Literature DB >> 34437846

The N-terminus of MIF regulates the dynamic profile of residues involved in CD74 activation.

Andrew Parkins1, Erin Skeens2, C Michael McCallum1, George P Lisi3, Georgios Pantouris4.   

Abstract

Macrophage migration inhibitory factor (MIF) is an immunomodulatory protein with a pathogenic activity in various inflammatory disorders, autoimmune diseases, and cancer. The majority of MIF-triggered pathological conditions are associated with activation of the cell surface receptor CD74. In the absence of small molecule antagonists that directly target CD74, MIF variants and MIF-ligand complexes have served as modulators of CD74 activity. These molecules have been reported to have either antagonistic or agonistic effects against the receptor, although the mechanistic parameters that distinguish the two groups are largely unknown. Through molecular dynamics simulations and NMR experiments, we explored the relationship between MIF's catalytically active N-terminus and the surface residues important for the activation of CD74. We found that the two sites are connected via backbone dynamics that are propagated to the CD74 activation surface of MIF, from the β2 and β4 strands. Our results also provide mechanistic evidence that explain the functional characteristics of MIF variants, serving as CD74 agonists or antagonists. Such findings are of high importance for understanding the MIF-induced activation of CD74 as well as for the development of highly potent CD74 therapeutics.
Copyright © 2021 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2021        PMID: 34437846      PMCID: PMC8511117          DOI: 10.1016/j.bpj.2021.08.025

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   3.699


  33 in total

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Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

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Authors:  David E Shaw; Paul Maragakis; Kresten Lindorff-Larsen; Stefano Piana; Ron O Dror; Michael P Eastwood; Joseph A Bank; John M Jumper; John K Salmon; Yibing Shan; Willy Wriggers
Journal:  Science       Date:  2010-10-15       Impact factor: 47.728

3.  GROMACS: fast, flexible, and free.

Authors:  David Van Der Spoel; Erik Lindahl; Berk Hess; Gerrit Groenhof; Alan E Mark; Herman J C Berendsen
Journal:  J Comput Chem       Date:  2005-12       Impact factor: 3.376

4.  Receptor agonists of macrophage migration inhibitory factor.

Authors:  William L Jorgensen; Sunilkumar Gandavadi; Xin Du; Alissa A Hare; Alexander Trofimov; Lin Leng; Richard Bucala
Journal:  Bioorg Med Chem Lett       Date:  2010-09-29       Impact factor: 2.823

5.  VMD: visual molecular dynamics.

Authors:  W Humphrey; A Dalke; K Schulten
Journal:  J Mol Graph       Date:  1996-02

6.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

7.  Regulation of MIF Enzymatic Activity by an Allosteric Site at the Central Solvent Channel.

Authors:  Georgios Pantouris; Leepakshi Khurana; Anthony Ma; Erin Skeens; Krystle Reiss; Victor S Batista; George P Lisi; Elias J Lolis
Journal:  Cell Chem Biol       Date:  2020-05-19       Impact factor: 8.116

8.  Enzymatic ketonization of 2-hydroxymuconate: specificity and mechanism investigated by the crystal structures of two isomerases.

Authors:  H S Subramanya; D I Roper; Z Dauter; E J Dodson; G J Davies; K S Wilson; D B Wigley
Journal:  Biochemistry       Date:  1996-01-23       Impact factor: 3.162

9.  NMRFAM-SPARKY: enhanced software for biomolecular NMR spectroscopy.

Authors:  Woonghee Lee; Marco Tonelli; John L Markley
Journal:  Bioinformatics       Date:  2014-12-12       Impact factor: 6.937

10.  Macrophage CD74 contributes to MIF-induced pulmonary inflammation.

Authors:  Koichiro Takahashi; Kiyokazu Koga; Helena M Linge; Yinzhong Zhang; Xinchun Lin; Christine N Metz; Yousef Al-Abed; Kaie Ojamaa; Edmund J Miller
Journal:  Respir Res       Date:  2009-05-04
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