Literature DB >> 34520736

Mechanism of negative membrane curvature generation by I-BAR domains.

Binod Nepal1, Aliasghar Sepehri1, Themis Lazaridis2.   

Abstract

The membrane sculpting ability of BAR domains has been attributed to the intrinsic curvature of their banana-shaped dimeric structure. However, there is often a mismatch between this intrinsic curvature and the diameter of the membrane tubules generated. I-BAR domains are especially mysterious since they are almost flat but generate high negative membrane curvature. Here, we use atomistic implicit-solvent computer modeling to show that the membrane bending of the IRSp53 I-BAR domain is dictated by its higher oligomeric structure, whose curvature is completely unrelated to the intrinsic curvature of the dimer. Two other I-BARs give similar results, whereas a flat F-BAR sheet develops a concave membrane-binding interface, consistent with its observed positive membrane curvature generation. Laterally interacting helical spirals of I-BAR dimers on tube interiors are stable and have an enhanced binding energy that is sufficient for membrane bending to experimentally observed tubule diameters at a reasonable surface density.
Copyright © 2021 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  I-BAR; computer simulation; lipid bilayer; membrane curvature sensing and generation

Mesh:

Substances:

Year:  2021        PMID: 34520736      PMCID: PMC8642264          DOI: 10.1016/j.str.2021.07.010

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  81 in total

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7.  [A molecular dynamics study of the interaction between domain I-BAR of the IRSp53 protein and negatively charged membranes].

Authors:  O V Levtsova; I D Davletov; O S Sokolova; K V Shaĭtan
Journal:  Biofizika       Date:  2011 Mar-Apr

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Authors:  Themis Lazaridis
Journal:  Proteins       Date:  2005-02-15

9.  The DRY motif as a molecular switch of the human oxytocin receptor.

Authors:  Nicolas Favre; Francesca Fanelli; Marc Missotten; Anthony Nichols; Janet Wilson; Mariastella di Tiani; Christian Rommel; Alexander Scheer
Journal:  Biochemistry       Date:  2005-08-02       Impact factor: 3.162

10.  Structure and analysis of FCHo2 F-BAR domain: a dimerizing and membrane recruitment module that effects membrane curvature.

Authors:  William Mike Henne; Helen M Kent; Marijn G J Ford; Balachandra G Hegde; Oliver Daumke; P Jonathan G Butler; Rohit Mittal; Ralf Langen; Philip R Evans; Harvey T McMahon
Journal:  Structure       Date:  2007-06-01       Impact factor: 5.006

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