| Literature DB >> 34504789 |
Dongdong Xiao1, Zhen Zhao1, Jun Liu2, Xuan Wang1, Peng Fu1, Jehane Michael Le Grange3, Jihua Wang4, Xuebing Guo5, Hongyang Zhao1, Jiawei Shi6,7,8, Pengfei Yan1, Xiaobing Jiang1.
Abstract
BACKGROUND: Meningioma invasion can be preoperatively recognized by radiomics features, which significantly contributes to treatment decision-making. Here, we aimed to evaluate the comparative performance of radiomics signatures derived from varying regions of interests (ROIs) in predicting BI and ascertaining the optimal width of the peritumoral regions needed for accurate analysis.Entities:
Keywords: brain invasion; magnetic resonance images; meningioma; peritumoral regions; prediction; radiomics
Year: 2021 PMID: 34504789 PMCID: PMC8422846 DOI: 10.3389/fonc.2021.708040
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244
Figure 1Patient selection criteria.
Figure 2Images show the BTI, WT, and Com radiomics of invasive meningioma at CE-T1W MR image.
Figure 3The overall predictive performance of invasive meningioma in different ROI areas between two independent cohort. (A) Patients were split into the XHH cohort (n = 505) and the THH cohort (n = 214). (B) During feature selection and classifier establishment, fivefold cross-validations of 100 sampling without replacement were used. (C) Schematic representation of feature selection and classifier building. (D, E) Violin plot of the AUC value distribution of different ROI areas in the XHH cohort (left side) and the THH cohort (right side). ****p < 0.0001.
Baseline characteristics of the patients in the different cohorts.
| XHH (training and internal validation cohorts) | THH (external validation cohort) | |||||
|---|---|---|---|---|---|---|
| Noninvasive | Invasive |
| Noninvasive | Invasive |
| |
|
| 400 | 105 | 165 | 49 | ||
| Age | ||||||
| Median [IQR] | 53.0 [47.0, 60.0] | 55.0 [49.0, 61.0] | 0.109 | 52.0 [47.0, 60.0] | 54.0 [48.0, 60.0] | 0.146 |
| Sex (%) | ||||||
| Male | 81 (20.2) | 38 (36.2) | 0.001 | 45 (27.3) | 12 (24.5) | 0.839 |
| Female | 319 (79.8) | 67 (63.8) | 120 (72.7) | 37 (75.5) | ||
| WHO grade (%) | ||||||
| I | 372 (93.0) | 65 (61.9) | <0.001 | 156 (94.5) | 31 (63.3) | <0.001 |
| II | 28 (7.0) | 33 (31.4) | 7 (4.2) | 17 (34.7) | ||
| III | 0 (0.0) | 7 (6.7) | 2 (1.2) | 1 (2.0) | ||
| Laboratory test, (median [IQR]) | ||||||
| WBC (×109/L) | 6.18 [4.90, 8.84] | 6.22 [4.95, 7.82] | 0.646 | 5.77 [4.70, 7.32] | 5.55 [4.33, 8.13] | 0.587 |
| Erythrocyte (×109/L) | 4.22 [3.83, 4.56] | 4.25 [3.93, 4.53] | 0.773 | 4.22 (0.52) | 4.14 (0.52) | 0.380 |
| Hemoglobin (g/L) | 125 [115, 135] | 126 [117, 137] | 0.446 | 126 [116, 137] | 127 [115, 135] | 0.708 |
| Platelet (×109/L) | 195 [155, 238] | 202 [162, 235] | 0.667 | 197 [159, 238] | 189 [161, 236] | 0.660 |
| Neutrophil (×109/L) | 3.74 [2.70, 6.79] | 3.62 [2.78, 5.58] | 0.714 | 3.50 [2.58, 5.31] | 3.33 [2.49, 5.61] | 0.750 |
| Lymphocyte (×109/L) | 1.56 [1.04, 1.97] | 1.52 [1.08, 1.95] | 0.820 | 1.64 [1.26, 1.95] | 1.52 [1.10, 1.80] | 0.342 |
| Monocyte (×109/L) | 0.38 [0.28, 0.49] | 0.42 [0.33, 0.56] | 0.003 | 0.35 [0.28, 0.47] | 0.37 [0.32, 0.44] | 0.416 |
| Albumin (g/L) | 40.1 [36.0, 43.0] | 38.8 [35.6, 42.1] | 0.101 | 40.6 [37.9, 42.8] | 40.1 [38.3, 43.3] | 0.684 |
| FIB (g/L) | 2.89 [2.52, 3.33] | 2.89 [2.62, 3.33] | 0.629 | 3.10 [2.75, 3.65] | 3.11 [2.79, 3.69] | 0.943 |
| Magnetic resonance imaging | ||||||
| TV (median [IQR]; ml) | 21.8 [7.7, 46.1] | 30.1 [13.9, 54.4] | 0.021 | 16.6 [7.9, 37.3] | 36.7 [16.7, 62.9] | <0.001 |
| PEV (median [IQR]; ml) | 16.0 [4.6, 51.3] | 51.3 [17.4, 114.3] | <0.001 | 8.8 [2.9, 29.3] | 41.9 [12.0, 83.1] | <0.001 |
IQR, interquartile range; WBC, white blood cell; FIB, fibrinogen; TV, tumor volume; PEV, peritumoral edema volume.
