Literature DB >> 34520681

Back to the basics? Transcriptomics offers integrative insights into the role of space, time and the environment for gene expression and behaviour.

Eva K Fischer1,2, Mark E Hauber1,2, Alison M Bell1,2.   

Abstract

Fuelled by the ongoing genomic revolution, broadscale RNA expression surveys are fast replacing studies targeting one or a few genes to understand the molecular basis of behaviour. Yet, the timescale of RNA-sequencing experiments and the dynamics of neural gene activation are insufficient to drive real-time switches between behavioural states. Moreover, the spatial, functional and transcriptional complexity of the brain (the most commonly targeted tissue in studies of behaviour) further complicates inference. We argue that a Central Dogma-like 'back-to-basics' assumption that gene expression changes cause behaviour leaves some of the most important aspects of gene-behaviour relationships unexplored, including the roles of environmental influences, timing and feedback from behaviour-and the environmental shifts it causes-to neural gene expression. No perfect experimental solutions exist but we advocate that explicit consideration, exploration and discussion of these factors will pave the way toward a richer understanding of the complicated relationships between genes, environments, brain gene expression and behaviour over developmental and evolutionary timescales.

Entities:  

Keywords:  RNA-seq; behaviour; genomics; transcriptomics

Mesh:

Year:  2021        PMID: 34520681      PMCID: PMC8440035          DOI: 10.1098/rsbl.2021.0293

Source DB:  PubMed          Journal:  Biol Lett        ISSN: 1744-9561            Impact factor:   3.812


  45 in total

1.  THE REPRODUCTIVE BEHAVIOR OF RING DOVES.

Authors:  D S LEHRMAN
Journal:  Sci Am       Date:  1964-11       Impact factor: 2.142

2.  Ecotype differences in aggression, neural activity and behaviorally relevant gene expression in cichlid fish.

Authors:  Nicole M Baran; J Todd Streelman
Journal:  Genes Brain Behav       Date:  2020-05-08       Impact factor: 3.449

3.  Variable channel expression in identified single and electrically coupled neurons in different animals.

Authors:  David J Schulz; Jean-Marc Goaillard; Eve Marder
Journal:  Nat Neurosci       Date:  2006-01-29       Impact factor: 24.884

Review 4.  Genes as cues: phenotypic integration of genetic and epigenetic information from a Darwinian perspective.

Authors:  Sasha R X Dall; John M McNamara; Olof Leimar
Journal:  Trends Ecol Evol       Date:  2015-05-02       Impact factor: 17.712

5.  Phenotypic and genomic plasticity of alternative male reproductive tactics in sailfin mollies.

Authors:  Bonnie A Fraser; Ilana Janowitz; Margaret Thairu; Joseph Travis; Kimberly A Hughes
Journal:  Proc Biol Sci       Date:  2014-02-26       Impact factor: 5.349

Review 6.  miRNA regulation of social and anxiety-related behaviour.

Authors:  Ramanathan Narayanan; Gerhard Schratt
Journal:  Cell Mol Life Sci       Date:  2020-05-14       Impact factor: 9.261

7.  RNA-seq reveals differential gene expression in the brains of juvenile resident and migratory smolt rainbow trout (Oncorhynchus mykiss).

Authors:  Matthew C Hale; Garrett J McKinney; Frank P Thrower; Krista M Nichols
Journal:  Comp Biochem Physiol Part D Genomics Proteomics       Date:  2016-09-04       Impact factor: 2.674

8.  Gene expression profiles in the brain predict behavior in individual honey bees.

Authors:  Charles W Whitfield; Anne-Marie Cziko; Gene E Robinson
Journal:  Science       Date:  2003-10-10       Impact factor: 47.728

Review 9.  Specificity in sociogenomics: Identifying causal relationships between genes and behavior.

Authors:  Jenelys Ruiz-Ortiz; Jessica Tollkuhn
Journal:  Horm Behav       Date:  2020-11-02       Impact factor: 3.587

Review 10.  Advancing behavioural genomics by considering timescale.

Authors:  Clare C Rittschof; Kimberly A Hughes
Journal:  Nat Commun       Date:  2018-02-12       Impact factor: 14.919

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