| Literature DB >> 34503566 |
Katherine E L Worsley-Tonks1, Stanley D Gehrt2,3, Chris Anchor4, Luis E Escobar5, Meggan E Craft6,7.
Abstract
BACKGROUND: Urbanization can have profound effects on ecological interactions. For host-pathogen interactions, differences have been detected between urban and non-urban landscapes. However, host-pathogen interactions may also differ within highly heterogeneous, urbanized landscapes.Entities:
Keywords: Age; Home range; Pathogen; Urban; Vector; Wildlife
Mesh:
Year: 2021 PMID: 34503566 PMCID: PMC8427890 DOI: 10.1186/s13071-021-04958-1
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Fig. 1Map of the Chicago metropolitan area. Grey land represents built-up/developed land and roads (i.e., impervious surfaces from the 2011 National Land Cover Database). Red circles are coyote capture locations (n = 315). Zones 1–4 delineated by black circular lines were generated to explore the relationship between urbanization and the onset and duration of the heartworm transmission season. The heartworm transmission season was estimated by collecting daily temperature data from each zone (see Additional file 1: Figure S1)
Description of statistical approaches used
| Analytical approach | Outcome variable | Fixed effects | Random effect(s) | |
|---|---|---|---|---|
| Linear regression model | 192 | Duration of the heartworm transmission season (months) | Year (2000–2015) Urban zone (1–4) Latitude | NA |
| Binomial generalized linear mixed model | 315a | Infection (yes/no) | Year (2001–2016; no heartworm data were collected in 2006 and 2007) Age class (pup (6–12 months), juvenile, adult) Sex Urban zone (1–4) Proportion of adults tested each year (as an offset) | Site Animal ID |
| Binomial generalized linear mixed modelb | 146 | Infection (yes/no) | Year Age class Resident status (resident vs. transient)c Proportion low developed urban land in home range Proportion medium developed urban land in home range Proportion mosquito habitat in home range Proportion of adults tested each year (as an offset) Age class * proportion low developed Age class * proportion medium developed Age class * proportion mosquito habitat | Site |
aSixteen of the coyotes were captured more than once
bFour models were run using this model structure and composition: (1) for residents and transients using MCP; (2) for residents only using MCP; (3) for residents and transients using a-LoCoH; and (4) for residents only using a-LoCoH
cVariable was included only when both resident and transient coyotes were analyzed
Model averaging results from the linear regression model of the duration of the heartworm transmission season (n = 192)
| Predictors | Estimate | SE | Pr(> | | 95% CI | |
|---|---|---|---|---|---|
| (Intercept) | 3.79 | 0.08 | 48.79 | < 0.001 | 3.63 to 3.93 |
| Urban zone 2 | −0.1 | 0.11 | 0.9 | 0.37 | −0.31 to 0.12 |
| Urban zone 3 | −0.41 | 0.11 | 3.74 | < 0.001 | −0.63 to −0.2 |
| Urban zone 4 | −0.41 | 0.11 | 3.74 | < 0.001 | −0.63 to −0.2 |
| Latitude | −0.04 | 0.04 | 0.94 | 0.35 | −0.12 to 0.04 |
| Year | 0.03 | 0.04 | 0.84 | 0.4 | −0.04 to 0.11 |
Predictors were obtained from the top-ranking models (ΔAICc < 2; Additional file 1: Table S2)
For urban zone, zone 1 is the reference level. Significant terms are those for which 95% confidence intervals [CI] do not overlap with 1 and P < 0.05.
Fig. 2Duration of the heartworm transmission season (in months) for each urban zone. Zone 1 is closest to the core of Chicago, and zone 4 is furthest away (Fig. 1, Additional file 1: Figure S1). Whiskers are 95% confidence intervals
Fig. 3Relationship between heartworm prevalence and a year and b age class. Whiskers are 95% confidence intervals. In panel a, the line denotes the mean infection risk by year based on a quadratic model. The shaded area denotes the 95% confidence interval, and numbers are sample sizes. No heartworm data were collected in 2006 and 2007.
