Literature DB >> 34480236

Heterologous expression of a cryptic gene cluster from Marinomonas fungiae affords a novel tricyclic peptide marinomonasin.

Issara Kaweewan1, Hiroyuki Nakagawa2,3, Shinya Kodani4,5,6.   

Abstract

The ω-ester-containing peptides (OEPs) are a group of ribosomally synthesized and post-translationally modified peptides (RiPPs). The biosynthetic gene clusters of ω-ester-containing peptides commonly include ATP-grasp ligase coding genes and are distributed over the genomes of a wide variety of bacteria. A new biosynthetic gene cluster of ω-ester-containing peptides was found in the genome sequence of the marine proteobacterium Marinomonas fungiae. Heterologous production of a new tricyclic peptide named marinomonasin was accomplished using the biosynthetic gene cluster in Escherichia coli expression host strain BL21(DE3). By ESI-MS and NMR experiments, the structure of marinomonasin was determined to be a tricyclic peptide 18 amino acids in length with one ester and two isopeptide bonds in the molecule. The bridging patterns of the three intramolecular bonds were determined by the interpretation of HMBC and NOESY data. The bridging pattern of marinomonasin was unprecedented in the ω-ester-containing peptide group. The results indicated that the ATP-grasp ligase for the production of marinomonasin was a novel enzyme possessing bifunctional activity to form one ester and two isopeptide bonds. KEY POINTS: • New tricyclic peptide marinomonasin was heterologously produced in Escherichia coli. • Marinomonasin contained one ester and two isopeptide bonds in the molecule. • The bridging pattern of intramolecular bonds was novel.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  ATP-grasp ligase; Biosynthesis; Heterologous expression; ω-Ester-containing peptide

Mesh:

Substances:

Year:  2021        PMID: 34480236     DOI: 10.1007/s00253-021-11545-y

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  23 in total

1.  Phylogenomic Analysis of the Microviridin Biosynthetic Pathway Coupled with Targeted Chemo-Enzymatic Synthesis Yields Potent Protease Inhibitors.

Authors:  Muhammad N Ahmed; Emmanuel Reyna-González; Bianca Schmid; Vincent Wiebach; Roderich D Süssmuth; Elke Dittmann; David P Fewer
Journal:  ACS Chem Biol       Date:  2017-04-26       Impact factor: 5.100

Review 2.  Expanded genetic code for the engineering of ribosomally synthetized and post-translationally modified peptide natural products (RiPPs).

Authors:  Nediljko Budisa
Journal:  Curr Opin Biotechnol       Date:  2013-03-25       Impact factor: 9.740

3.  Heterologous production of a new lasso peptide brevunsin in Sphingomonas subterranea.

Authors:  Shinya Kodani; Hikaru Hemmi; Yuto Miyake; Issara Kaweewan; Hiroyuki Nakagawa
Journal:  J Ind Microbiol Biotechnol       Date:  2018-09-06       Impact factor: 3.346

4.  Functional analysis of environmental DNA-derived microviridins provides new insights into the diversity of the tricyclic peptide family.

Authors:  Douglas Gatte-Picchi; Annika Weiz; Keishi Ishida; Christian Hertweck; Elke Dittmann
Journal:  Appl Environ Microbiol       Date:  2013-12-13       Impact factor: 4.792

5.  Enzymatic Cross-Linking of Side Chains Generates a Modified Peptide with Four Hairpin-like Bicyclic Repeats.

Authors:  Hyunbin Lee; Youngseon Park; Seokhee Kim
Journal:  Biochemistry       Date:  2017-09-06       Impact factor: 3.162

6.  Introduction of Bifunctionality into the Multidomain Architecture of the ω-Ester-Containing Peptide Plesiocin.

Authors:  Chanwoo Lee; Hyunbin Lee; Jung-Un Park; Seokhee Kim
Journal:  Biochemistry       Date:  2019-10-28       Impact factor: 3.162

7.  Unlocking the Spatial Control of Secondary Metabolism Uncovers Hidden Natural Product Diversity in Nostoc punctiforme.

Authors:  Daniel Dehm; Julia Krumbholz; Martin Baunach; Vincent Wiebach; Katrin Hinrichs; Arthur Guljamow; Takeshi Tabuchi; Holger Jenke-Kodama; Roderich D Süssmuth; Elke Dittmann
Journal:  ACS Chem Biol       Date:  2019-05-24       Impact factor: 5.100

8.  Microviridin biosynthesis.

Authors:  Thomas K Hemscheidt
Journal:  Methods Enzymol       Date:  2012       Impact factor: 1.600

9.  Genome Mining Reveals High Topological Diversity of ω-Ester-Containing Peptides and Divergent Evolution of ATP-Grasp Macrocyclases.

Authors:  Hyunbin Lee; Mingyu Choi; Jung-Un Park; Heejin Roh; Seokhee Kim
Journal:  J Am Chem Soc       Date:  2020-01-28       Impact factor: 15.419

10.  Structural basis for precursor protein-directed ribosomal peptide macrocyclization.

Authors:  Kunhua Li; Heather L Condurso; Gengnan Li; Yousong Ding; Steven D Bruner
Journal:  Nat Chem Biol       Date:  2016-09-26       Impact factor: 15.040

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  4 in total

1.  Bioinformatics-Guided Expansion and Discovery of Graspetides.

Authors:  Sangeetha Ramesh; Xiaorui Guo; Adam J DiCaprio; Ashley M De Lio; Lonnie A Harris; Bryce L Kille; Taras V Pogorelov; Douglas A Mitchell
Journal:  ACS Chem Biol       Date:  2021-11-12       Impact factor: 5.100

2.  Biosynthesis and characterization of fuscimiditide, an aspartimidylated graspetide.

Authors:  Hader E Elashal; Joseph D Koos; Wai Ling Cheung-Lee; Brian Choi; Li Cao; Michelle A Richardson; Heather L White; A James Link
Journal:  Nat Chem       Date:  2022-08-18       Impact factor: 24.274

Review 3.  Recent Advances in the Heterologous Expression of Biosynthetic Gene Clusters for Marine Natural Products.

Authors:  Yushan Xu; Xinhua Du; Xionghui Yu; Qian Jiang; Kaiwen Zheng; Jinzhong Xu; Pinmei Wang
Journal:  Mar Drugs       Date:  2022-05-24       Impact factor: 6.085

4.  A scalable platform to discover antimicrobials of ribosomal origin.

Authors:  Richard S Ayikpoe; Chengyou Shi; Alexander J Battiste; Sara M Eslami; Sangeetha Ramesh; Max A Simon; Ian R Bothwell; Hyunji Lee; Andrew J Rice; Hengqian Ren; Qiqi Tian; Lonnie A Harris; Raymond Sarksian; Lingyang Zhu; Autumn M Frerk; Timothy W Precord; Wilfred A van der Donk; Douglas A Mitchell; Huimin Zhao
Journal:  Nat Commun       Date:  2022-10-17       Impact factor: 17.694

  4 in total

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