| Literature DB >> 34490249 |
Lei Feng1, Si Chen1,2, Huatuo Dai3,4, Rajkumar Dorajoo5, Jianjun Liu5,6, Jinfeng Kong1, Xianyong Yin7, Yunqing Ren3,4.
Abstract
BACKGROUND: Central serous chorioretinopathy (CSC) is a severe and heterogeneous chorioretinal disorder. Shared clinical manifestations between CSC and age-related macular degeneration (AMD) and the confirmation of CFH as genetic risk locus for both CSC and AMD suggest possible common pathophysiologic mechanisms between two diseases.Entities:
Keywords: age-related macular degeneration; association; central serous chorioretinopathy; gene; pleiotropic effect; risk loci
Year: 2021 PMID: 34490249 PMCID: PMC8417822 DOI: 10.3389/fcell.2021.696885
Source DB: PubMed Journal: Front Cell Dev Biol ISSN: 2296-634X
FIGURE 1Examples of fundus fluorescein angiography (FFA), indocyanine green (ICG) angiography, and spectral-domain optical coherence tomography (SD-OCT) in individuals with acute CSC and controls. (A) The left eye of an individual with a typical smokestack leakage point on FFA. (B) The right eye of an individual with a typical inkblot-like leakage point on FFA. (C) The ICGA image of the same individual as in panel (B), showing choroidal vascular dilatation. (D) An obvious central subretinal fluid (SRF) between retinal neurepithelium layer and retinal pigment epithelium layer on OCT. (E) The FFA image of one of the controls showing no leakage point. (F) The OCT image of one of the controls showing no subretinal fluid. (G) The normal ICGA image of one of the controls.
Association results for 12 AMD-known SNPs with nominal significance in acute CSC in Han Chinese population.
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| rs1410996 | 1 | 196,696,933 |
| A/G | 0.52 | 0.41 | 0.09 | 2.37E−05 | 1.47 | 0.37 ( |
| rs1329428 | 1 | 196,702,810 |
| T/C | 0.52 | 0.43 | 0.09 | 3.32E−04 | 1.40 | 0.36 ( |
| rs2043085 | 15 | 58,680,954 |
| A/G | 0.55 | 0.46 | 0.10 | 1.91E−04 | 1.44 | 1.15 ( |
| rs4698775 | 4 | 110,590,479 |
| G/T | 0.29 | 0.21 | 0.10 | 2.20E−04 | 1.45 | 1.14 ( |
| rs429358 | 19 | 45,411,941 |
| C/T | 0.03 | 0.06 | 0.24 | 8.39E−03 | 0.53 | 0.70 ( |
| rs10507047 | 12 | 95,604,290 |
| C/T | 0.34 | 0.29 | 0.10 | 1.85E−02 | 1.26 | 0.87 ( |
| rs1142 | 7 | 104,756,326 | T/C | 0.33 | 0.29 | 0.10 | 2.30E−02 | 1.26 | 1.11 ( | |
| rs4420638 | 19 | 45,422,946 |
| G/A | 0.08 | 0.11 | 0.16 | 2.56E−02 | 0.70 | 0.77 ( |
| rs1713985 | 4 | 57,786,450 | G/T | 0.23 | 0.27 | 0.11 | 2.86E−02 | 0.79 | 1.30 ( | |
| rs10781182 | 9 | 76,617,720 |
| G/T | 0.29 | 0.24 | 0.11 | 4.11E−02 | 1.26 | 0.90 ( |
| rs3812111 | 6 | 116,443,735 |
| A/T | 0.25 | 0.19 | 0.11 | 4.12E−02 | 1.24 | 0.91 ( |
| rs2740488 | 9 | 107,661,742 |
| C/A | 0.26 | 0.22 | 0.12 | 4.98E−02 | 1.26 | 0.90 ( |
Association results for the three SNPs under three different models.
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| 1 | rs1410996 | 196,696,933 | A/G | ADD | 2.37E−05 | 1.47 (1.23–1.75) |
| DOM | 3.22E−02 | 1.36 (1.03–1.79) | ||||
| REC | 7.98E−07 | 2.19 (1.60–3.00) | ||||
| 4 | rs4698775 | 110,590,479 | G/T | ADD | 2.20E−04 | 1.45 (1.19–1.76) |
| DOM | 3.23E−02 | 1.33 (1.03–1.72) | ||||
| REC | 2.91E−06 | 3.08 (1.92–4.93) | ||||
| 15 | rs2043085 | 58,680,954 | A/G | ADD | 1.91E−04 | 1.44 (1.18–1.75) |
| DOM | 4.62E−02 | 1.37 (1.00–1.87) | ||||
| REC | 5.90E−05 | 1.87 (1.37–2.56) |
FIGURE 2Odds ratios (OR) by the quartile of polygenic risk score estimated based on the top three SNPs. The circle denotes the estimated value of odds ratio. The error bar represents the 95% confidence interval for the odds ratio estimation. The circle is colored in pink (p < 0.05) and blue (p > 0.05) according to its corresponding respective p-value.
Stratified association analysis of three SNPs with shape of fluid leakage on FFA.
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| 15 | rs2043085 | 58,680,954 | G/A | 0.62 (0.44–0.87) | 3.83E−03 | Shape of fluid leakage |
| 4 | rs4698775 | 110,590,479 | G/T | 1.39 (1.04–1.87) | 2.34E−02 | Shape of fluid leakage |
| 1 | rs1410996 | 196,696,933 | G/A | 0.77 (0.57–1.03) | 7.78E−02 | Shape of fluid leakage |
FIGURE 3Individuals with classic smoke stack shape of fluid leakage show higher polygenic risk score (PRS) for the top three SNPs.
Association of rs1410996 with OCT manifestation.
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| 1 | rs1410996 | 196,696,933 | G/A | −0.149 | 0.065 | 2.26E−02 | Central subfield thickness |
| 1 | rs1410996 | 196,696,933 | G/A | −0.140 | 0.067 | 3.78E−02 | Horizontal dimension of SRF |
| 1 | rs1410996 | 196,696,933 | G/A | −0.182 | 0.068 | 7.84E−03 | Vertical dimension of SRF |
FIGURE 4The comparison of odds ratios between CSC and AMD. The four significant SNPs are labeled in red, other eight SNPs with achieved nominal association significance (p < 0.05) are labeled in blue, and the remaining ones are in black.
FIGURE 5The five SNPs with consistent effectsbetween CSC and AMD show enrichment with Gene Ontology (A) Biological processes and (B) Cellular compartment terms (mainly related in lipid metabolism, B-H adj p < 0.05).