Literature DB >> 34472684

Structural mechanism of TRPV3 channel inhibition by the plant-derived coumarin osthole.

Arthur Neuberger1, Kirill D Nadezhdin1, Eleonora Zakharian2, Alexander I Sobolevsky1.   

Abstract

TRPV3, a representative of the vanilloid subfamily of TRP channels, is predominantly expressed in skin keratinocytes and has been implicated in cutaneous sensation and associated with numerous skin pathologies and cancers. TRPV3 is inhibited by the natural coumarin derivative osthole, an active ingredient of Cnidium monnieri, which has been used in traditional Chinese medicine for the treatment of a variety of human diseases. However, the structural basis of channel inhibition by osthole has remained elusive. Here we present cryo-EM structures of TRPV3 in complex with osthole, revealing two types of osthole binding sites in the transmembrane region of TRPV3 that coincide with the binding sites of agonist 2-APB. Osthole binding converts the channel pore into a previously unidentified conformation with a widely open selectivity filter and closed intracellular gate. Our structures provide insight into competitive inhibition of TRPV3 by osthole and can serve as a template for the design of osthole chemistry-inspired drugs targeting TRPV3-associated diseases.
© 2021 The Authors.

Entities:  

Keywords:  TRP channels; competitive inhibitor; cryo-EM; osthole; single-channel recordings

Mesh:

Substances:

Year:  2021        PMID: 34472684      PMCID: PMC8567229          DOI: 10.15252/embr.202153233

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  60 in total

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Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

2.  HOLE: a program for the analysis of the pore dimensions of ion channel structural models.

Authors:  O S Smart; J G Neduvelil; X Wang; B A Wallace; M S Sansom
Journal:  J Mol Graph       Date:  1996-12

3.  A pivotal role for the activation of TRPV3 channel in itch sensations induced by the natural skin sensitizer carvacrol.

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Journal:  Acta Pharmacol Sin       Date:  2017-11-02       Impact factor: 6.150

4.  TRP channel regulates EGFR signaling in hair morphogenesis and skin barrier formation.

Authors:  Xiping Cheng; Jie Jin; Lily Hu; Dongbiao Shen; Xian-Ping Dong; Mohammad A Samie; Jayne Knoff; Brian Eisinger; Mei-Ling Liu; Susan M Huang; Michael J Caterina; Peter Dempsey; Lowell Evan Michael; Andrzej A Dlugosz; Nancy C Andrews; David E Clapham; Haoxing Xu
Journal:  Cell       Date:  2010-04-16       Impact factor: 41.582

5.  Activation of TRPV3 Regulates Inflammatory Actions of Human Epidermal Keratinocytes.

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Journal:  J Invest Dermatol       Date:  2017-09-28       Impact factor: 8.551

6.  The structure of lipid nanodisc-reconstituted TRPV3 reveals the gating mechanism.

Authors:  Hiroto Shimada; Tsukasa Kusakizako; T H Dung Nguyen; Tomohiro Nishizawa; Tomoya Hino; Makoto Tominaga; Osamu Nureki
Journal:  Nat Struct Mol Biol       Date:  2020-06-22       Impact factor: 15.369

7.  Towards automated crystallographic structure refinement with phenix.refine.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-03-16

8.  A novel mutation in TRPV3 gene causes atypical familial Olmsted syndrome.

Authors:  Cheng Ni; Ming Yan; Jia Zhang; Ruhong Cheng; Jianying Liang; Dan Deng; Zhen Wang; Ming Li; Zhirong Yao
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9.  Regulatory switch at the cytoplasmic interface controls TRPV channel gating.

Authors:  Lejla Zubcevic; William F Borschel; Allen L Hsu; Mario J Borgnia; Seok-Yong Lee
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10.  RELION: implementation of a Bayesian approach to cryo-EM structure determination.

Authors:  Sjors H W Scheres
Journal:  J Struct Biol       Date:  2012-09-19       Impact factor: 2.867

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  4 in total

Review 1.  TRP channels: a journey towards a molecular understanding of pain.

Authors:  Tamara Rosenbaum; Sara L Morales-Lázaro; León D Islas
Journal:  Nat Rev Neurosci       Date:  2022-07-13       Impact factor: 38.755

Review 2.  Ligand-Binding Sites in Vanilloid-Subtype TRP Channels.

Authors:  Maria V Yelshanskaya; Alexander I Sobolevsky
Journal:  Front Pharmacol       Date:  2022-05-16       Impact factor: 5.988

3.  Structural mechanism of TRPV3 channel inhibition by the anesthetic dyclonine.

Authors:  Arthur Neuberger; Kirill D Nadezhdin; Alexander I Sobolevsky
Journal:  Nat Commun       Date:  2022-05-19       Impact factor: 17.694

Review 4.  Druggable Lipid Binding Sites in Pentameric Ligand-Gated Ion Channels and Transient Receptor Potential Channels.

Authors:  Wayland W L Cheng; Mark J Arcario; John T Petroff
Journal:  Front Physiol       Date:  2022-01-04       Impact factor: 4.566

  4 in total

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