| Literature DB >> 34452542 |
Soheila Sayad1, Seyed Alireza Dastgheib2, Meraj Farbod3, Fatemeh Asadian4, Mojgan Karimi-Zarchi5,6, Seyedali Salari7, Seyed Hossein Shaker8, Jalal Sadeghizadeh-Yazdi9, Hossein Neamatzadeh10,11.
Abstract
OBJECTIVE: Breast cancer is the most common cancer in American women, except for skin cancers. In this meta-analysis, the associations of polymorphisms within paraoxonase 1 (PON1), leptin (LEP) and leptin receptor (LEPR) genes with susceptibility to breast cancer were comprehensively evaluated.Entities:
Keywords: Leptin receptor; Paraoxonase 1; Polymorphism; breast cancer; leptin
Mesh:
Substances:
Year: 2021 PMID: 34452542 PMCID: PMC8629481 DOI: 10.31557/APJCP.2021.22.8.2323
Source DB: PubMed Journal: Asian Pac J Cancer Prev ISSN: 1513-7368
Figure 1Flowchart of Literature Search and Selection Process
Characteristics of the Case-Control Studies Included in the Meta-Analyses
| First Author | Country | SOC | Genotyping | Cases/ | Cases | Controls | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Genotype | Allele | Genotype | Allele | |||||||||||
| PON1 rs662 | AA | AG | GG | A | G | AA | AG | GG | A | G | ||||
| Stevens 2006 | USA (Caucasian) | PB | PCR-RFLP | 483/483 | 259 | 182 | 42 | 700 | 266 | 238 | 198 | 47 | 674 | 292 |
| Gallicchio 2007 | Brazil (Mixed) | PB | PCR-RFLP | 58/904 | 38 | 15 | 5 | 91 | 25 | 469 | 353 | 82 | 1291 | 517 |
| Antognelli 2009 | Italy (Caucasian) | PB | PCR-RFLP | 547/544 | 484 | 50 | 13 | 1018 | 76 | 340 | 152 | 52 | 832 | 256 |
| Naidu 2010 | Malaya (Asian) | HB | PCR-RFLP | 387/252 | 200 | 158 | 29 | 558 | 216 | 115 | 115 | 22 | 345 | 159 |
| Hussein 2011 | Egypt (African) | PB | PCR-RFLP | 100/100 | 51 | 41 | 8 | 143 | 57 | 46 | 42 | 12 | 134 | 66 |
| Kaya 2016 | Turkey (Caucasian) | HB | TaqMan | 32/35 | 10 | 11 | 11 | 31 | 33 | 5 | 13 | 17 | 23 | 47 |
| Wu 2017 | China (Asian) | HB | TaqMan | 365/378 | 155 | 156 | 54 | 466 | 264 | 167 | 156 | 55 | 490 | 266 |
| Agachan 2019 | Turkey (Caucasian) | PB | PCR-RFLP | 33/52 | 17 | 4 | 12 | 38 | 28 | 6 | 29 | 17 | 41 | 63 |
| PON1 rs854560 | TT | TA | AA | T | A | TT | TA | AA | T | A | ||||
| Stevens 2006 | USA (Caucasian) | PB | PCR-RFLP | 483/493 | 176 | 230 | 77 | 582 | 384 | 202 | 233 | 58 | 637 | 349 |
| Antognelli 2009 | Italy (Caucasian) | PB | PCR-RFLP | 547/607 | 107 | 115 | 325 | 329 | 765 | 188 | 188 | 231 | 564 | 650 |
| Naidu 2010 | Malaya (Asian) | HB | PCR-RFLP | 387/269 | 159 | 178 | 50 | 496 | 278 | 126 | 126 | 17 | 378 | 160 |
| Hussein 2011 | Egypt (African) | PB | PCR-RFLP | 100/76 | 19 | 21 | 60 | 59 | 141 | 35 | 35 | 6 | 105 | 47 |