Relationship between heartworm infection and coyote age class and year (n = 315)
| Predictors | Estimate | SE | Pr(> | | OR | 95% CI | |
|---|---|---|---|---|---|---|
| (Intercept) | −0.52 | 0.56 | −0.93 | 0.35 | 0.6 | (0.2–1.79) |
| Age class (subadult) | −1.005 | 0.35 | −2.87 | 0.004 | 0.37 | (0.18–0.73) |
| Age class (pup) | −1.74 | 0.41 | −4.2 | < 0.001 | 0.18 | (0.08–0.4) |
| Year | −2.14 | 1.12 | −1.9 | 0.06 | 0.12 | (0.01–1.07) |
| Year (quadratic) | 1.44 | 0.52 | 2.75 | 0.006 | 4.21 | (1.5–11.9) |
Predictors were obtained from the best fit GLMM (Additional file 1: Table S3)
For age class, adult is the reference level. Significant terms are those for which 95% confidence intervals [CI] do not overlap with 1 and P < 0.05. SE is the standard error, Pr(> |z|) the P-value associated with the z statistic, and OR the odds ratio
Model averaging results from binomial generalized linear mixed models of heartworm infection risk in coyotes (n = 146)
| Model | Predictor | Estimate | SE | Pr(> | | Mean OR | 95% CI | |
|---|---|---|---|---|---|---|---|
| Resident and transient coyotes ( | (Intercept) | −0.59 | 0.45 | 1.33 | 0.18 | 0.55 | (0.23–1.33) |
| Age class (subadult) | −0.75 | 0.46 | 1.64 | 0.1 | 0.47 | (0.19–1.16) | |
| Age class (pup) | −2.37 | 1.02 | 2.33 | 0.02 | 0.09 | (0.01–0.69) | |
| Prop. low developed in home range | −0.22 | 0.27 | 0.82 | 0.41 | 0.8 | (0.48–1.36) | |
| Prop. medium developed in home range | −0.63 | 0.33 | 1.9 | 0.06 | 0.53 | (0.28–1.02) | |
| Prop. mosquito habitat in home range | 0.33 | 0.23 | 1.46 | 0.15 | 1.4 | (0.89–2.19) | |
| Year | −1.74 | 1.53 | 1.14 | 0.26 | 0.18 | (0.01–3.54) | |
| Year (quadratic) | 0.75 | 0.65 | 1.15 | 0.25 | 2.12 | (0.59–7.64) | |
| Age class (subadult) * proportion medium developed | 1.48 | 0.48 | 3.06 | 0.002 | 4.39 | (1.7–11.3) | |
| Age class (pup) | −1.26 | 1.33 | 0.95 | 0.34 | 0.28 | (0.02–3.84) | |
| Resident coyotes only ( | (Intercept) | −0.49 | 0.3 | 1.62 | 0.1 | 0.61 | (0.35–1.08) |
| Age class (subadult) | −0.75 | 0.5 | 1.5 | 0.13 | 0.48 | (0.18–1.27) | |
| Age class (pup) | −3.49 | 2.66 | 1.31 | 0.19 | 0.02 | (0.00–4.48) | |
| Proportion medium developed in home range | −0.56 | 0.34 | 1.64 | 0.1 | 0.57 | (0.29–1.12) | |
| Proportion mosquito habitat in home range | 0.28 | 0.25 | 1.14 | 0.26 | 1.32 | (0.82–2.14) | |
| Age class (subadult) * proportion medium developed | 1.16 | 0.56 | 2.07 | 0.04 | 3.19 | (1.06–9.53) | |
| Age class (pup) * proportion medium developed | −3.36 | 3.83 | 0.88 | 0.38 | 0.03 | (0.00–62.73) |
Predictors were obtained from the top-ranking models (ΔAICc < 2; Additional file 1: Table S4). Coyote home ranges were estimated by calculating and plotting 95% minimum convex polygons (MCPs). Results using 95% adaptive local convex hulls (a-LoCoH) are summarized in Additional file 1: Table S4 and S5)
SE is the standard error, Pr(> |z|) the P-value associated with the z statistic, and mean OR the mean odds ratio
Fig. 4Relationship between infection risk and the proportion of medium developed urban land in coyote home ranges by age class. Panel a includes both resident and transient coyotes (n = 146), and panel b resident coyotes only (n = 107). Lines are mean estimates of infection risk (i.e., probability of infection) by proportion of medium developed urban land in coyote home ranges. The shaded bands are 95% confidence intervals. Coyote home ranges were estimated using 95% minimum convex polygons (95% MCPs). For results using a-LoCoH, see Additional file 1: Figure S2