Literature DB >> 34473088

Structural and biochemical characterization of the novel serpin Iripin-5 from Ixodes ricinus.

Barbora Kascakova1, Jan Kotal2, Larissa Almeida Martins3, Zuzana Berankova2, Helena Langhansova2, Eric Calvo4, Joel A Crossley1, Petra Havlickova1, Filip Dycka1, Tatyana Prudnikova1, Michal Kuty1, Michail Kotsyfakis2, Jindrich Chmelar2, Ivana Kuta Smatanova1.   

Abstract

Iripin-5 is the main Ixodes ricinus salivary serpin, which acts as a modulator of host defence mechanisms by impairing neutrophil migration, suppressing nitric oxide production by macrophages and altering complement functions. Iripin-5 influences host immunity and shows high expression in the salivary glands. Here, the crystal structure of Iripin-5 in the most thermodynamically stable state of serpins is described. In the reactive-centre loop, the main substrate-recognition site of Iripin-5 is likely to be represented by Arg342, which implies the targeting of trypsin-like proteases. Furthermore, a computational structural analysis of selected Iripin-5-protease complexes together with interface analysis revealed the most probable residues of Iripin-5 involved in complex formation.

Entities:  

Keywords:  Iripin-5; Ixodes ricinus; X-ray structure; serine protease inhibitors; serpins; tick saliva

Mesh:

Substances:

Year:  2021        PMID: 34473088      PMCID: PMC8573701          DOI: 10.1107/S2059798321007920

Source DB:  PubMed          Journal:  Acta Crystallogr D Struct Biol        ISSN: 2059-7983            Impact factor:   5.699


  58 in total

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Journal:  Chem Rev       Date:  2002-12       Impact factor: 60.622

2.  Andromeda: a peptide search engine integrated into the MaxQuant environment.

Authors:  Jürgen Cox; Nadin Neuhauser; Annette Michalski; Richard A Scheltema; Jesper V Olsen; Matthias Mann
Journal:  J Proteome Res       Date:  2011-02-22       Impact factor: 4.466

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4.  Prediction of quaternary structure by analysis of hot spot residues in protein-protein interfaces: the case of anthranilate phosphoribosyltransferases.

Authors:  Sandra Schlee; Kristina Straub; Thomas Schwab; Thomas Kinateder; Rainer Merkl; Reinhard Sterner
Journal:  Proteins       Date:  2019-06-10

5.  The crystal structure of PR3, a neutrophil serine proteinase antigen of Wegener's granulomatosis antibodies.

Authors:  M Fujinaga; M M Chernaia; R Halenbeck; K Koths; M N James
Journal:  J Mol Biol       Date:  1996-08-16       Impact factor: 5.469

6.  Hormone binding globulins undergo serpin conformational change in inflammation.

Authors:  P A Pemberton; P E Stein; M B Pepys; J M Potter; R W Carrell
Journal:  Nature       Date:  1988-11-17       Impact factor: 49.962

Review 7.  All For One and One For All on the Tick-Host Battlefield.

Authors:  Jindřich Chmelař; Jan Kotál; Jan Kopecký; Joao H F Pedra; Michail Kotsyfakis
Journal:  Trends Parasitol       Date:  2016-01-30

Review 8.  The role of saliva in tick feeding.

Authors:  Ivo M B Francischetti; Anderson Sa-Nunes; Ben J Mans; Isabel M Santos; Jose M C Ribeiro
Journal:  Front Biosci (Landmark Ed)       Date:  2009-01-01

9.  REFMAC5 for the refinement of macromolecular crystal structures.

Authors:  Garib N Murshudov; Pavol Skubák; Andrey A Lebedev; Navraj S Pannu; Roberto A Steiner; Robert A Nicholls; Martyn D Winn; Fei Long; Alexei A Vagin
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

10.  Iripin-3, a New Salivary Protein Isolated From Ixodes ricinus Ticks, Displays Immunomodulatory and Anti-Hemostatic Properties In Vitro.

Authors:  Adéla Chlastáková; Jan Kotál; Zuzana Beránková; Barbora Kaščáková; Larissa Almeida Martins; Helena Langhansová; Tatyana Prudnikova; Monika Ederová; Ivana Kutá Smatanová; Michail Kotsyfakis; Jindřich Chmelař
Journal:  Front Immunol       Date:  2021-03-01       Impact factor: 7.561

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  1 in total

Review 1.  Serpins in Tick Physiology and Tick-Host Interaction.

Authors:  Muhammad Nadeem Abbas; Adéla Chlastáková; Mohamed Amine Jmel; Evangelia Iliaki-Giannakoudaki; Jindřich Chmelař; Michail Kotsyfakis
Journal:  Front Cell Infect Microbiol       Date:  2022-05-19       Impact factor: 6.073

  1 in total

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