| Wu 2017 | China (Asian) | HB | TaqMan | 483/483 | 284 | 72 | 9 | 640 | 90 | 346 | 30 | 2 | 722 | 34 |
| Farmohammadi 2019 | Iran (Asian) | HB | PCR-RFLP | 150/150 | 47 | 65 | 38 | 159 | 141 | 66 | 59 | 25 | 191 | 109 |
| LEP rs7799039 | GG | GA | AA | G | A | GG | GA | AA | G | A | ||||
| Snoussi 2006 | Tunisia (Caucasian) | HB | PCR-RFLP | 308/222 | 37 | 152 | 119 | 226 | 390 | 11 | 99 | 112 | 37 | 152 |
| Vairaktaris 2008 | Greece (Caucasian) | HB | PCR | 150/152 | 32 | 78 | 40 | 142 | 158 | 112 | 99 | 11 | 32 | 78 |
| Teras 2009 | USA (Caucasian) | PB | SNPstream | 1077/1086 | 445 | 445 | 187 | 1335 | 819 | 442 | 442 | 202 | 445 | 445 |
| Cleveland 2010 | USA (Caucasian) | PB | PCR | 1059/1101 | 226 | 492 | 341 | 944 | 1174 | 180 | 561 | 360 | 226 | 492 |
| Morris 2013 | Mexico (Mixed) | HB | PCR | 130/189 | 22 | 71 | 37 | 115 | 145 | 46 | 95 | 48 | 22 | 71 |
| Rostami 2015 | Iran (Asian) | HB | PCR-RFLP | 203/171 | 115 | 64 | 24 | 294 | 112 | 63 | 77 | 31 | 115 | 64 |
| Mahmoudi 2015 | Iran (Asian) | PB | PCR-RFLP | 45/41 | 27 | 11 | 7 | 65 | 25 | 17 | 19 | 5 | 27 | 11 |
| Karakus 2015 | Turkey (Caucasian) | PB | PCR | 199/185 | 49 | 105 | 45 | 203 | 195 | 47 | 98 | 40 | 49 | 105 |
| Mohammadzadeh 2015 | Iran (Asian) | HB | PCR-RFLP | 100/100 | 36 | 55 | 9 | 127 | 73 | 52 | 45 | 3 | 36 | 55 |
| Rodrigo 2017 | Sri Lanka (Asian) | PB | PCR | 80/80 | 32 | 43 | 5 | 107 | 53 | 53 | 24 | 3 | 32 | 43 |
| Liu 2018 | China (Asian) | HB | TOFMS | 434/442 | - | 182 | 252 | - | 686 | - | 206 | 236 | - | 182 |
| Geriki 2019 | India (Asian) | HB | PCR-RFLP | 93/186 | 15 | 45 | 33 | 75 | 111 | 54 | 75 | 57 | 15 | 45 |
| LEPR rs1137101 | AA | AG | GG | A | G | AA | AG | GG | A | G | ||||
| Snoussi 2006 | Tunisia (African) | NS | PCR-RFLP | 308/222 | 98 | 145 | 65 | 341 | 275 | 102 | 90 | 30 | 294 | 150 |
| Woo 2006 | Korea (Asian) | HB | PCR | 45/45 | 0 | 12 | 33 | 12 | 78 | 0 | 8 | 37 | 8 | 82 |
| Gallicchio 2007 | USA (Caucasian) | PB | TaqMan | 53/872 | 14 | 24 | 15 | 52 | 54 | 278 | 443 | 151 | 999 | 745 |
| Han 2008 | China (Asian) | HB | PCR | 240/500 | 33 | 41 | 166 | 107 | 373 | 12 | 78 | 410 | 102 | 898 |
| Okobia 2008 | Nigeria (African) | HB | PCR-RFLP | 209/209 | 46 | 107 | 56 | 199 | 219 | 56 | 107 | 46 | 219 | 199 |
| Teras 2009 | USA (Caucasian) | PB | SNP stream | 648/659 | 128 | 332 | 181 | 588 | 694 | 125 | 314 | 211 | 564 | 736 |
| Cleveland 2010 | USA (Caucasian) | PB | PCR | 1059/1098 | 173 | 521 | 355 | 867 | 1231 | 187 | 551 | 360 | 925 | 1271 |
