Literature DB >> 34494176

Amplified plasmonic and microfluidic setup for DNA monitoring.

J Rafaela L Guerreiro1, Andrey Ipatov2, Joana Carvalho2, Anna Toldrà3, Marta Prado2.   

Abstract

Plasmonic nanosensors for label-free detection of DNA require excellent sensing resolution, which is crucial when monitoring short DNA sequences, as these induce tiny peak shifts, compared to large biomolecules. We report a versatile and simple strategy for plasmonic sensor signal enhancement by assembling multiple (four) plasmonic sensors in series. This approach provided a fourfold signal enhancement, increased signal-to-noise ratio, and improved sensitivity for DNA detection. The response of multiple sensors based on AuNSpheres was also compared with  AuNRods, the latter showing better sensing resolution. The amplification system based on AuNR was integrated into  a microfluidic sequential injection platform and applied to the monitoring of DNA, specifically from environmental invasive species-zebra mussels. DNA from zebra mussels was log concentration-dependent from 1 to 1 × 106 pM, reaching a detection limit of 2.0 pM. In situ tests were also successfully applied to real samples, within less than 45 min, using DNA extracted from zebra mussel meat. The plasmonic nanosensors' signal can be used as a binary output (yes/no) to assess the presence of those invasive species. Even though these genosensors were applied to the monitoring of DNA in environmental samples, they potentially offer advantage in a wide range of fields, such as disease diagnostics.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature.

Entities:  

Keywords:  Label-free amplification; Localized surface plasmon resonance; Microfluidic cell; Oligonucleotides detection; Plasmonic sensors; Sequential injection system; Signal amplification

Mesh:

Substances:

Year:  2021        PMID: 34494176     DOI: 10.1007/s00604-021-04983-y

Source DB:  PubMed          Journal:  Mikrochim Acta        ISSN: 0026-3672            Impact factor:   5.833


  18 in total

1.  A "Tips and Tricks" Practical Guide to the Synthesis of Gold Nanorods.

Authors:  Leonardo Scarabelli; Ana Sánchez-Iglesias; Jorge Pérez-Juste; Luis M Liz-Marzán
Journal:  J Phys Chem Lett       Date:  2015-11-05       Impact factor: 6.475

2.  Optical properties of star-shaped gold nanoparticles.

Authors:  Colleen L Nehl; Hongwei Liao; Jason H Hafner
Journal:  Nano Lett       Date:  2006-04       Impact factor: 11.189

Review 3.  Localized surface plasmon resonance spectroscopy and sensing.

Authors:  Katherine A Willets; Richard P Van Duyne
Journal:  Annu Rev Phys Chem       Date:  2007       Impact factor: 12.703

4.  Shape control in gold nanoparticle synthesis.

Authors:  Marek Grzelczak; Jorge Pérez-Juste; Paul Mulvaney; Luis M Liz-Marzán
Journal:  Chem Soc Rev       Date:  2008-07-07       Impact factor: 54.564

5.  Shape- and size-dependent refractive index sensitivity of gold nanoparticles.

Authors:  Huanjun Chen; Xiaoshan Kou; Zhi Yang; Weihai Ni; Jianfang Wang
Journal:  Langmuir       Date:  2008-04-25       Impact factor: 3.882

6.  Gold nanorods and their plasmonic properties.

Authors:  Huanjun Chen; Lei Shao; Qian Li; Jianfang Wang
Journal:  Chem Soc Rev       Date:  2013-04-07       Impact factor: 54.564

7.  Chemisorption assembly of Au nanorods on mercaptosilanized glass substrate for label-free nanoplasmon biochip.

Authors:  Yanyan Wang; Liang Tang
Journal:  Anal Chim Acta       Date:  2013-08-20       Impact factor: 6.558

8.  Multifunctional biosensor based on localized surface plasmon resonance for monitoring small molecule-protein interaction.

Authors:  Joana Rafaela Lara Guerreiro; Maj Frederiksen; Vladimir E Bochenkov; Victor De Freitas; Maria Goreti Ferreira Sales; Duncan Steward Sutherland
Journal:  ACS Nano       Date:  2014-08-26       Impact factor: 15.881

Review 9.  Nanoscopic optical rulers beyond the FRET distance limit: fundamentals and applications.

Authors:  Paresh Chandra Ray; Zhen Fan; Rebecca A Crouch; Sudarson Sekhar Sinha; Avijit Pramanik
Journal:  Chem Soc Rev       Date:  2014-09-07       Impact factor: 54.564

10.  Faster monitoring of the invasive alien species (IAS) Dreissena polymorpha in river basins through isothermal amplification.

Authors:  Joana Carvalho; Alejandro Garrido-Maestu; Sarah Azinheiro; Pablo Fuciños; Jorge Barros-Velázquez; Ramón J De Miguel; Verónica Gros; Marta Prado
Journal:  Sci Rep       Date:  2021-05-13       Impact factor: 4.379

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