| Literature DB >> 34511905 |
Krzysztof Marycz1,2, Agnieszka Śmieszek1, Katarzyna Kornicka-Garbowska1,2, Ariadna Pielok1, Maciej Janeczek3, Anna Lipińska3, Anna Nikodem4, Jarosław Filipiak4, Paulina Sobierajska5, Jean-Marie Nedelec6, Rafał J Wiglusz2,5.
Abstract
PURPOSE: Healing of osteoporotic defects is challenging and requires innovative approaches to elicit molecular mechanisms promoting osteoblasts-osteoclasts coupling and bone homeostasis.Entities:
Keywords: iron oxide nanoparticles; nanohydroxyapatite; osteoblasts; osteoclasts; senile osteoporosis; small non-coding RNA
Mesh:
Substances:
Year: 2021 PMID: 34511905 PMCID: PMC8418301 DOI: 10.2147/IJN.S316240
Source DB: PubMed Journal: Int J Nanomedicine ISSN: 1176-9114
The Characterisation of Primers Used for RT-qPCR Analyses
| Gene | Primer Sequence 5ʹ-3’ | Annealing Temperature [°C] | Accesion No. of Sequence |
|---|---|---|---|
| F: GGATCCAGGATAACGGAGGC | 58.8 | NM_000633.2 | |
| R: ATGCACCCAGAGTGATGCAG | |||
| F: AGGATGCGTCCACCAAGAAGC | 58.8 | NM_001291428.1 | |
| R: GGTTCTGATCAGCTCGGGCA | |||
| F:TCCGAAATGCCTCTGCTGTT | 58.8 | NM_001271630.1 | |
| R:GCCACTTGGGGAGGATTTGT | |||
| F: AGACCATGCAGAGAGCGAG | 57.3 | NM_001204203.1 | |
| R: GCCCTTTCCGTTGTTGTCCT | |||
| F: AGCCTTCAGGAATGATGCCAC | 51.2 | NM_024449.6 | |
| R: CTTTGGCGTCATAGGGATGG | |||
| F: CCCAGAGGCACAGGCAAATA | 60.0 | NM_001359013.1 | |
| R: TCCTCCCCAATGTCCTTCTT | |||
| F: CTCCTGAGAGTCTGACAAAGCCTT | 58.8 | NM_007541.3 | |
| R: GCTGTGACATCCATTACTTGC | |||
| F: AACGTGGCCAAGAACATCATCA | 58.8 | NM_007431.3 | |
| R: TGTCCATCTCCAGCCGTGTC | |||
| F:CAGGGTATTGCTGGACAACGTG | 61.4 | NM_007742.4 | |
| R:GGACCTTGTTTGCCAGGTTCA | |||
| F: TAACAGCAAGGTGGATGAAATCT | 60.0 | NM_011613.3 | |
| R: CTGTAGGATCGAGAGGGAGGTAT | |||
| F: GTCTCTGGGGGACAATTTCTACT | 58.8 | XM_006509945.3 | |
| R: GTTTGTACGTGGAATTTTGAAGC | |||
| F: TGCACCACCAACTGCTTAG | 58.8 | XM_017321385.2 | |
| R: GGATGCAGGGATGATGTTC | |||
| TGGAAGACTAGTGATTTTGTTGT | 58.8 | MIMAT0000677 | |
| CAAAGTGCTTACAGTGCAGGTAG | 58.8 | MIMAT0000649 | |
| TAGCTTATCAGACTGATGTTGA | 58.8 | MIMAT0000530 | |
| TAAGGCACGCGGTGAATGCC | 58.8 | MIMAT0000134 | |
| TGTCAGTTTGTCAAATACCCCA | 58.8 | MIMAT0000280 | |
| AAAAGCTGGGTTGAGAGGGCGA | 58.8 | MI0000704 |
Abbreviations: nHAp, nanohydroxyapatite; IOs, iron oxide nanoparticles; miR, microRNA; RT-qPCR, quantitative polymerase chain reaction followed by reverse transcription; XRPD, X-ray powder diffraction; MF, magnetic field; Runx-2, runt-related transcription factor 2; Coll-1, collagen type 1; OPG, osteoprotegerin; Bcl-2, B-cell lymphoma 2; BAX, Bcl-2 associated X protein; Sost, sclerostin; Dmp1, dentin matrix protein 1; TRAP, tartrate-resistant acid phosphatase; OPN, osteopontin; ALP, alkaline phosphatase; CAII, anhydrase II; Ctsk, cathepsin K; Gapdh, glyceraldehyde 3-phosphate dehydrogenase; snU6, small nuclear; RNA OCN, osteonectin; ECM, extracellular matrix; DAPI, [4ʹ,6-diamidino-2-phenylindole].
Figure 1Obtained nanocomposites are cytocompatible and promote survival and metabolism of MC3T3-E1/4B12 co-cultures. (A) Confocal imaging of the cultures growth pattern and ultrastructure propagated without and under magnetic field influence. Scale bar = 30 μm. (B) The transcript levels for Bax determined with RT-qPCR technique. (C) Measurement of mRNA expression for Bcl-2. (D) The relative Bax/Bcl-2 ratio. (E) Metabolism of cells determined based on mitochondrial enzymes activity. Obtained data were used for comparative analysis and presented as columns with bars representing means ± SD. Marks: *p<0.05; **p < 0.01; ***p<0.001 and non-significant differences were indicated using ns symbol. The differences between nHAp/IO and nHAp/IO@miR-21/124 were marked with red font.
