| Literature DB >> 34490493 |
Zhicong Li1, Lena Kaiser1, Adrien Holzgreve1, Viktoria C Ruf2, Bogdana Suchorska3,4, Vera Wenter1, Stefanie Quach3, Jochen Herms2, Peter Bartenstein1,5, Jörg-Christian Tonn3,5, Marcus Unterrainer6, Nathalie L Albert7,8.
Abstract
PURPOSE: To evaluate radiomic features extracted from standard static images (20-40 min p.i.), early summation images (5-15 min p.i.), and dynamic [18F]FET PET images for the prediction of TERTp-mutation status in patients with IDH-wildtype high-grade glioma.Entities:
Keywords: Glioma; Radiomics; TERTp-mutation; [18F]FET PET
Mesh:
Substances:
Year: 2021 PMID: 34490493 PMCID: PMC8566644 DOI: 10.1007/s00259-021-05526-6
Source DB: PubMed Journal: Eur J Nucl Med Mol Imaging ISSN: 1619-7070 Impact factor: 9.236
Fig. 1The workflow of process. TBR tumour-to-background ratio, TTP time-to-peak, RFE recursive feature elimination, LR logistic regression, AUC area under the receiver operating characteristic curve, PPV positive predictive value, NPV negative predictive value
Clinical characteristics of the patients
| Training cohort ( | Testing cohort ( | ||||
|---|---|---|---|---|---|
| TERTp-mutation | TERTp-wildtype | TERTp-mutation | TERTp-wildtype | ||
| Characteristic | ( | ( | ( | ( | 0.8958 |
| Age, years | 58.1 ± 12.3 | 59.2 ± 11.2 | 0.3699 | ||
| Sex | |||||
| Female | 45 (40.2%) | 17 (54.8%) | 0.1449 | ||
| Male | 67 (59.8%) | 14 (45.2%) | |||
| WHO grade | |||||
| III | 39 (34.8%) | 14 (29.8%) | 0.5389 | ||
| IV | 73 (65.2%) | 33 (70.2%) | |||
Data are means ± standard deviations or numbers of patients with percentages in parentheses. P value was derived from the univariate association analyses between each clinical parameter. Calculated by using the independent sample t test for continuous variables and the χ2 test for categoric variables
Fig. 2The feature selection process of the RFE method. Each iteration removes a feature that is considered least important and corresponds to a 10-fold cross-validation. After 10-fold cross-validation, the AUC of the model in the training cohort was used to determine the optimal number of features. The minimum AUC of feature number was selected. a TBR5–15 model, b TBR20–40, and c TTP model; 9, 14, and 10 features were selected respectively. RFE recursive feature elimination, AUC area under the receiver operating characteristic curve
Coefficients of selected features in the TTP model
| Features | Coefficients |
|---|---|
| SmallDependenceLowGreyLevelEmphasis | 1.508 |
| Energy | 1.404 |
| SmallDependenceHighGreyLevelEmphasis | − 1.283 |
| GreyLevelNonUniformityNormalized | − 1.235 |
| LeastAxisLength | − 1.219 |
| Busyness | − 0.916 |
| ShortRunHighGreyLevelEmphasis | − 0.699 |
| Maximum2DDiameterColumn | 0.654 |
| LowGreyLevelZoneEmphasis | − 0.626 |
| LargeDependenceHighGreyLevelEmphasis | 0.606 |
Intercept is 0.599 in the TTP model. Details of features were shown in Supplementary Information
Fig. 3a TBR5–15 model reached an AUC of 0.80 in the training cohort, and b an AUC of 0.61 in the testing cohort. c TTP model reached an AUC of 0.90 in the training cohort, and d an AUC of 0.82 in the testing cohort. AUC area under the receiver operating characteristic curve
Performance of each model
| TBR5–15 | TBR20–40 | TTP | ||||
|---|---|---|---|---|---|---|
| Training cohort | Testing cohort | Training cohort | Testing cohort | Training cohort | Testing cohort | |
| AUC | 0.80 | 0.61 | 0.90 | 0.49 | 0.90 | 0.82 |
| AUC 95%CI | (0.71–0.89) | (0.42–0.80) | (0.85–0.95) | (0.30–0.69) | (0.84–0.95) | (0.71–0.92) |
| Accuracy | 0.75.0% | 66.0% | 83.0% | 66.0% | 78.6% | 83.0% |
| Sensitivity | 73.3% | 73.7% | 81.1% | 73.7% | 77.8% | 92.1% |
| Specificity | 81.8% | 33.3% | 90.9% | 33.3% | 81.8% | 44.4% |
| PPV | 94.3% | 82.4% | 97.3% | 82.4% | 94.6% | 87.5% |
| NPV | 42.9% | 23.1% | 54.1% | 23.1% | 47.4% | 57.1% |
CI confidence interval