| Nyante 2011 | USA (Caucasian) | PB | PCR | 1972/1775 | 494 | 952 | 526 | 1940 | 2004 | 416 | 847 | 485 | 1679 | 1817 |
| Kim 2012 | Korea (Asian) | HB | PCR | 390/447 | 8 | 88 | 294 | 104 | 676 | 6 | 91 | 350 | 103 | 791 |
| Mohammadzadeh 2014 | Iran (Asian) | HB | PCR-RFLP | 100/100 | 25 | 56 | 19 | 106 | 94 | 54 | 40 | 6 | 148 | 52 |
| Mahmoudi 2015 | Iran (Asian) | PB | PCR-RFLP | 45/41 | 19 | 25 | 1 | 63 | 27 | 17 | 18 | 6 | 52 | 30 |
| Wang 2015 | China (Asian) | PB | PCR-RFLP | 150/128 | 20 | 25 | 105 | 65 | 235 | 3 | 19 | 106 | 25 | 231 |
| Rodrigo 2017 | Sri Lanka (Asian) | PB | PCR-RFLP | 80/80 | 65 | 9 | 6 | 139 | 21 | 60 | 6 | 14 | 126 | 34 |
| El-Hussiny 2017 | Egypt (African) | NS | PCR-RFLP | 48/79 | 24 | 15 | 9 | 63 | 33 | 22 | 24 | 2 | 68 | 28 |
SOC, Source Of Controls; HB, Hospital Based; PB, Population Based; RFLP, Restriction Fragment Length Polymorphism; MAF, Minor Allele Frequency; HWE, Hardy-Weinberg Equilibrium
Meta-Analysis Results of Association between PON1 rs662 Polymorphism and Breast Cancer Risk
| Polymorphism | Genetic Model | Type of Model | Heterogeneity | Odds Ratio | Publication Bias | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| I2 (%) | PH | OR | 95% CI | Ztest | POR | PBeggs | PEggers | |||
| Overall | G vs. A | Random | 91.39 | ≤0.001 | 0.719 | 0.648-0.798 | -6.234 | ≤0.001 | 0.063 | 0.467 |
| GG vs. AA | Random | 73.8 | ≤0.001 | 0.542 | 0.332-0.885 | -2.446 | 0.014 | 0.035 | 0.221 | |
| GA vs. AA | Fixed | 14.09 | 0.32 | 1.011 | 0.800-1.278 | 0.092 | 0.926 | 0.901 | 0.374 | |
| GG+GA vs. AA | Random | 90.55 | ≤0.001 | 0.534 | 0.330-0.864 | -2.554 | 0.011 | 0.107 | 0.428 | |
| GG vs. GA+AA | Random | 62.05 | 0.01 | 0.72 | 0.492-1.053 | -1.696 | 0.09 | 0.173 | 0.576 | |
| Ethnicity | ||||||||||
| Caucasian | G vs. A | Random | 94.69 | ≤0.001 | 0.48 | 0.220-1.047 | -1.846 | 0.065 | 1 | 0.694 |
| GG vs. AA | Random | 82.08 | 0.001 | 0.341 | 0.134-0.866 | -2.262 | 0.024 | 1 | 0.479 | |
| GA vs. AA | Random | 57.75 | 0.069 | 0.894 | 0.481-1.661 | -0.355 | 0.723 | 0.734 | 0.486 | |
| GG+GA vs. AA | Random | 93.93 | ≤0.001 | 0.317 | 0.119-0.839 | -2.312 | 0.021 | 1 | 0.578 | |
| GG vs. GA+AA | Random | 78.94 | 0.003 | 0.594 | 0.278-1.269 | -1.345 | 0.179 | 0.734 | 0.872 | |
| Asian | G vs. A | Fixed | 41.99 | 0.189 | 0.951 | 0.810-1.116 | -0.617 | 0.537 | NA | NA |
| GG vs. AA | Fixed | 0 | 0.378 | 0.943 | 0.663-1.341 | -0.326 | 0.744 | NA | NA | |
| GA vs. AA | Fixed | 0 | 0.952 | 1.027 | 0.721-1.462 | 0.146 | 0.884 | NA | NA | |
| GG+GA vs. AA | Fixed | 50.42 | 0.159 | 0.931 | 0.751-1.153 | -0.658 | 0.511 | NA | NA | |
