Literature DB >> 34513241

Layer-based, depth-resolved computation of attenuation coefficients and backscattering fractions in tissue using optical coherence tomography.

Taylor M Cannon1,2, Brett E Bouma1,2, Néstor Uribe-Patarroyo2.   

Abstract

Structural optical coherence tomography (OCT) images of tissue stand to benefit from greater functionalization and quantitative interpretation. The OCT attenuation coefficient µ, an analogue of the imaged sample's scattering coefficient, offers potential functional contrast based on the relationship of µ to sub-resolution physical properties of the sample. Attenuation coefficients are computed either by fitting a representative µ over several depth-wise pixels of a sample's intensity decay, or by using previously-developed depth-resolved attenuation algorithms by Girard et al. [Invest. Ophthalmol. Vis. Sci.52, 7738 (2011). 10.1167/iovs.10-6925] and Vermeer et al. [Biomed. Opt. Express5, 322 (2014). 10.1364/BOE.5.000322]. However, the former method sacrifices axial information in the tomogram, while the latter relies on the stringent assumption that the sample's backscattering fraction, another optical property, does not vary along depth. This assumption may be violated by layered tissues commonly observed in clinical imaging applications. Our approach preserves the full depth resolution of the attenuation map but removes its dependence on backscattering fraction by performing signal analysis inside individual discrete layers over which the scattering properties (e.g., attenuation and backscattering fraction) vary minimally. Although this approach necessitates the detection of these layers, it removes the constant-backscattering-fraction assumption that has constrained quantitative attenuation coefficient analysis in the past, and additionally yields a layer-resolved backscattering fraction, providing complementary scattering information to the attenuation coefficient. We validate our approach using automated layer detection in layered phantoms, for which the measured optical properties were in good agreement with theoretical values calculated with Mie theory, and show preliminary results in tissue alongside corresponding histological analysis. Together, accurate backscattering fraction and attenuation coefficient measurements enable the estimation of both particle density and size, which is not possible from attenuation measurements alone. We hope that this improvement to depth-resolved attenuation coefficient measurement, augmented by a layer-resolved backscattering fraction, will increase the diagnostic power of quantitative OCT imaging.
© 2021 Optical Society of America under the terms of the OSA Open Access Publishing Agreement.

Entities:  

Year:  2021        PMID: 34513241      PMCID: PMC8407832          DOI: 10.1364/BOE.427833

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.562


  29 in total

1.  Detection of multiple scattering in optical coherence tomography by speckle correlation of angle-dependent B-scans.

Authors:  Timothy R Hillman; Andrea Curatolo; Brendan F Kennedy; David D Sampson
Journal:  Opt Lett       Date:  2010-06-15       Impact factor: 3.776

2.  Light scattering and morphology of the lymphocyte as applied to flow cytometry for distinguishing healthy and infected individuals.

Authors:  Gennady I Ruban; Vladimir V Berdnik; Dmitry V Marinitch; Natalia V Goncharova; Valery A Loiko
Journal:  J Biomed Opt       Date:  2010 Sep-Oct       Impact factor: 3.170

3.  Optical scattering properties of soft tissue: a discrete particle model.

Authors:  J M Schmitt; G Kumar
Journal:  Appl Opt       Date:  1998-05-01       Impact factor: 1.980

4.  Characterization of atherosclerosis plaques by measuring both backscattering and attenuation coefficients in optical coherence tomography.

Authors:  Chenyang Xu; Joseph M Schmitt; Stephane G Carlier; Renu Virmani
Journal:  J Biomed Opt       Date:  2008 May-Jun       Impact factor: 3.170

5.  Shadow removal and contrast enhancement in optical coherence tomography images of the human optic nerve head.

Authors:  Michaël J A Girard; Nicholas G Strouthidis; C Ross Ethier; Jean Martial Mari
Journal:  Invest Ophthalmol Vis Sci       Date:  2011-09-29       Impact factor: 4.799

6.  Automatic attenuation compensation for ultrasonic imaging.

Authors:  D I Hughes; F A Duck
Journal:  Ultrasound Med Biol       Date:  1997       Impact factor: 2.998

7.  Depth-resolved model-based reconstruction of attenuation coefficients in optical coherence tomography.

Authors:  K A Vermeer; J Mo; J J A Weda; H G Lemij; J F de Boer
Journal:  Biomed Opt Express       Date:  2013-12-23       Impact factor: 3.732

8.  Forward multiple scattering dominates speckle decorrelation in whole-blood flowmetry using optical coherence tomography.

Authors:  Natalie G Ferris; Taylor M Cannon; Martin Villiger; Brett E Bouma; Néstor Uribe-Patarroyo
Journal:  Biomed Opt Express       Date:  2020-03-13       Impact factor: 3.732

9.  Attenuation Coefficients From SD-OCT Data: Structural Information Beyond Morphology on RNFL Integrity in Glaucoma.

Authors:  Gijs Thepass; Hans G Lemij; Koenraad A Vermeer
Journal:  J Glaucoma       Date:  2017-11       Impact factor: 2.503

10.  Automated tissue characterization of in vivo atherosclerotic plaques by intravascular optical coherence tomography images.

Authors:  Giovanni Jacopo Ughi; Tom Adriaenssens; Peter Sinnaeve; Walter Desmet; Jan D'hooge
Journal:  Biomed Opt Express       Date:  2013-06-04       Impact factor: 3.732

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  1 in total

1.  Deep convolutional neural network-based scatterer density and resolution estimators in optical coherence tomography.

Authors:  Thitiya Seesan; Ibrahim Abd El-Sadek; Pradipta Mukherjee; Lida Zhu; Kensuke Oikawa; Arata Miyazawa; Larina Tzu-Wei Shen; Satoshi Matsusaka; Prathan Buranasiri; Shuichi Makita; Yoshiaki Yasuno
Journal:  Biomed Opt Express       Date:  2021-12-07       Impact factor: 3.732

  1 in total

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