| Literature DB >> 34432797 |
Kristin E Wickstrøm1,2, Valeria Vitelli3, Ewan Carr4, Aleksander R Holten2,5, Rebecca Bendayan4,6, Andrew H Reiner7, Daniel Bean4,8, Tom Searle4,6, Anthony Shek9, Zeljko Kraljevic4, James Teo9,10, Richard Dobson4,6,8,11,12, Kristian Tonby2,13, Alvaro Köhn-Luque2, Erik K Amundsen1,14.
Abstract
BACKGROUND: Prediction models should be externally validated to assess their performance before implementation. Several prediction models for coronavirus disease-19 (COVID-19) have been published. This observational cohort study aimed to validate published models of severity for hospitalized patients with COVID-19 using clinical and laboratory predictors.Entities:
Mesh:
Year: 2021 PMID: 34432797 PMCID: PMC8386866 DOI: 10.1371/journal.pone.0255748
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Selection of prediction models for validation.
Predictors and outcomes in the four prediction models.
| Zhang models | Xie model | Allenbach model | |
|---|---|---|---|
| Country of development cohort | China | China | France |
| Predictors | Age, sex, neutrophil count, lymphocyte count, platelets count, CRP and creatinine at admission. | Age, LDH, SpO2, lymphocyte count (log, due to extreme value). | CRP (per 100mg/L), age, lymphocyte count, WHO scale (22) by admission. |
| Outcome | 1. Mortality | 1. Hospital mortality | 1. ICU transfer or death by 14 days after admission. |
| 2. Poor outcome, defined as developing ARDS, receiving intubation or ECMO treatment, ICU admission and death. |
CRP; C-reactive protein, LDH; lactate dehydrogenase, SpO2; Peripheral oxygen saturation, WHO; World Health Organization, ICU; Intensive care unit, NEWS2; National Early Warning score 2, eGFR; estimated glomerular filtration rate, ECMO; extracorporeal membrane oxygenation, ARDS; acute respiratory distress syndrome.
Validation of the four prediction models.
| Zhang1 | Zhang2 | Xie | Allenbach | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Validation | Dev. | Validation | Dev. | Validation | Dev. | Validation | Dev. | |||||
| Oslo | London | Wuhan | Oslo | London | Wuhan | Oslo | London | Wuhan | Oslo | London | Paris | |
| Participants, n | 307 | 1244 | 775 | 307 | 1244 | 775 | 307 | 1286 | 299 | 307 | 1248 | 152 |
| Outcome, n (%) | 32 (10) | 333 (27) | 33 (4.3) | 66 (22) | 419 (34) | 75 (9.7) | 32 (10) | 333 (26) | 155 (52) | 62 (20) | 389 (31) | 47 (32) |
| Missing values Predictors (%) | ||||||||||||
| • ALC | 3.9 | 4.6 |
| 3.9 | 4.6 |
| 3.9 | 7.7 |
| 3.9 | 4.9 |
|
| • ANC | 3.9 | 4.7 | NA | 3.9 | 4.7 | NA | NA | NA | NA | NA | NA | NA |
| • Platelets | NA | 4.5 | NA | NA | 4.5 | NA | NA | NA | NA | NA | NA | NA |
| • CRP | NA | 3.3 | NA | NA | 3.3 | NA | NA | NA | NA | NA | 3.6 | NA |
| • LDH | NA | NA | NA | NA | NA | NA | 12.4 | 87.8 | NA | NA | NA | NA |
| • Crea. | NA | 3.5 | NA | NA | 3.5 | NA | NA | NA | NA | NA | NA | NA |
| • SaO2 | NA | NA | NA | NA | NA | NA | NA | 33.3 | NA | NA | NA | NA |
| • WHO | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 33.8 | NA |
| Outcome (%) | None | 0.07 | NA | None | 4.1 | 0.065 | None | 0.07 | NA | None | 3.8 | 0.03 |
| AUROC (C-index) | 0.72 [0.62–0.82] | 0.64 [0.60–0.68] | 0.91 | 0.77 [0.70–0.84] | 0.67 [0.64–0.70] | 0.88 | 0.87 [0.79–0.95] | 0.79 [0.76–0.82] | 0.89 [0.86–0.93] | 0.81 [0.74–0.88] | 0.72 [0.68–0.75] | 0.79 |
| Calibration Slope | 0.57 [0.27–0.87] | 0.37 [0.18–0.56] | 0.98 [0.24–1.72] | 1.18 [0.59–1.77] | 0.75 [0.58–0.92] | 1.04 [0.79–1.29] | 0.86 [0.71–1.00] | 1.03 [0.89–1.17] | 1.00 [0.77–0.26] | 1.03 [0.79–1.28] | 0.76 [0.62–0.89] | 0.89 |
| Calibration intercept | 0.04 [-0.01–0.09] | 0.17 [0.10–0.23] | 0.19 [-0.10–0.48] | -0.02 [-0.17–0.12] | 0.10 [0.04–0.16] | 0.01 [-0.13–0.15] | -0.02 [-0.05–0.01] | -0.04 [-0.09–0.01] | 0.00 [-0.33–0.33] | 0.00 [-0,06–0.07] | 0.09 [0.04–0.14] | -0.06 |
| Calibration before recal.;slope | 0.47 [0.24–0.71] | 0.38 [0.18–0.58] | - | 1.56 [0.68–2.43] | 0.92 [0.66–1.17] | - | 0.53 [0.29–0.77] | 0.87 [0.73–1.00] | - | 1.19 [0.94–1.45] | 0.87 [0.70–1.00]] | - |
| Calibration before recal.; intercept | 0.03 [-0.02–0.08] | 0.17 [0.11–0.24] | - | 0.01 [-0.13–0.15] | 0.16 [0.10–0.22] | - | -0.06 [-0.16–0.03] | -0.12 [-0.19- -0.06] | - | 0.02 [-0.04–0.07] | 0.12 [0.07–0.17] | - |
* Information missing.
