Literature DB >> 34505116

Sensitivity and specificity of a Bayesian single trial analysis for time varying neural signals.

Jeff T Mohl1,2,3, Valeria C Caruso1,2,3,4,5, Surya T Tokdar1,6, Jennifer M Groh1,2,3,4.   

Abstract

We recently reported the existence of fluctuations in neural signals that may permit neurons to code multiple simultaneous stimuli sequentially across time [1]. This required deploying a novel statistical approach to permit investigation of neural activity at the scale of individual trials. Here we present tests using synthetic data to assess the sensitivity and specificity of this analysis. We fabricated datasets to match each of several potential response patterns derived from single-stimulus response distributions. In particular, we simulated dual stimulus trial spike counts that reflected fluctuating mixtures of the single stimulus spike counts, stable intermediate averages, single stimulus winner-take-all, or response distributions that were outside the range defined by the single stimulus responses (such as summation or suppression). We then assessed how well the analysis recovered the correct response pattern as a function of the number of simulated trials and the difference between the simulated responses to each "stimulus" alone. We found excellent recovery of the mixture, intermediate, and outside categories (>97% correct), and good recovery of the single/winner-take-all category (>90% correct) when the number of trials was >20 and the single-stimulus response rates were 50Hz and 20Hz respectively. Both larger numbers of trials and greater separation between the single stimulus firing rates improved categorization accuracy. These results provide a benchmark, and guidelines for data collection, for use of this method to investigate coding of multiple items at the individual-trial time scale.

Entities:  

Keywords:  multiple stimuli; single trial analysis; statistical models; validation

Year:  2020        PMID: 34505116      PMCID: PMC8425354     

Source DB:  PubMed          Journal:  Neuron Behav Data Anal Theory


  31 in total

1.  Theta-paced flickering between place-cell maps in the hippocampus.

Authors:  Karel Jezek; Espen J Henriksen; Alessandro Treves; Edvard I Moser; May-Britt Moser
Journal:  Nature       Date:  2011-09-28       Impact factor: 49.962

2.  Central auditory neurons have composite receptive fields.

Authors:  Andrei S Kozlov; Timothy Q Gentner
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-19       Impact factor: 11.205

3.  Thalamo-cortical interactions modeled by weakly connected oscillators: could the brain use FM radio principles?

Authors:  F C Hoppensteadt; E M Izhikevich
Journal:  Biosystems       Date:  1998 Sep-Dec       Impact factor: 1.973

4.  Does attenuated divisive normalization affect gaze processing in autism spectrum disorder? A commentary on Palmer et al. (2018).

Authors:  Ari Rosenberg; Adhira Sunkara
Journal:  Cortex       Date:  2018-07-31       Impact factor: 4.027

5.  Summation and division by neurons in primate visual cortex.

Authors:  M Carandini; D J Heeger
Journal:  Science       Date:  1994-05-27       Impact factor: 47.728

Review 6.  Multineuronal codes in retinal signaling.

Authors:  M Meister
Journal:  Proc Natl Acad Sci U S A       Date:  1996-01-23       Impact factor: 11.205

Review 7.  The normalization model of attention.

Authors:  John H Reynolds; David J Heeger
Journal:  Neuron       Date:  2009-01-29       Impact factor: 17.173

Review 8.  The θ-γ neural code.

Authors:  John E Lisman; Ole Jensen
Journal:  Neuron       Date:  2013-03-20       Impact factor: 17.173

9.  Amplification of trial-to-trial response variability by neurons in visual cortex.

Authors:  Matteo Carandini
Journal:  PLoS Biol       Date:  2004-08-24       Impact factor: 8.029

10.  Single neurons may encode simultaneous stimuli by switching between activity patterns.

Authors:  Valeria C Caruso; Jeff T Mohl; Christopher Glynn; Jungah Lee; Shawn M Willett; Azeem Zaman; Akinori F Ebihara; Rolando Estrada; Winrich A Freiwald; Surya T Tokdar; Jennifer M Groh
Journal:  Nat Commun       Date:  2018-07-13       Impact factor: 14.919

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  1 in total

1.  Multiple sounds degrade the frequency representation in monkey inferior colliculus.

Authors:  Shawn M Willett; Jennifer M Groh
Journal:  Eur J Neurosci       Date:  2021-12-30       Impact factor: 3.698

  1 in total

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