| Literature DB >> 34452361 |
Magdalena Stachnik1, Marek Matras1, Ewa Borzym1, Joanna Maj-Paluch1, Michał Reichert1.
Abstract
Recently, Poland has become a leading producer of sturgeon meat and caviar in Europe and is one of the largest in the world. The growing importance of this branch of aquaculture means that diseases of these fish, especially viral ones, are becoming the object of interest for ichthyopathologists. In recent years, there have been increasing reports of health problems in the dynamically developing sturgeon farming. The greatest risk appears to be emerging infectious diseases that are caused by viruses and that can become a serious threat to the development of the aquaculture industry and the success of sturgeon restitution programs undertaken in many European countries, including Poland. In this paper, an attempt was made to determine the spread of the two most important groups of viruses in Polish sturgeon farming: These include the herpesviruses and sturgeon nucleocytoplasmic large DNA viruses (sNCLDV), in particular, mimiviruses. In the years 2016-2020, 136 samples from nine farms were collected and tested by using the WSSK-1 cell line, PCR and Real Time PCR methods. All results were negative for herpesviruses. Out of the samples, 26% of the samples have been tested positive for mimiviruses. Sanger sequencing of mimiviruses demonstrated their affiliation with AciV-E. The sequence characterization confirmed the presence of both V1 and V2 lineages in Polish fish facilities, but variant V2 seems to be more widespread, as is observed in other European countries.Entities:
Keywords: AciHV-1; AciHV-2; AciV-E; herpesvirus; mimivirus; sNCLDV; sturgeon
Mesh:
Substances:
Year: 2021 PMID: 34452361 PMCID: PMC8402841 DOI: 10.3390/v13081496
Source DB: PubMed Journal: Viruses ISSN: 1999-4915 Impact factor: 5.048
Figure 1Siberian sturgeon with multiple haemorrhages (farm 5).
Figure 2Russian sturgeon from farm 8 showing clinical signs: (a) haemorrhage on the rostrum (b) splenomegaly, intestinal haemorrhage and swim bladder filled with yellowish fluid.
Sequences of the oligonucleotides and probes used in this study.
| Method | Sequence | Source |
|---|---|---|
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| Aci16SFw: AAGGAACTCGGCAAACACGA | [ |
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| F-oPVP339: GATAGGGTACAAGAGACATTC | [ |
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| F-oPVP346: TCAAAGTCTGGGACCTCTA | [ |
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| F-308: 5′-ACCTCGTGTTGATCG-3′ | [ |
Fish samples description. (S) Samples sequenced for the genetic analysis of mimivirus.
| Number of Farm /Year of Sampling | Description of Fish | Number of Sample | Number of Samples | Number of Positive Samples (Real Time) | GenBank Accession Number |
|---|---|---|---|---|---|
| 1/2016 | Siberian sturgeon | PL1601-PL1647 | 7/47 | 1601 (s), 1602 (s), | MG212658, MG212659, MG212660 |
| 2/2016 | Siberian sturgeon | PL1648-Pl1653 | 1/6 | 1650 | - |
| 3/2017 | Siberian sturgeon | PL1701-PL1712 | 6/12 | 1706 (s), | MG212661 |
| 4/2017 | Siberian sturgeon | PL1713-PL1718 | 0/6 | - | - |
| 5/2017 | Siberian sturgeon | PL1719-PL1729 | 8/11 | 1719 (s), 1719.1 (s), | MG212662, MG212663, MG212664, MG212665, MG212666, MG212667 |
| 6/2017 | Siberian sturgeon | PL1730-PL1739 | 0/10 | - | - |
| 7/2017 | Russian sturgeon | PL1740-PL1750 | 0/10 | - | - |
| 8/2018 | Russian sturgeon | PL1801-PL1806 | 2/6 | 1801 (s), 1802 (s) | MN542940, MN542941 |
| 9/2020 | Siberian sturgeon | PL2001-PL2028 | 6/28 | 2001 (s), 2002 (s), | MT735127, |
Figure 3Analysis of the partial mimivirus major capsid protein (MCP) sequences using the neighbor-joining (NJ) and maximum-likelihood methods (ML). For each sequence, the country of origin is indicated (two-letter country code: PL—Poland; UA—Ukraine; IT—Italy; FR—France; EU—other European countries). Polish isolates are marked in blue (var1) and red (var2). Bars indicate the scale of genetic distance between sequences.
Figure 4Aligned Polish sequences with highlighted motifs characteristic for American strains (var1-AAACAATA) and European variant (var2-GCTTAATA) of mimivirus.