Literature DB >> 34493869

Sex differences in genetic architecture in the UK Biobank.

Elena Bernabeu1, Oriol Canela-Xandri2, Konrad Rawlik1, Andrea Talenti1, James Prendergast1, Albert Tenesa3,4.   

Abstract

Males and females present differences in complex traits and in the risk of a wide array of diseases. Genotype by sex (GxS) interactions are thought to account for some of these differences. However, the extent and basis of GxS are poorly understood. In the present study, we provide insights into both the scope and the mechanism of GxS across the genome of about 450,000 individuals of European ancestry and 530 complex traits in the UK Biobank. We found small yet widespread differences in genetic architecture across traits. We also found that, in some cases, sex-agnostic analyses may be missing trait-associated loci and looked into possible improvements in the prediction of high-level phenotypes. Finally, we studied the potential functional role of the differences observed through sex-biased gene expression and gene-level analyses. Our results suggest the need to consider sex-aware analyses for future studies to shed light onto possible sex-specific molecular mechanisms.
© 2021. The Author(s), under exclusive licence to Springer Nature America, Inc.

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Year:  2021        PMID: 34493869     DOI: 10.1038/s41588-021-00912-0

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  45 in total

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Authors:  Ekaterina A Khramtsova; Lea K Davis; Barbara E Stranger
Journal:  Nat Rev Genet       Date:  2019-03       Impact factor: 53.242

Review 2.  Sex differences in disease genetics: evidence, evolution, and detection.

Authors:  William P Gilks; Jessica K Abbott; Edward H Morrow
Journal:  Trends Genet       Date:  2014-09-16       Impact factor: 11.639

3.  The sex-specific genetic architecture of quantitative traits in humans.

Authors:  Lauren A Weiss; Lin Pan; Mark Abney; Carole Ober
Journal:  Nat Genet       Date:  2006-01-22       Impact factor: 38.330

Review 4.  Sex-specific genetic architecture of human disease.

Authors:  Carole Ober; Dagan A Loisel; Yoav Gilad
Journal:  Nat Rev Genet       Date:  2008-12       Impact factor: 53.242

5.  Evidence for sex-specific genetic architectures across a spectrum of human complex traits.

Authors:  Konrad Rawlik; Oriol Canela-Xandri; Albert Tenesa
Journal:  Genome Biol       Date:  2016-07-29       Impact factor: 13.583

6.  Large Scale Gene Expression Meta-Analysis Reveals Tissue-Specific, Sex-Biased Gene Expression in Humans.

Authors:  Benjamin T Mayne; Tina Bianco-Miotto; Sam Buckberry; James Breen; Vicki Clifton; Cheryl Shoubridge; Claire T Roberts
Journal:  Front Genet       Date:  2016-10-13       Impact factor: 4.599

7.  The landscape of sex-differential transcriptome and its consequent selection in human adults.

Authors:  Moran Gershoni; Shmuel Pietrokovski
Journal:  BMC Biol       Date:  2017-02-07       Impact factor: 7.431

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Journal:  Nat Genet       Date:  2012-12-23       Impact factor: 38.330

9.  Widespread sex differences in gene expression and splicing in the adult human brain.

Authors:  Daniah Trabzuni; Adaikalavan Ramasamy; Sabaena Imran; Robert Walker; Colin Smith; Michael E Weale; John Hardy; Mina Ryten
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

10.  Sex-based differences in myocardial gene expression in recently deceased organ donors with no prior cardiovascular disease.

Authors:  Kolsoum InanlooRahatloo; Grace Liang; Davis Vo; Antje Ebert; Ivy Nguyen; Patricia K Nguyen
Journal:  PLoS One       Date:  2017-08-29       Impact factor: 3.240

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2.  Whole-genome sequencing reveals host factors underlying critical COVID-19.

Authors:  Athanasios Kousathanas; Erola Pairo-Castineira; Konrad Rawlik; Alex Stuckey; Christopher A Odhams; Susan Walker; Clark D Russell; Tomas Malinauskas; Yang Wu; Jonathan Millar; Xia Shen; Katherine S Elliott; Fiona Griffiths; Wilna Oosthuyzen; Kirstie Morrice; Sean Keating; Bo Wang; Daniel Rhodes; Lucija Klaric; Marie Zechner; Nick Parkinson; Afshan Siddiq; Peter Goddard; Sally Donovan; David Maslove; Alistair Nichol; Malcolm G Semple; Tala Zainy; Fiona Maleady-Crowe; Linda Todd; Shahla Salehi; Julian Knight; Greg Elgar; Georgia Chan; Prabhu Arumugam; Christine Patch; Augusto Rendon; David Bentley; Clare Kingsley; Jack A Kosmicki; Julie E Horowitz; Aris Baras; Goncalo R Abecasis; Manuel A R Ferreira; Anne Justice; Tooraj Mirshahi; Matthew Oetjens; Daniel J Rader; Marylyn D Ritchie; Anurag Verma; Tom A Fowler; Manu Shankar-Hari; Charlotte Summers; Charles Hinds; Peter Horby; Lowell Ling; Danny McAuley; Hugh Montgomery; Peter J M Openshaw; Paul Elliott; Timothy Walsh; Albert Tenesa; Angie Fawkes; Lee Murphy; Kathy Rowan; Chris P Ponting; Veronique Vitart; James F Wilson; Jian Yang; Andrew D Bretherick; Richard H Scott; Sara Clohisey Hendry; Loukas Moutsianas; Andy Law; Mark J Caulfield; J Kenneth Baillie
Journal:  Nature       Date:  2022-03-07       Impact factor: 69.504

3.  A combined genome-wide association and molecular study of age-related hearing loss in H. sapiens.

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4.  Polygenic signals of sex differences in selection in humans from the UK Biobank.

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Journal:  PLoS Biol       Date:  2022-09-06       Impact factor: 9.593

5.  Comparison of Methods Utilizing Sex-Specific PRSs Derived From GWAS Summary Statistics.

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Review 6.  Considerations and challenges for sex-aware drug repurposing.

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  6 in total

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