Dev. = Development, ALC = Absolute lymphocyte count, ANC = Absolute neutrophil count, Crea. = Creatinine, recal. = recalibration.
Univariate analysis of predictors in mild/moderate and severe disease.
| OUH cohort | KCH cohort | |||||||
|---|---|---|---|---|---|---|---|---|
| N | Mild/Moderate disease | Severe disease | P-value | N | Mild/moderate disease | Severe disease | P-value | |
|
| 307 | 55 [46–70] | 68 [58–78] | <0.01 | 1295 | 67 [53–82] | 75 [62–86] | <0.01 |
|
| 307 | 129 (54) | 46 (70) | 0.02 | 1295 | 463 (56) | 271(65) | 0.01 |
|
| 307 | 75 (31) | 29 (44) | 0.05 | 1295 | 428 (52) | 244 (58) | 0.04 |
|
| 307 | 46 (19) | 18 (27) | 0.15 | 1295 | 282 (34) | 154 (37) | 0.40 |
|
| 307 | 20 (8) | 13 (20) | 0.01 | 1295 | 105 (13) | 66 (16) | 0.17 |
|
| 307 | 61 (25) | 22 (33) | 0.19 | 1295 | 82 (10) | 52 (12) | 0.22 |
|
| 307 | 5.0 [2.0–9.0] | 16.5 [8.0–24.0] | <0.01 | 854 | 7.0 [3.0–12.0] | 16.0 [10.5–31.1] | <0.01 |
|
| 306 | 37.1 [36.5–37.8] | 37.8 [36.8–38.8] | <0.01 | 864 | 36.9 [36.6–37.4] | 37.0 [36.6–37.5] | 0.22 |
|
| 303 | 22 [18–28] | 28 [22–32] | <0.01 | 860 | 19 [18–20] | 20 [19–24] | <0.01 |
|
| 299 | 4 [2–6] | 7 [5–10] | <0.01 | 815 | 2 [1–4] | 4 [2–6] | <0.01 |
|
| 307 | 96.0 [93.0–98.0] | 92.0 [87.3–95.0] | <0.01 | 858 | 96.0 [95.0, 98.0] | 96.0 [94.0, 97.0] | <0.01 |
|
| 307 | 34 [10–74] | 93 [45–154] | <0.01 | 1203 | 73 [33–128] | 118 [59–196] | <0.01 |
|
| 307 | 77 [64–94] | 97 [71–128] | <0.01 | 1200 | 87 [69–118] | 108 [83–166] | <0.01 |
|
| 269 | 237 [188–305] | 329 [242–499] | <0.01 | 157 | 349 [277–431] | 532 [393–706] | <0.01 |
|
| 295 | 4.0 [2.0–5.9] | 5.7 [2.8–7.9] | <0.01 | 1186 | 5.1 [3.6–7.2] | 6.4 [4.5–8.8] | <0.01 |
|
| 295 | 1.1 [0.8–1.6] | 0.8 [0.6–1.1] | <0.01 | 1187 | 1.0 [0.7–1.3] | 0.9 [0.6–1.3] | <0.01 |
|
| 307 | 215 [173–279] | 179 [135–244] | <0.01 | 1188 | 214 [165–269] | 205 [153–272] | 0.15 |
Fig 2Discrimination of the models at the different sites.
AUROCs from validation of the four models at the KCH and OUH cohorts, and the original AUROC from development cohorts [21–23]. Also shown are the results from the external validation of the Xie and Zhang models by Gupta et al. [6]. Lines represent the 95% CIs of the AUROCs. For the development cohorts only Xie reported confidence intervals.
Fig 3Calibration plots for OUH and KCH after recalibration.