| GG vs. GA+AA | Fixed | 0 | 0.607 | 0.959 | 0.688-1.337 | -0.247 | 0.805 | NA | NA | |
| Source of Controls | ||||||||||
| HB | G vs. A | Fixed | 54.8 | 0.109 | 0.923 | 0.789-1.079 | -1.01 | 0.313 | 0.296 | 0.332 |
| GG vs. AA | Fixed | 36.58 | 0.207 | 0.878 | 0.625-1.233 | -0.75 | 0.453 | 0.296 | 0.105 | |
| GA vs. AA | Fixed | 0 | 0.918 | 1.05 | 0.750-1.470 | 0.284 | 0.777 | 0.296 | 0.163 | |
| GG+GA vs. AA | Fixed | 52.79 | 0.12 | 0.904 | 0.732-1.117 | -0.933 | 0.351 | 0.296 | 0.429 | |
| GG vs. GA+AA | Fixed | 0 | 0.514 | 0.907 | 0.662-1.243 | -0.609 | 0.543 | 0.296 | 0.007 | |
| PB | G vs. A | Random | 93.28 | ≤0.001 | 0.563 | 0.311-1.020 | -1.895 | 0.058 | 0.462 | 0.793 |
| GG vs. AA | Random | 77.27 | 0.001 | 0.445 | 0.215-0.920 | -2.186 | 0.029 | 0.462 | 0.645 | |
| GA vs. AA | Fixed | 49.26 | 0.096 | 0.976 | 0.704-1.353 | -0.147 | 0.883 | 0.22 | 0.354 | |
| GG+GA vs. AA | Random | 92.42 | ≤0.001 | 0.429 | 0.209-0.878 | -2.316 | 0.021 | 0.462 | 0.657 | |
| GG vs. GA+AA | Random | 73.1 | 0.005 | 658 | 0.351-1.232 | -1.307 | 0.191 | 0.806 | 0.96 | |
Figure 2Forest Plot for Association of the PON1 Polymorphisms with Breast Cancer Risk in Overall Population. A, rs662 (allele model); B, rs854560 (homozygote model)
Meta-Analysis Results of Association between LEP rs7799039 Polymorphism and Breast Cancer Risk
| Polymorphism | Genetic Model | Type of Model | Heterogeneity | Odds Ratio | Publication Bias | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| I2 (%) | PH | OR | 95% CI | Ztest | POR | PBeggs | PEggers | |||
| Overall | A vs. G | Random | 82.4 | ≤0.001 | 0.98 | 0.761-1.263 | -0.154 | 0.878 | 0.265 | 0.51 |
| AA vs. GG | Random | 71.3 | 0.001 | 0.905 | 0.572-1.432 | -0.428 | 0.669 | 0.386 | 0.405 | |
| AG vs. GG | Fixed | 12.18 | 0.335 | 0.993 | 0.857-1.150 | -0.095 | 0.924 | 0.901 | 0.57 | |
| AA+AG vs. GG | Random | 84.71 | ≤0.001 | 0.931 | 0.600-1.446 | -0.319 | 0.75 | 0.386 | 0.48 | |
| AA vs. AG+GG | Random | 46.09 | 0.072 | 0.931 | 0.723-1.197 | -0.56 | 0.576 | 0.71 | 0.506 | |
| Ethnicity | ||||||||||
| Asian | A vs. G | Random | 89.62 | ≤0.001 | 1.086 | 0.538-2.191 | 0.23 | 0.818 | 0.734 | 0.458 |
| AA vs. GG | Random | 76.03 | 0.006 | 1.303 | 0.404-4.203 | 0.443 | 0.658 | 0.308 | 0.092 | |
| AG vs. GG | Fixed | 0 | 0.424 | 0.832 | 0.506-1.368 | -0.724 | 0.469 | 1 | 0.294 | |
| AA+AG vs. GG | Random | 90.89 | ≤0.001 | 1.051 | 0.393-2.810 | 0.099 | 0.921 | 0.734 | 0.609 | |
| AA vs. AG+GG | Fixed | 52.94 | 0.095 | 0.914 | 0.576-1.450 | -0.382 | 0.702 | 0.308 | 0.068 | |
