| Literature DB >> 34456969 |
Isabel Pimenta1,2, Hugo Mateus1,3, Santiago Rodrigues-Manica1,4, Rita Pinheiro-Torres1,4, Agna Neto1,4, Lúcia Domingues1,5, Carolina Lage Crespo1, Atlas Sardoo1,6, Pedro Machado7, Jaime C Branco1,4, Susana N Silva8, Fernando M Pimentel-Santos1,4.
Abstract
BACKGROUND: Spondyloarthritis (SpA) are the most common group of chronic inflammatory rheumatic diseases affecting about 1.5% of the adult Caucasian population. Low back pain is the most common symptom. The aetiopathogenesis of SpA is multifactorial, with well-known genetic and environmental contributions. Furthermore, muscle properties might also be involved in the pathophysiological process and these could be modulated by the genetic background. Alpha-actinin-3 (ACTN3) and Vitamin D receptor (VDR) genes are well-known genes related with muscle performance. Our aim was to analyze four SNPs of these genes and to evaluate their influence in axial SpA (axSpA) susceptibility, phenotype and muscle properties.Entities:
Keywords: ACTN3; VDR; muscle; muscle performance; spondyloarthropathies
Year: 2021 PMID: 34456969 PMCID: PMC8385750 DOI: 10.3389/fgene.2021.688984
Source DB: PubMed Journal: Front Genet ISSN: 1664-8021 Impact factor: 4.599
Identification of all genetic variants included in the study.
| Gene | dsSNP ID (rs) | SNP | Variant type | A.A residue | Context sequence [VIC/FAM] |
|
| rs1815739 |
| Non-sense | R/STOP | CAAGGCAACACTGCCCGAGGCTGAC |
|
| rs2228570 |
| Missense | K/R | GGAAGTGCTGGCCGCCATTGCCTCC |
|
| rs731236 |
| Silent | I/I | TGGACAGGCGGTCCTGGATGGCCTC |
|
| rs7975232 |
| Intron | – | AAGGCACAGGAGCTCTCAGCTGGGC |
Study population characterization. Cases group (n = 27) and Healthy control group (n = 24).
| Characteristics | Cases, | Mean ± SD | Controls, | Mean ± SD | |
|
| |||||
| 0–29 | 3 (11.1) | 4 (16.7) | |||
| 30–39 | 14 (51.9) | 36.8 ± 7.1 | 10 (41.7) | 36.8 ± 7.7 | |
| 40–50 | 10 (37.0) | 10 (41.7) | 0.728 | ||
|
| |||||
| Male | 18 (66.7) | – | 15 (62.5) | – | |
| Female | 9 (33.3) | 9 (37.5) | 0.756 | ||
|
| |||||
| Low | 22 (81.5) | – | 21 (87.5) | – | |
| High | 5 (18.5) | 3 (12.5) | 0.555 | ||
|
| |||||
| Positive | 21 (80.8) | ||||
| Negative | 5 (19.2) | – | – | – | |
| Not available | 1 | – | |||
| Body height (cm) | – | 170.4 ± 7.4 | – | 171.1 ± 8.8 | |
| Body weight (kg) | – | 75.9 ± 12.7 | – | 71.8 ± 12.9 | |
|
| |||||
| Low weight | 1 (4.2) | 1 (4.3) | |||
| Normoponderal | 11 (45.8) | 13 (56.5) | 24.5 ± 3.7 | 0.410 | |
| Overweight | 7 (29.2) | 26.2 ± 4.3 | 8 (34.8) | ||
| Obesity | 5 (20.8) | 1 (4.3) | |||
| Not available | 3 | 1 | |||
|
| |||||
| <4 | 22 (81.5) | 3.0 ± 2.0 | – | – | – |
| ≥4 | 5 (18.5) | ||||
|
| |||||
| ≤4 | 23 (85.2) | 2.2 ± 2.7 | – | – | – |
| >4 | 4 (14.8) | ||||
|
| |||||
| <3 | 24 (88.9) | 1.1 ± 1.3 | – | – | – |
| ≥3 | 3 (11.1) | ||||
Characterization of multifidus muscle physical properties, strength and mass.
| Characteristics | Cases | Controls | ORcrude (95% CI) | |
|
| ||||
|
| ||||
| Low | 6 (22.2) | 9 (37.5) | 1.000 (reference) | |
| Intermediate | 9 (33.3) | 10 (41.7) | 0.185 | 1.350 (0.343–5.315) |
| High | 12 (44.4) | 5 (20.8) | 3.600 (0.829–15.628) | |
|
| ||||
| Low | 6 (22.2) | 9 (37.5) | 1.000 (reference) | |
| Intermediate | 12 (44.4) | 7 (29.2) | 0.406 | 2.571 (0.640–10.338) |
| High | 9 (33.3) | 8 (33.3) | 1.687 (0.414–6.878) | |
|
| ||||
| Low | 5 (18.5) | 11 (45.8) | 1.000 (reference) | |
| Intermediate | 12 (44.4) | 6 (25.0) | 0.099 | 4.400 (1.041–18.599)† |
| High | 10 (37.0) | 7 (29.2) | 3.143 (0.751–13.159) | |
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| ||||
|
| ||||
| Normal | 25 (92.6) | 22 (100.0) | 0.192 | N.D. |
| Reduced | 2 (7.4) | 0 (0.0) | ||
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| ||||
|
| ||||
| Low | 1 (4.2) | 22 (100.0) | ||
| Normal range | 19 (79.2) | 0 (0.0) | 0.724 | N.D. |
| Above | 4 (16.7) | |||
|
| ||||
|
| ||||
| Low | 9 (33.3) | 0 (0.0) |
| N.D. |
| Intermedium | 8 (29.6) | 7 (31.8) | ||
| High | 10 (37.0) | 15 (68.2) | ||
|
| ||||
| Good | 6 (27.3) | 12 (57.1) |
| 1.000 (reference) |
| Low | 16 (72.7) | 9 (42.9) | 3.556 (0.993–12.733)‡ | |
Genotype distribution between axSpA patients and controls, for ACTN3 and VDR polymorphisms: rs1815739 (R577X); rs2228570 (FokI), rs731236 (TaqI), and rs7975232 (ApaI).