Figure 2Nanocomposite nHAp/IO@miR-21/124 enhances osteogenic differentiation in MC3T3-E1/4B12 co-cultures. (A) Representative pictures of osteogenic nodules formed during the differentiation. Scale bars indicated in the photographs. (B) Comparison of Alizarin Red staining intensity. Obtained data were used for comparative analysis and presented as columns with bars representing means ± SD. Marks: * p<0.05; ** p < 0.01; *** p<0.001 and non-significant differences were indicated using ns symbol. The differences between nHAp/IO and nHAp/IO@miR-21/124 were marked with red font.
Figure 3Nanocomposite nHAp/IO@miR-21/124 modulates the mRNA expression for pro-osteogenic transcripts inducing osteocyte-like phenotype characteristic in mineralised tissue. RT-PCR analysis of (A) sclerostin (Sost), (B) dentin matrix protein 1 (Dmp1). (C) alkaline phosphate (Alp). (D) osteocalcin (Ocn). (E) collagen type 1 (Coll-1). (F) cathepsin (K) (Ctsk). (G) Tartrate-resistant acid phosphatase (Trap). Relative quantification was performed in reference to the sample with the lowest expression of the target gene (RQmax) after normalisation to glyceraldehyde 3-phosphate dehydrogenase (Gapdh). Normalised values are presented as columns with bars representing means ± SD. Marks: *p<0.05; **p < 0.01; ***p<0.001 and non-significant differences were indicated using ns symbol. The differences between nHAp/IO and nHAp/IO@miR-21/124 were marked with red font.
Figure 5The expression of runt-related transcription factor (Runx-2) is modulated by nanocomposites and exposition to the magnetic field. (A) Quantification of Runx-2 transcripts determined using RT-qPCR. (B) Representative blots showing the intracellular accumulation of RUNX-2 and reference protein, ie β-actin. (C) Results of densitometric measurement of protein expression, performed for bands corresponding with 65kDA RUNX-2. (D) Results of densitometric measurement of protein expression, performed for bands corresponding with 55kDA RUNX-2. Normalised values are presented as columns with bars representing means ± SD. Marks: *p<0.05; **p < 0.01; ***p<0.001 and non-significant differences were indicated using ns symbol. The differences between nHAp/IO and nHAp/IO@miR-21/124 were marked with red font.
Figure 7The expression of osteopontin (OPN) is regulated by nanocomposites and exposition to the magnetic field. (A) Determination of mRNA levels for Opn using RT-qPCR. (B) Representative blots showing the intracellular accumulation of OPN with reference to β-actin (ACTB) expression. (C) Results of densitometric measurement of protein expression, performed for bands corresponding with 66kDA OPN. (D) Results of densitometric measurement of protein expression, performed for bands corresponding with 30kDA OPN. Normalised values are presented as columns with bars representing means ± SD. Marks: *p<0.05; **p < 0.01; ***p<0.001 and non-significant differences were indicated using ns symbol. The differences between nHAp/IO and nHAp/IO@miR-21/124 were marked with red font.
Figure 8The intracellular distribution of osteopontin (OPN) determined using immunocytochemistry. (A) Representative microphotographs obtained by confocal imaging, showing colocalization of OPN with nuclei (DAPI, blue-stained). (B) Results of signal intensity analysis performed to compare the influence of experimental conditions on OPN expression. Obtained values are presented as columns with bars representing means ± SD. Marks: *p<0.05 and ***p<0.001. The differences between nHAp/IO and nHAp/IO@miR-21/124 were marked with red font.
Figure 4Nanocomposite nHAp/IO@miR-21/124 regulates expression of small non-coding RNA (miRNA) involved in osteogenic differentiation. RT-PCR analysis of (A) miR-21-5p. (B) miR-124-3p. (C) miR-7a-5p. (D) miR-17-5p. (E) miR-223-3p and (F) miR-320a-3p. Relative quantification of miRNA levels was made regarding to the sample with the lowest expression of the miRNA transcripts (RQmax) after normalisation to non-coding small nuclear RNA (snU6). Normalised values are presented as columns with bars representing means ± SD. Marks: *p<0.05; **p < 0.01; ***p<0.001 and non-significant differences were indicated using ns symbol. The differences between nHAp/IO and nHAp/IO@miR-21/124 were marked with red font.
Figure 6The intracellular distribution of RUNX-2. (A) Representative microphotographs obtained by confocal imaging, showing colocalization of RUNX-2 with nuclei (DAPI, blue-stained) and actin cytoskeleton (phalloidin Atto-488, green-stained). (B) Results of signal intensity analysis performed to compare the influence of experimental conditions on RUNX-2 expression. Obtained values are presented as columns with bars representing means ± SD. Marks: ***p<0.001. The differences between nHAp/IO and nHAp/IO@miR-21/124 were marked with red font.
Figure 9Nanocomposite, nHAp/IO@miR-21/124 increase bone density in vivo. MicroCT reconstructions of the burr holes in the control defect (CTRL) and the burr holes with the nanocomposite (nHAp/IO@miR-21/124). (A) Top surface of the cranial bone. (B) Bottom view of the regenerated bone. (C) Side picture of the regenerated cranial bone. (D) Results of comparative analysis of bone volume per total volume ratio (BV/TV) in the repaired cranial defect area of the animals, ie mice Balb/c stain and osteoporotic model, ie SAM/P6 mice. Marks: *p<0.05; and ***p<0.001.