Literature DB >> 34460041

Comparative transcriptomic analysis of the brain in Takifugu rubripes shows its tolerance to acute hypoxia.

Mingxiu Bao1, Fengqin Shang1,2, Fujun Liu1, Ziwen Hu1, Shengnan Wang1, Xiao Yang1, Yundeng Yu1, Hongbin Zhang1, Chihang Jiang1, Jielan Jiang1, Yang Liu3, Xiuli Wang4.   

Abstract

Hypoxia in water that caused by reduced levels of oxygen occurred frequently, due to the complex aquatic environment. Hypoxia tolerance for fish depends on a complete set of coping mechanisms such as oxygen perception and gene-protein interaction regulation. The present study examined the short-term effects of hypoxia on the brain in Takifugu rubripes. We sequenced the transcriptomes of the brain in T. rubripes to study their response mechanism to acute hypoxia. A total of 167 genes were differentially expressed in the brain of T. rubripes after exposed to acute hypoxia. Gene ontology and KEGG enrichment analysis indicated that hypoxia could cause metabolic and neurological changes, showing the clues of their adaptation to acute hypoxia. As the most complex and important organ, the brain of T. rubripes might be able to create a self-protection mechanism to resist or reduce damage caused by acute hypoxia stress.
© 2021. The Author(s), under exclusive licence to Springer Nature B.V.

Entities:  

Keywords:  Acute hypoxia; Brain; Gene expression; Takifugu rubripes; Transcriptome

Mesh:

Substances:

Year:  2021        PMID: 34460041     DOI: 10.1007/s10695-021-01008-6

Source DB:  PubMed          Journal:  Fish Physiol Biochem        ISSN: 0920-1742            Impact factor:   2.794


  64 in total

Review 1.  Fish response to hypoxia stress: growth, physiological, and immunological biomarkers.

Authors:  Mohsen Abdel-Tawwab; Mohamed N Monier; Seyed Hossein Hoseinifar; Caterina Faggio
Journal:  Fish Physiol Biochem       Date:  2019-02-04       Impact factor: 2.794

2.  "Dark" Purkinje cells of the cerebellar cortex.

Authors:  C Léránth; J Hámori
Journal:  Acta Biol Acad Sci Hung       Date:  1970

3.  Characterization of the pufferfish (Fugu) genome as a compact model vertebrate genome.

Authors:  S Brenner; G Elgar; R Sandford; A Macrae; B Venkatesh; S Aparicio
Journal:  Nature       Date:  1993-11-18       Impact factor: 49.962

4.  Adaptive hypoxic tolerance in the subterranean mole rat Spalax ehrenbergi: the role of vascular endothelial growth factor.

Authors:  A Avivi; M B Resnick; E Nevo; A Joel; A P Levy
Journal:  FEBS Lett       Date:  1999-06-11       Impact factor: 4.124

Review 5.  Hypoxia tolerance in reptiles, amphibians, and fishes: life with variable oxygen availability.

Authors:  Philip E Bickler; Leslie T Buck
Journal:  Annu Rev Physiol       Date:  2007       Impact factor: 19.318

Review 6.  Role of increased glomerular protein traffic in the progression of renal failure.

Authors:  I Bruzzi; A Benigni; G Remuzzi
Journal:  Kidney Int Suppl       Date:  1997-11       Impact factor: 10.545

7.  Hypoxia-inducible factor-1α is involved in isoflurane-induced blood-brain barrier disruption in aged rats model of POCD.

Authors:  Yiyun Cao; Zhengqian Li; Hongping Li; Cheng Ni; Lunxu Li; Ning Yang; Chengmei Shi; Yanfeng Zhong; Dehua Cui; Xiangyang Guo
Journal:  Behav Brain Res       Date:  2017-09-05       Impact factor: 3.332

8.  Comparative transcriptome analyses of adzuki bean weevil (Callosobruchus chinensis) response to hypoxia and hypoxia/hypercapnia.

Authors:  S F Cui; L Wang; L Ma; Y L Wang; J P Qiu; Zh Ch Liu; X Q Geng
Journal:  Bull Entomol Res       Date:  2018-07-12       Impact factor: 1.750

9.  HTSeq--a Python framework to work with high-throughput sequencing data.

Authors:  Simon Anders; Paul Theodor Pyl; Wolfgang Huber
Journal:  Bioinformatics       Date:  2014-09-25       Impact factor: 6.937

Review 10.  Insights into the role of neuronal glucokinase.

Authors:  Ivan De Backer; Sufyan S Hussain; Stephen R Bloom; James V Gardiner
Journal:  Am J Physiol Endocrinol Metab       Date:  2016-05-17       Impact factor: 4.310

View more
  1 in total

1.  Transcriptome Analysis Identifies Key Metabolic Changes in the Brain of Takifugu rubripes in Response to Chronic Hypoxia.

Authors:  Fengqin Shang; Yun Lu; Yan Li; Bing Han; Renjie Wei; Shengmei Liu; Ying Liu; Yang Liu; Xiuli Wang
Journal:  Genes (Basel)       Date:  2022-07-27       Impact factor: 4.141

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.