| Genotype | Cases | Controls | ORa (95% CI) | |
|
| ||||
| C/C | 8 (30.8) | 6 (25.0) | 1.000 (reference) | |
| C/T | 15 (57.7) | 12 (50.0) | 0.463 | 0.375 (0.066–2.145) |
| T/T | 3 (11.5) | 6 (25.0) | 0.938 (0.255–3.449) | |
| C/T + T/T | 18 (69.2) | 18 (75.0) | 0.750 (0.216–2.602) | |
|
| ||||
| A/A | 4 (15.4) | 2 (8.3) | 1.000 (reference) | |
| A/G | 12 (46.2) | 16 (66.7) | 0.339 | 0.375 (0.059–2.397) |
| G/G | 10 (38.5) | 6 (25.0) | 0.833 (0.115–6.013) | |
| A/G + G/G | 22 (84.6) | 22 (91.7) | 0.500 (0.083–3.017) | |
|
| ||||
| A/A | 11 (42.3) | 7 (30.4) | 1.000 (reference) | |
| A/G | 7 (26.9) | 9 (39.1) | 0.599 | 0.495 (0.126–1.945) |
| G/G | 8 (30.8) | 7 (30.4) | 0.727 (0.181–2.914) | |
| A/G + G/G | 15 (57.7) | 16 (69.6) | 0.597 (0.183–1.943) | |
|
| ||||
| C/C | 7 (28.0) | 3 (12.5) | 1.000 (reference) | |
| C/A | 9 (36.0) | 10 (41.7) | 0.400 | 0.351 (0.070–1.761) |
| A/A | 9 (36.0) | 11 (45.8) | 0.386 (0.076–1.959) | |
| C/A + A/A | 18 (72.0) | 21 (87.5) | 0.367 (0.083–1.633) |
Clinical characteristics across ACTN3 and VDR genes polymorphisms.
| SNPs | BASDAI | BASFI | BASMI | |||||||
| Cases | Cases | Cases | ||||||||
| No active disease | Active disease | Low functional repercussion | High functional repercussion | Mild score | Severe score | Controls | ||||
|
| ||||||||||
| C/C | 6 (28.6) | 2 (40.0) | 6 (27.3) | 2 (50.0) | 8 (34.8) | 0 (0.0) | 6 (25.0) | |||
| C/T | 12 (57.1) | 3 (60.0) | 0.700 | 13 (59.1) | 2 (50.0) | 0.633 | 12 (52.2) | 3 (100.0) | 0.398 | 12 (50.0) |
| T/T | 3 (14.3) | 0 (0.0) | 3 (13.6) | 0 (0.0) | 3 (13.0) | 0 (0.0) | 6 (25.0) | |||
|
| ||||||||||
| A/A | 3 (14.3) | 1 (20.0) | 3 (13.6) | 1 (25.0) | 4 (17.4) | 0 (0.0) | 2 (8.3) | |||
| A/G | 9 (42.9) | 3 (60.0) | 0.534 | 9 (40.9) | 3 (75.0) | 0.247 | 9 (39.1) | 3 (100.0) | 0.188 | 16 (66.7) |
| G/G | 9 (42.9) | 1 (20.0) | 10 (45.5 | 0 (0.0) | 10 (43.5) | 0 (0.0) | 6 (25.0) | |||
|
| ||||||||||
| A/A | 9 (42.9) | 2 (40.0) | 11 (50.0) | 0 (0.0) | 10 (43.5) | 1 (33.3) | 7 (30.4) | |||
| A/G | 5 (23.8) | 2 (40.0) | 0.810 | 5 (22.7) | 2 (50.0) | 0.323 | 6 (26.1) | 1 (33.3) | 0.886 | 9 (39.1) |
| G/G | 7 (33.3) | 1 (20.0) | 6 (27.3) | 2 (50.0) | 7 (30.4) | 1 (33.3) | 7 (30.4) | |||
|
| ||||||||||
| C/C | 6 (28.6) | 1 (25.0) | 7 (31.8) | 0 (0.0) | 6 (26.1) | 1 (50.0) | 3 (12.5) | |||
| C/A | 7 (33.3) | 2 (50.0) | 0.692 | 8 (36.4) | 1 (33.3) | 0.415 | 9 (39.1) | 0 (0.0) | 0.528 | 10 (41.7) |
| A/A | 8 (38.1) | 1 (25.0) | 7 (31.8) | 2 (66.7) | 8 (34.8) | 1 (50.0) | 11 (45.8) | |||
Association of ACTN3 and VDR FokI polymorphisms and gait speed parameters.
| Characteristics | ORcrude (95% CI) | ORadjusted to | ORadjusted to |
|
| |||
| Good | 1.000 (reference) | 1.000 (reference) | 1.000 (reference) |
| Low | 3.556 (0.993–12.733)a |
|
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