Literature DB >> 34432272

Experimental MicroRNA Detection Methods.

Bilge Yaylak1, Bünyamin Akgül2.   

Abstract

MicroRNAs (miRNAs) are considerably small yet highly important riboregulators involved in nearly all cellular processes. Due to their critical roles in posttranscriptional regulation of gene expression, they have the potential to be used as biomarkers in addition to their use as drug targets. Although computational approaches speed up the initial genomewide identification of putative miRNAs, experimental approaches are essential for further validation and functional analyses of differentially expressed miRNAs. Therefore, sensitive, specific, and cost-effective microRNA detection methods are imperative for both individual and multiplex analysis of miRNA expression in different tissues and during different developmental stages. There are a number of well-established miRNA detection methods that can be exploited depending on the comprehensiveness of the study (individual miRNA versus multiplex analysis), the availability of the sample and the location and intracellular concentration of miRNAs. This review aims to highlight not only traditional but also novel strategies that are widely used in experimental identification and quantification of microRNAs.
© 2022. Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Detection; Experimental; Quantification; RT-PCR; miRNA; microRNA

Mesh:

Substances:

Year:  2022        PMID: 34432272     DOI: 10.1007/978-1-0716-1170-8_2

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  79 in total

1.  Target-cell-specific delivery, imaging, and detection of intracellular microRNA with a multifunctional SnO2 nanoprobe.

Authors:  Haifeng Dong; Jianping Lei; Huangxian Ju; Feng Zhi; Hua Wang; Wenjie Guo; Zhu Zhu; Feng Yan
Journal:  Angew Chem Int Ed Engl       Date:  2012-03-30       Impact factor: 15.336

Review 2.  The widespread regulation of microRNA biogenesis, function and decay.

Authors:  Jacek Krol; Inga Loedige; Witold Filipowicz
Journal:  Nat Rev Genet       Date:  2010-07-27       Impact factor: 53.242

3.  Hsc70/Hsp90 chaperone machinery mediates ATP-dependent RISC loading of small RNA duplexes.

Authors:  Shintaro Iwasaki; Maki Kobayashi; Mayuko Yoda; Yuriko Sakaguchi; Susumu Katsuma; Tsutomu Suzuki; Yukihide Tomari
Journal:  Mol Cell       Date:  2010-06-03       Impact factor: 17.970

4.  Master regulators of posttranscriptional gene expression are subject to regulation.

Authors:  Syed Muhammad Hamid; Bünyamin Akgül
Journal:  Methods Mol Biol       Date:  2014

Review 5.  Detection methods for microRNAs in clinic practice.

Authors:  Mariàngels de Planell-Saguer; Maria Celina Rodicio
Journal:  Clin Biochem       Date:  2013-03-13       Impact factor: 3.281

6.  A dicer-independent miRNA biogenesis pathway that requires Ago catalysis.

Authors:  Sihem Cheloufi; Camila O Dos Santos; Mark M W Chong; Gregory J Hannon
Journal:  Nature       Date:  2010-06-03       Impact factor: 49.962

7.  Conserved vertebrate mir-451 provides a platform for Dicer-independent, Ago2-mediated microRNA biogenesis.

Authors:  Jr-Shiuan Yang; Thomas Maurin; Nicolas Robine; Kasper D Rasmussen; Kate L Jeffrey; Rohit Chandwani; Eirini P Papapetrou; Michel Sadelain; Dónal O'Carroll; Eric C Lai
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-10       Impact factor: 11.205

8.  Mammalian 5'-capped microRNA precursors that generate a single microRNA.

Authors:  Mingyi Xie; Mingfeng Li; Anna Vilborg; Nara Lee; Mei-Di Shu; Valeria Yartseva; Nenad Šestan; Joan A Steitz
Journal:  Cell       Date:  2013-12-19       Impact factor: 41.582

9.  MicroRNA: Biogenesis, Function and Role in Cancer.

Authors:  Leigh-Ann Macfarlane; Paul R Murphy
Journal:  Curr Genomics       Date:  2010-11       Impact factor: 2.236

Review 10.  Post-transcriptional control of miRNA biogenesis.

Authors:  Gracjan Michlewski; Javier F Cáceres
Journal:  RNA       Date:  2018-10-17       Impact factor: 4.942

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