Figure 4The receiver operating characteristic curves when applying the backward stepwise LR algorithm. (A) Patients were split into the XHH cohort (n = 505). (B, C) Feature selection, reduction and classifier establishment. (D) After feature reselection and PCA dimensional reduction, models were obtained based on principal components.
Figure 5Decision curve analysis of BTI4mm model for invasion diagnosis. For the training and validation sets, the net benefit curve is shown. When threshold probability reached 0.20, the clinical benefit of the models was the greatest.
Diagnostic performance of classifiers.
| Parameter | Combined model | Clinical model | Radiomics model |
|---|---|---|---|
| Peritumoral edema volume + interface radiomics (4 mm) | Peritumoral edema volume | Interface radiomics (4 mm) | |
| Training sets | |||
| TN/FP/FN/TP | 255/68/13/68 | 248/72/43/41 | 253/70/13/68 |
| AUC | 0.898 (0.857, 0.939) | 0.702 (0.639, 0.765) | 0.891 (0.85, 0.932) |
| Accuracy | 0.8 (0.757, 0.837) | 0.715 (0.669, 0.759) | 0.795 (0.752, 0.833) |
| Sensitivity/recall | 0.84 | 0.488 | 0.84 |
| Specificity | 0.789 | 0.775 | 0.783 |
| PPV/precision | 0.5 | 0.363 | 0.493 |
| NPV | 0.951 | 0.852 | 0.951 |
| NRI (categorical) | Ref | NA | −0.04 (−0.10, −0.03) |
| NRI (continuous) | Ref | NA | −0.43 (−0.66, −0.19) |
| IDI | Ref | NA | −0.03 (−0.06, 0) |
| Internal validation sets | |||
| TN/FP/FN/TP | 64/13/4/20 | 64/16/15/6 | 64/13/5/19 |
| AUC (95% CI) | 0.854 (0.745, 0.963) | 0.608 (0.468, 0.749) | 0.851 (0.743, 0.96) |
| Accuracy | 0.832 (0.744, 0.899) | 0.693 (0.593, 0.781) | 0.822 (0.733, 0.891) |
| Sensitivity/recall | 0.833 | 0.286 | 0.792 |
| Specificity | 0.831 | 0.8 | 0.831 |
| PPV/precision | 0.606 | 0.273 | 0.594 |
| NPV | 0.941 | 0.81 | 0.928 |
| NRI (categorical) | Ref | NA | −0.01 (−0.1, 0.07) |
| NRI (continuous) | Ref | NA | 0.21 (−0.15, 0.57) |
| IDI | Ref | NA | 0.02 (0, 0.06) |
| External validation sets | |||
| TN/FP/FN/TP | 124/41/7/42 | 140/25/30/19 | 131/34/10/39 |
| AUC | 0.885 (0.839, 0.932) | 0.709 (0.628, 0.79) | 0.881 (0.833, 0.928) |
| Accuracy | 0.776 (0.714, 0.83) | 0.743 (0.679, 0.8) | 0.794 (0.734, 0.846) |
| Sensitivity/recall | 0.857 | 0.388 | 0.796 |
| Specificity | 0.752 | 0.848 | 0.794 |
| PPV/precision | 0.506 | 0.432 | 0.534 |
| NPV | 0.947 | 0.824 | 0.929 |
| NRI (categorical) | Ref | NA | 0.01 (−0.08, 0.11) |
| NRI (continuous) | Ref | NA | 0.09 (−0.37, 0.19) |
| IDI (95% CI) | Ref | NA | 0 (−0.03, 0.02) |
P < 0.05. Ref, Reference; Na, Not applicable.
Figure 6Multiple types of radiomics features associated with brain invasiveness in the combined model. (A) Variable importance for classification of event in combined model. (B) Radiomics feature-based principal component analysis (PCA) of tumor invasion. PCA shows that PC10 and PC7 are almost able to distinguish the invasive and noninvasive groups of meningiomas and the multivariate variation of different radiomics features of PC10 and PC7. A total of six features including gray-level co-occurrence matrix (GLCM) and gray-level dependence matrix (GLDM) were subjected to PCA, and those features with variable loading for PC7 ≥0.7 or PC10 ≥0.5 were shown as major contributors. Box plots show the overall distribution of PC10 and PC7 scores within tumor invasion (Wilcoxon rank-sum test). PEV, peritumoral edema volume; ****p < 0.0001.