  EURASIP J Bioinform Syst Biol       Date:  2012-11-27

10.  The Medical Genome Initiative: moving whole-genome sequencing for rare disease diagnosis to the clinic.

Authors:  Christian R Marshall; David Bick; John W Belmont; Stacie L Taylor; Euan Ashley; David Dimmock; Vaidehi Jobanputra; Hutton M Kearney; Shashikant Kulkarni; Heidi Rehm
Journal:  Genome Med       Date:  2020-05-27       Impact factor: 11.117

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  2 in total

1.  A Formative Study of the Implementation of Whole Genome Sequencing in Northern Ireland.

Authors:  Katie Kerr; Caoimhe McKenna; Shirley Heggarty; Caitlin Bailie; Julie McMullan; Ashleen Crowe; Jill Kilner; Michael Donnelly; Saralynne Boyle; Gillian Rea; Cheryl Flanagan; Shane McKee; Amy Jayne McKnight
Journal:  Genes (Basel)       Date:  2022-06-21       Impact factor: 4.141

2.  Clinical genomics and precision medicine.

Authors:  Sérgio D J Pena; Eduardo Tarazona-Santos
Journal:  Genet Mol Biol       Date:  2022-10-10       Impact factor: 2.087

  2 in total

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