| Caucasian | A vs. G | Random | 69.07 | 0.039 | 0.847 | 0.675-1.063 | -1.431 | 0.153 | 1 | 0.815 |
| AA vs. GG | Random | 71.32 | 0.031 | 0.672 | 0.390-1.157 | -1.434 | 0.151 | 1 | 0.759 | |
| AG vs. GG | Fixed | 56.67 | 0.099 | 1.014 | 0.863-1.190 | 0.164 | 0.869 | 1 | 0.646 | |
| AA+AG vs. GG | Fixed | 64.42 | 0.06 | 0.708 | 0.466-1.076 | -1.616 | 0.106 | 1 | 0.837 | |
| AA vs. AG+GG | Fixed | 64.81 | 0.058 | 0.903 | 0.776-1.052 | -1.31 | 0.19 | 1 | 0.747 | |
| Source of Controls | ||||||||||
| HB | A vs. G | Random | 90.52 | ≤0.001 | 1.037 | 0.542-1.986 | 0.11 | 0.913 | 0.296 | 0.497 |
| AA vs. GG | Random | 85.4 | 0.001 | 1.286 | 0.377-4.386 | 0.402 | 0.688 | 0.296 | 0.501 | |
| AG vs. GG | Fixed | 0 | 0.443 | 0.94 | 0.638-1.385 | -0.313 | 0.754 | 1 | 0.259 | |
| AA+AG vs. GG | Random | 90.74 | ≤0.001 | 1.09 | 0.412-2.886 | 0.173 | 0.863 | 0.846 | 0.066 | |
| AA vs. AG+GG | Random | 67.46 | 0.046 | 1.089 | 0.530-2.240 | 0.232 | 0.816 | 1 | 0.582 | |
| PB | A vs. G | Random | 74.44 | 0.008 | 1.067 | 0.771-1.477 | 0.391 | 0.696 | 0.734 | 0.477 |
| AA vs. GG | Fixed | 21.62 | 0.281 | 0.82 | 0.658-1.023 | -1.761 | 0.078 | 0.308 | 0.175 | |
| AG vs. GG | Fixed | 0 | 0.711 | 0.919 | 0.770-1.096 | -0.945 | 0.345 | 0.734 | 0.53 | |
| AA+AG vs. GG | Random | 84.25 | ≤0.001 | 1.019 | 0.552-1.880 | 0.059 | 0.953 | 0.734 | 0.525 | |
| AA vs. AG+GG | Fixed | 0 | 0.842 | 1 | 0.847-1.180 | -0.005 | 0.996 | 0.089 | 0.025 | |
Figure 3The Funnel Plots of Publication Bias for Association of the PON1, LEP and LEPR Polymorphism with Breast Cancer Risk in Overall Population. A: PON1 rs662 (allele mode); B: rs854560 (homozygote model), C: LEP rs7799039 (heterozygote model), and D: LEPR rs1137101 (dominant model)
Meta-Analysis Results of Association between PON1 rs854560 Polymorphism and Breast Cancer Risk
| Polymorphism | Genetic Model | Type of Model | Heterogeneity | Odds Ratio | Publication Bias | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| I2 (%) | PH | OR | 95% CI | Ztest | POR | PBeggs | PEggers | |||
| Overall | A vs. T | Random | 92.43 | ≤0.001 | 2.107 | 1.401-3.167 | 3.582 | ≤0.001 | 0.22 | 0.21 |
| AA vs. TT | Random | 81.73 | ≤0.001 | 3.214 | 1.757-5.879 | 3.789 | ≤0.001 | 0.462 | 0.27 | |
| AT vs. TT | Random | 81.85 | ≤0.001 | 0.379 | 0.208-0.691 | -3.17 | 0.002 | 1 | 0.478 | |
| AA+AT vs. TT | Random | 81.83 | ≤0.001 | 1.868 | 1.293-2.700 | 3.326 | 0.001 | 0.22 | 0.12 | |
| AA vs. AT+TT | Random | 84.64 | ≤0.001 | 3.067 | 1.687-5.575 | 3.674 | ≤0.001 | 0.462 | 0.375 | |
| Ethnicity | ||||||||||
