Literature DB >> 34480925

Computational biology: Turing's lessons in simplicity.

Jeremy B A Green1.   

Abstract

Biophysical modeling of development started with Alan Turing. His two-morphogen reaction-diffusion model was a radical but powerful simplification. Despite its apparent limitations, the model captured real developmental processes that only recently have been validated at the molecular level in many systems. The precision and robustness of reaction-diffusion patterning, despite boundary condition-dependence, remain active areas of investigation in developmental biology.
Copyright © 2021 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2021        PMID: 34480925      PMCID: PMC8516674          DOI: 10.1016/j.bpj.2021.08.041

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   3.699


  8 in total

1.  WNT and DKK determine hair follicle spacing through a reaction-diffusion mechanism.

Authors:  Stefanie Sick; Stefan Reinker; Jens Timmer; Thomas Schlake
Journal:  Science       Date:  2006-11-02       Impact factor: 47.728

Review 2.  Positional information and reaction-diffusion: two big ideas in developmental biology combine.

Authors:  Jeremy B A Green; James Sharpe
Journal:  Development       Date:  2015-04-01       Impact factor: 6.868

3.  Hox genes regulate digit patterning by controlling the wavelength of a Turing-type mechanism.

Authors:  Rushikesh Sheth; Luciano Marcon; M Félix Bastida; Marisa Junco; Laura Quintana; Randall Dahn; Marie Kmita; James Sharpe; Maria A Ros
Journal:  Science       Date:  2012-12-14       Impact factor: 47.728

4.  Drosophila development: making stripes inelegantly.

Authors:  M Akam
Journal:  Nature       Date:  1989-09-28       Impact factor: 49.962

5.  A theory of biological pattern formation.

Authors:  A Gierer; H Meinhardt
Journal:  Kybernetik       Date:  1972-12

6.  Differential diffusivity of Nodal and Lefty underlies a reaction-diffusion patterning system.

Authors:  Patrick Müller; Katherine W Rogers; Ben M Jordan; Joon S Lee; Drew Robson; Sharad Ramanathan; Alexander F Schier
Journal:  Science       Date:  2012-04-12       Impact factor: 47.728

7.  Periodic stripe formation by a Turing mechanism operating at growth zones in the mammalian palate.

Authors:  Andrew D Economou; Atsushi Ohazama; Thantrira Porntaveetus; Paul T Sharpe; Shigeru Kondo; M Albert Basson; Amel Gritli-Linde; Martyn T Cobourne; Jeremy B A Green
Journal:  Nat Genet       Date:  2012-02-19       Impact factor: 38.330

8.  Perturbation analysis of a multi-morphogen Turing reaction-diffusion stripe patterning system reveals key regulatory interactions.

Authors:  Andrew D Economou; Nicholas A M Monk; Jeremy B A Green
Journal:  Development       Date:  2020-10-29       Impact factor: 6.862

  8 in total
  2 in total

Review 1.  Patterning, From Conifers to Consciousness: Turing's Theory and Order From Fluctuations.

Authors:  Thurston C Lacalli
Journal:  Front Cell Dev Biol       Date:  2022-05-03

2.  A Library of Aspergillus niger Chassis Strains for Morphology Engineering Connects Strain Fitness and Filamentous Growth With Submerged Macromorphology.

Authors:  Timothy C Cairns; Xiaomei Zheng; Claudia Feurstein; Ping Zheng; Jibin Sun; Vera Meyer
Journal:  Front Bioeng Biotechnol       Date:  2022-01-17
  2 in total

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