Literature DB >> 34507994

Optimal ligand discrimination by asymmetric dimerization and turnover of interferon receptors.

Patrick Binder1,2,3, Nikolas D Schnellbächer1,2, Thomas Höfer2,3, Nils B Becker4,3, Ulrich S Schwarz5,2.   

Abstract

In multicellular organisms, antiviral defense mechanisms evoke a reliable collective immune response despite the noisy nature of biochemical communication between tissue cells. A molecular hub of this response, the interferon I receptor (IFNAR), discriminates between ligand types by their affinity regardless of concentration. To understand how ligand type can be decoded robustly by a single receptor, we frame ligand discrimination as an information-theoretic problem and systematically compare the major classes of receptor architectures: allosteric, homodimerizing, and heterodimerizing. We demonstrate that asymmetric heterodimers achieve the best discrimination power over the entire physiological range of local ligand concentrations. This design enables sensing of ligand presence and type, and it buffers against moderate concentration fluctuations. In addition, receptor turnover, which drives the receptor system out of thermodynamic equilibrium, allows alignment of activation points for ligands of different affinities and thereby makes ligand discrimination practically independent of concentration. IFNAR exhibits this optimal architecture, and our findings thus suggest that this specialized receptor can robustly decode digital messages carried by its different ligands.

Entities:  

Keywords:  cell–cell communication; immune response; information theory; robust sensing; signal transduction

Mesh:

Substances:

Year:  2021        PMID: 34507994      PMCID: PMC8449373          DOI: 10.1073/pnas.2103939118

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  57 in total

1.  Membrane clustering and the role of rebinding in biochemical signaling.

Authors:  Andrew Mugler; Aimee Gotway Bailey; Koichi Takahashi; Pieter Rein ten Wolde
Journal:  Biophys J       Date:  2012-03-06       Impact factor: 4.033

2.  Determination of the two-dimensional interaction rate constants of a cytokine receptor complex.

Authors:  Martynas Gavutis; Eva Jaks; Peter Lamken; Jacob Piehler
Journal:  Biophys J       Date:  2006-02-10       Impact factor: 4.033

3.  Phenotypic model for early T-cell activation displaying sensitivity, specificity, and antagonism.

Authors:  Paul François; Guillaume Voisinne; Eric D Siggia; Grégoire Altan-Bonnet; Massimo Vergassola
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-19       Impact factor: 11.205

4.  Absolute Ligand Discrimination by Dimeric Signaling Receptors.

Authors:  Sepehr Fathi; Chitra R Nayak; Jordan J Feld; Anton G Zilman
Journal:  Biophys J       Date:  2016-09-06       Impact factor: 4.033

5.  Preassembly of interleukin 2 (IL-2) receptor subunits on resting Kit 225 K6 T cells and their modulation by IL-2, IL-7, and IL-15: a fluorescence resonance energy transfer study.

Authors:  S Damjanovich; L Bene; J Matkó; A Alileche; C K Goldman; S Sharrow; T A Waldmann
Journal:  Proc Natl Acad Sci U S A       Date:  1997-11-25       Impact factor: 11.205

Review 6.  Dimerization of cell surface receptors in signal transduction.

Authors:  C H Heldin
Journal:  Cell       Date:  1995-01-27       Impact factor: 41.582

Review 7.  Cytokine-mediated communication: a quantitative appraisal of immune complexity.

Authors:  Grégoire Altan-Bonnet; Ratnadeep Mukherjee
Journal:  Nat Rev Immunol       Date:  2019-04       Impact factor: 53.106

8.  Scaffold-mediated nucleation of protein signaling complexes: elementary principles.

Authors:  Jin Yang; William S Hlavacek
Journal:  Math Biosci       Date:  2011-06-12       Impact factor: 2.144

9.  Basal ubiquitin-independent internalization of interferon alpha receptor is prevented by Tyk2-mediated masking of a linear endocytic motif.

Authors:  K G Suresh Kumar; Bentley Varghese; Anamika Banerjee; Darren P Baker; Stefan N Constantinescu; Sandra Pellegrini; Serge Y Fuchs
Journal:  J Biol Chem       Date:  2008-05-12       Impact factor: 5.157

10.  Simple biochemical networks allow accurate sensing of multiple ligands with a single receptor.

Authors:  Vijay Singh; Ilya Nemenman
Journal:  PLoS Comput Biol       Date:  2017-04-14       Impact factor: 4.475

View more
  1 in total

1.  Deciphering signal transduction networks in the liver by mechanistic mathematical modelling.

Authors:  Lorenza A D'Alessandro; Ursula Klingmüller; Marcel Schilling
Journal:  Biochem J       Date:  2022-06-30       Impact factor: 3.766

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.