| Asian | A vs. T | Random | 82.54 | 0.003 | 1.785 | 1.150-2.772 | 2.581 | 0.01 | 0.296 | 0.248 |
| AA vs. TT | Fixed | 0 | 0.536 | 2.387 | 1.573-3.622 | 4.09 | ≤0.001 | 1 | 0.152 | |
| AG vs. TT | Random | 77.65 | 0.011 | 0.792 | 0.313-2.001 | -0.493 | 0.622 | 1 | 0.751 | |
| AA+AT vs. TT | Random | 93.29 | ≤0.001 | 1.212 | 0.469-3.132 | 0.397 | 0.691 | 1 | 0.802 | |
| AA vs. AT+TT | Fixed | 0 | 0.442 | 2.043 | 1.383-3.016 | 3.592 | ≤0.001 | 0.296 | 0.317 | |
| Caucasian | A vs. T | Random | 93.83 | ≤0.001 | 1.56 | 0.941-2.587 | 1.725 | 0.085 | NA | NA |
| AA vs. TT | Fixed | 73.12 | 0.054 | 2.086 | 1.650-2.638 | 6.143 | ≤0.001 | NA | NA | |
| AG vs. TT | Random | 79.06 | 0.029 | 0.559 | 0.331-0.946 | -2.169 | 0.03 | NA | NA | |
| AA+AT vs. TT | Random | 79.34 | 0.028 | 1.491 | 0.987-2.253 | 1.897 | 0.058 | NA | NA | |
| AA vs. AT+TT | Fixed | 81.38 | 0.02 | 1.878 | 1.134-3.109 | 2.45 | 0.014 | NA | NA | |
| Source of Controls | ||||||||||
| HB | A vs. T | Random | 82.54 | 0.003 | 1.785 | 1.150-2.772 | 2.581 | 0.01 | 0.296 | 0.248 |
| AA vs. TT | Random | 90.35 | ≤0.001 | 3.48 | 1.455-8.321 | 2.804 | 0.005 | 1 | 0.478 | |
| AG vs. TT | Random | 90.91 | ≤0.001 | 0.316 | 0.131-0.761 | -2.567 | 0.01 | 1 | 0.501 | |
| AA+AT vs. TT | Random | 93.29 | ≤0.001 | 1.212 | 0.469-3.132 | 0.397 | 0.691 | 1 | 0.802 | |
| AA vs. AT+TT | Random | 92.04 | ≤0.001 | 3.359 | 1.432-7.879 | 2.785 | 0.005 | 1 | 0.566 | |
| PB | A vs. T | Random | 95.14 | ≤0.001 | 2.254 | 1.228-4.140 | 2.622 | 0.009 | 1 | 0.482 |
| AA vs. TT | Random | 90.35 | ≤0.001 | 3.48 | 1.455-8.321 | 2.804 | 0.005 | 1 | 0.478 | |
| AG vs. TT | Random | 90.91 | ≤0.001 | 0.316 | 0.131-0.761 | -2.567 | 0.01 | 1 | 0.501 | |
| AA+AT vs. TT | Random | 82.19 | 0.004 | 1.84 | 1.137-2.976 | 2.483 | 0.013 | 0.296 | 0.413 | |
| AA vs. AT+TT | Fixed | 0 | 0.465 | 2.038 | 1.380-3.009 | 3.58 | ≤0.001 | 0.296 | 0.33 | |
Meta-Analysis Results of Association between LEPR rs1137101 Polymorphism and Breast Cancer Risk
| Polymorphism | Genetic Model | Type of Model | Heterogeneity | Odds Ratio | Publication Bias | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| I2 (%) | PH | OR | 95% CI | Ztest | POR | PBeggs | PEggers | |||
| Overall | A vs. G | Random | 86.48 | ≤0.001 | 0.943 | 0.780-1.139 | -0.614 | 0.539 | 0.661 | 0.781 |
| AA vs. GG | Random | 84.75 | ≤0.001 | 0.928 | 0.631-1.365 | -0.379 | 0.705 | 0.76 | 0.867 | |
| AG vs. GG | Random | 74.12 | ≤0.001 | 0.991 | 0.763-1.289 | -0.064 | 0.949 | 0.669 | 0.717 | |
| AA+AG vs. GG | Random | 83.33 | ≤0.001 | 0.994 | 0.742-1.331 | -0.041 | 0.967 | 0.427 | 0.761 | |
