Literature DB >> 34514887

Metabolomics as a Truly Translational Tool for Precision Medicine.

Julian C Schmidt1, Bonnie V Dougherty2, Richard D Beger3, Dean P Jones4, Michael A Schmidt1,5, William B Mattes3.   

Abstract

Metabolomics is unique among omics technologies in being applicable to metabolism and toxicity studies broadly across organisms (e.g., humans, other mammals, model organisms, and even bacteria) and across biological materials (e.g., blood, urine, saliva, biopsy, and stool), including cultured cells and subcellular fractions. Metabolomics can be used to characterize biologic response patterns in humans as well as to support mechanistic studies in model systems and ex vivo studies. A broad range of resources are available, including publicly accessible data repositories (e.g., Metabolomics Workbench), tools for biostatistics and bioinformatics (e.g., MetaboAnalyst), metabolite identification (e.g., Metlin), and pathway analysis (e.g., Kyoto Encyclopedia of Genes and Genomes). Thus, metabolomics is more than a promise of the future; metabolomics is already available as a translational approach to facilitate precision medicine. This ACT Symposium review will contain an introduction to metabolomics in toxicity studies followed by sections on translational metabolic networks, translational metabolite biomarkers of acetaminophen-induced acute liver injury, translational framework using high-resolution metabolomics for integrated pharmacokinetics and pharmacodynamics, and precision medicine applications: extracting actionable targets from untargeted metabolomics data following one year in space.

Entities:  

Keywords:  metabolomics; precision medicine; toxicity

Mesh:

Substances:

Year:  2021        PMID: 34514887      PMCID: PMC8443142          DOI: 10.1177/10915818211039436

Source DB:  PubMed          Journal:  Int J Toxicol        ISSN: 1091-5818            Impact factor:   2.032


  32 in total

1.  Postprandial serum bile acid for the detection of hepatobiliary disease.

Authors:  N Kaplowitz; E Kok; N B Javitt
Journal:  JAMA       Date:  1973-07-16       Impact factor: 56.272

2.  xMWAS: a data-driven integration and differential network analysis tool.

Authors:  Karan Uppal; Chunyu Ma; Young-Mi Go; Dean P Jones; Jonathan Wren
Journal:  Bioinformatics       Date:  2018-02-15       Impact factor: 6.937

3.  Pharmacometabonomic identification of a significant host-microbiome metabolic interaction affecting human drug metabolism.

Authors:  T Andrew Clayton; David Baker; John C Lindon; Jeremy R Everett; Jeremy K Nicholson
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-10       Impact factor: 11.205

Review 4.  The uremic toxicity of indoxyl sulfate and p-cresyl sulfate: a systematic review.

Authors:  Raymond Vanholder; Eva Schepers; Anneleen Pletinck; Evi V Nagler; Griet Glorieux
Journal:  J Am Soc Nephrol       Date:  2014-05-08       Impact factor: 10.121

5.  Perturbation of bile acid homeostasis is an early pathogenesis event of drug induced liver injury in rats.

Authors:  Makoto Yamazaki; Manami Miyake; Hiroko Sato; Naoya Masutomi; Naohisa Tsutsui; Klaus-Peter Adam; Danny C Alexander; Kay A Lawton; Michael V Milburn; John A Ryals; Jacob E Wulff; Lining Guo
Journal:  Toxicol Appl Pharmacol       Date:  2013-01-27       Impact factor: 4.219

6.  Comparison of Bile Acids and Acetaminophen Protein Adducts in Children and Adolescents with Acetaminophen Toxicity.

Authors:  Laura James; Ke Yan; Lisa Pence; Pippa Simpson; Sudeepa Bhattacharyya; Pritmohinder Gill; Lynda Letzig; Gregory Kearns; Richard Beger
Journal:  PLoS One       Date:  2015-07-24       Impact factor: 3.240

7.  Identification of a metabolic biomarker panel in rats for prediction of acute and idiosyncratic hepatotoxicity.

Authors:  Jinchun Sun; Svetoslav Slavov; Laura K Schnackenberg; Yosuke Ando; James Greenhaw; Xi Yang; William Salminen; Donna L Mendrick; Richard Beger
Journal:  Comput Struct Biotechnol J       Date:  2014-08-09       Impact factor: 7.271

8.  Metabolomics Analysis of Urine Samples from Children after Acetaminophen Overdose.

Authors:  Laura K Schnackenberg; Jinchun Sun; Sudeepa Bhattacharyya; Pritmohinder Gill; Laura P James; Richard D Beger
Journal:  Metabolites       Date:  2017-09-06

Review 9.  Mitochondrial network responses in oxidative physiology and disease.

Authors:  Young-Mi Go; Jolyn Fernandes; Xin Hu; Karan Uppal; Dean P Jones
Journal:  Free Radic Biol Med       Date:  2018-01-06       Impact factor: 7.376

Review 10.  Current Concepts in Pharmacometabolomics, Biomarker Discovery, and Precision Medicine.

Authors:  Richard D Beger; Michael A Schmidt; Rima Kaddurah-Daouk
Journal:  Metabolites       Date:  2020-03-27
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