Literature DB >> 34459488

PreTP-EL: prediction of therapeutic peptides based on ensemble learning.

Yichen Guo1, Ke Yan1, Hongwu Lv1, Bin Liu1.   

Abstract

Therapeutic peptides are important for understanding the correlation between peptides and their therapeutic diagnostic potential. The therapeutic peptides can be further divided into different types based on therapeutic function sharing different characteristics. Although some computational approaches have been proposed to predict different types of therapeutic peptides, they failed to accurately predict all types of therapeutic peptides. In this study, a predictor called PreTP-EL has been proposed via employing the ensemble learning approach to fuse the different features and machine learning techniques in order to capture the different characteristics of various therapeutic peptides. Experimental results showed that PreTP-EL outperformed other competing methods. Availability and implementation: A user-friendly web-server of PreTP-EL predictor is available at http://bliulab.net/PreTP-EL.
© The Author(s) 2021. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  ensemble learning; genetic algorithm; therapeutic peptides

Mesh:

Substances:

Year:  2021        PMID: 34459488     DOI: 10.1093/bib/bbab358

Source DB:  PubMed          Journal:  Brief Bioinform        ISSN: 1467-5463            Impact factor:   11.622


  7 in total

1.  ATGPred-FL: sequence-based prediction of autophagy proteins with feature representation learning.

Authors:  Shihu Jiao; Zheng Chen; Lichao Zhang; Xun Zhou; Lei Shi
Journal:  Amino Acids       Date:  2022-03-14       Impact factor: 3.520

2.  Comparative analysis of machine learning algorithms on the microbial strain-specific AMP prediction.

Authors:  Boris Vishnepolsky; Maya Grigolava; Grigol Managadze; Andrei Gabrielian; Alex Rosenthal; Darrell E Hurt; Michael Tartakovsky; Malak Pirtskhalava
Journal:  Brief Bioinform       Date:  2022-07-18       Impact factor: 13.994

3.  MPMABP: A CNN and Bi-LSTM-Based Method for Predicting Multi-Activities of Bioactive Peptides.

Authors:  You Li; Xueyong Li; Yuewu Liu; Yuhua Yao; Guohua Huang
Journal:  Pharmaceuticals (Basel)       Date:  2022-06-03

4.  Immunoglobulin Classification Based on FC* and GC* Features.

Authors:  Hao Wan; Jina Zhang; Yijie Ding; Hetian Wang; Geng Tian
Journal:  Front Genet       Date:  2022-01-24       Impact factor: 4.599

Review 5.  Research on the Computational Prediction of Essential Genes.

Authors:  Yuxin Guo; Ying Ju; Dong Chen; Lihong Wang
Journal:  Front Cell Dev Biol       Date:  2021-12-06

6.  Prediction of anti-inflammatory peptides by a sequence-based stacking ensemble model named AIPStack.

Authors:  Hua Deng; Chaofeng Lou; Zengrui Wu; Weihua Li; Guixia Liu; Yun Tang
Journal:  iScience       Date:  2022-08-17

7.  Testing Gene-Gene Interactions Based on a Neighborhood Perspective in Genome-wide Association Studies.

Authors:  Yingjie Guo; Honghong Cheng; Zhian Yuan; Zhen Liang; Yang Wang; Debing Du
Journal:  Front Genet       Date:  2021-12-08       Impact factor: 4.599

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.