| AA vs. AG+GG | Random | 76.74 | ≤0.001 | 0.965 | 0.767-1.214 | -0.302 | 0.763 | 0.745 | 0.867 | |
| Ethnicity | ||||||||||
| Caucasian | A vs. G | Fixed | 41.76 | 0.161 | 0.977 | 0.916-1.043 | -0.688 | 0.491 | 0.734 | 0.349 |
| AA vs. GG | Fixed | 41.86 | 0.16 | 0.96 | 0.842-1.094 | -0.615 | 0.539 | 0.734 | 0.285 | |
| AG vs. GG | Fixed | 0 | 0.92 | 0.983 | 0.873-1.107 | -0.287 | 0.774 | 1 | 0.202 | |
| AA+AG vs. GG | Fixed | 0 | 0.859 | 0.996 | 0.892-1.112 | -0.071 | 0.944 | 1 | 0.273 | |
| AA vs. AG+GG | Fixed | 55.12 | 0.083 | 0.976 | 0.883-1.079 | -0.468 | 0.639 | 0.734 | 0.431 | |
| Asian | A vs. G | Random | 89.54 | ≤0.001 | 0.711 | 0.419-1.207 | -1.264 | 0.206 | 1 | 0.907 |
| AA vs. GG | Random | 87.83 | ≤0.001 | 0.442 | 0.124-1.570 | -1.262 | 0.207 | 1 | 0.762 | |
| AG vs. GG | Random | 86.29 | ≤0.001 | 0.749 | 0.273-2.054 | -0.562 | 0.574 | 0.452 | 0.394 | |
| AA+AG vs. GG | Random | 90.55 | ≤0.001 | 0.595 | 0.201-1.758 | -0.939 | 0.347 | 0.452 | 0.397 | |
| AA vs. AG+GG | Random | 72.07 | 0.001 | 0.664 | 0.413-1.066 | -1.697 | 0.09 | 0.763 | 0.888 | |
| African | A vs. G | Fixed | 3.035 | 0.357 | 1.386 | 1.161-1.654 | 3.612 | ≤0.001 | 1 | 0.813 |
| AA vs. GG | Fixed | 2.894 | 0.358 | 1.931 | 1.339-2.786 | 3.52 | ≤0.001 | 1 | 0.598 | |
| AG vs. GG | Fixed | 61.34 | 0.075 | 1.337 | 1.010-1.772 | 2.026 | 0.043 | 0.296 | 0.11 | |
| AA+AG vs. GG | Fixed | 0 | 0.423 | 1.647 | 1.268-2.137 | 3.747 | ≤0.001 | 1 | 0.916 | |
| AA vs. AG+GG | Fixed | 63.26 | 0.066 | 1.845 | 0.997-3.415 | 1.949 | 0.051 | 0.296 | 0.199 | |
| Source of Controls | ||||||||||
| HB | A vs. G | Random | 93.07 | ≤0.001 | 0.931 | 0.504-1.721 | -0.227 | 0.82 | 0.806 | 0.83 |
| AA vs. GG | Random | 93.33 | ≤0.001 | 0.964 | 0.209-4.445 | -0.047 | 0.963 | 1 | 0.815 | |
| AG vs. GG | Random | 90.34 | ≤0.001 | 0.866 | 0.285-2.629 | -0.254 | 0.799 | 0.734 | 0.597 | |
| AA+AG vs. GG | Random | 93.72 | ≤0.001 | 0.836 | 0.230-3.041 | -0.272 | 0.786 | 0.734 | 0.651 | |
| AA vs. AG+GG | Random | 81.48 | ≤0.001 | 0.963 | 0.567-1.635 | -0.141 | 0.888 | 0.806 | 0.43 | |
| PB | A vs. G | Random | 86.15 | ≤0.001 | 0.816 | 0.666-0.999 | -1.967 | 0.049 | 0.465 | 0.244 |
| AA vs. GG | Random | 72.44 | 0.001 | 0.893 | 0.758-1.051 | -1.361 | 0.173 | 0.367 | 0.271 | |
| AG vs. GG | Fixed | 8.403 | 0.364 | 0.979 | 0.871-1.100 | -0.359 | 0.719 | 0.763 | 0.753 | |
| AA+AG vs. GG | Fixed | 40.64 | 0.12 | 0.974 | 0.875-1.086 | -0.471 | 0.638 | 0.133 | 0.23 | |
| AA vs. AG+GG | Random | 67.54 | 0.005 | 0.882 | 0.699-1.112 | -1.063 | 0.288 | 0.367 | 0.249 | |