Literature DB >> 34430541

Genome-wide analysis of hepatitis B virus integration in hepatocellular carcinoma: Insights next generation sequencing.

Yutaka Midorikawa1,2, Kenji Tatsuno1, Mitsuhiko Moriyama3.   

Abstract

Entities:  

Year:  2021        PMID: 34430541      PMCID: PMC8350990          DOI: 10.21037/hbsn-21-228

Source DB:  PubMed          Journal:  Hepatobiliary Surg Nutr        ISSN: 2304-3881            Impact factor:   7.293


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  14 in total

1.  Trans-ancestry mutational landscape of hepatocellular carcinoma genomes.

Authors:  Yasushi Totoki; Kenji Tatsuno; Kyle R Covington; Hiroki Ueda; Chad J Creighton; Mamoru Kato; Shingo Tsuji; Lawrence A Donehower; Betty L Slagle; Hiromi Nakamura; Shogo Yamamoto; Eve Shinbrot; Natsuko Hama; Megan Lehmkuhl; Fumie Hosoda; Yasuhito Arai; Kim Walker; Mahmoud Dahdouli; Kengo Gotoh; Genta Nagae; Marie-Claude Gingras; Donna M Muzny; Hidenori Ojima; Kazuaki Shimada; Yutaka Midorikawa; John A Goss; Ronald Cotton; Akimasa Hayashi; Junji Shibahara; Shumpei Ishikawa; Jacfranz Guiteau; Mariko Tanaka; Tomoko Urushidate; Shoko Ohashi; Naoko Okada; Harsha Doddapaneni; Min Wang; Yiming Zhu; Huyen Dinh; Takuji Okusaka; Norihiro Kokudo; Tomoo Kosuge; Tadatoshi Takayama; Masashi Fukayama; Richard A Gibbs; David A Wheeler; Hiroyuki Aburatani; Tatsuhiro Shibata
Journal:  Nat Genet       Date:  2014-11-02       Impact factor: 38.330

2.  Accumulation of Molecular Aberrations Distinctive to Hepatocellular Carcinoma Progression.

Authors:  Yutaka Midorikawa; Shogo Yamamoto; Kenji Tatsuno; Claire Renard-Guillet; Shingo Tsuji; Akimasa Hayashi; Hiroki Ueda; Shiro Fukuda; Takanori Fujita; Hiroto Katoh; Shumpei Ishikawa; Kyle R Covington; Chad J Creighton; Masahiko Sugitani; David A Wheeler; Tatsuhiro Shibata; Genta Nagae; Tadatoshi Takayama; Hiroyuki Aburatani
Journal:  Cancer Res       Date:  2020-07-08       Impact factor: 12.701

3.  HIVID: an efficient method to detect HBV integration using low coverage sequencing.

Authors:  Weiyang Li; Xi Zeng; Nikki P Lee; Xiao Liu; Shengpei Chen; Bing Guo; Shang Yi; Xuehan Zhuang; Fang Chen; Guan Wang; Ronnie T Poon; Sheung Tat Fan; Mao Mao; Yingrui Li; Songgang Li; Jun Wang; Xun Xu; Hui Jiang; Xiuqing Zhang
Journal:  Genomics       Date:  2013-07-15       Impact factor: 5.736

4.  Recurrent AAV2-related insertional mutagenesis in human hepatocellular carcinomas.

Authors:  Jean-Charles Nault; Shalini Datta; Sandrine Imbeaud; Andrea Franconi; Maxime Mallet; Gabrielle Couchy; Eric Letouzé; Camilla Pilati; Benjamin Verret; Jean-Frédéric Blanc; Charles Balabaud; Julien Calderaro; Alexis Laurent; Mélanie Letexier; Paulette Bioulac-Sage; Fabien Calvo; Jessica Zucman-Rossi
Journal:  Nat Genet       Date:  2015-08-24       Impact factor: 38.330

5.  A genome-wide analysis of common fragile sites: what features determine chromosomal instability in the human genome?

Authors:  Arkarachai Fungtammasan; Erin Walsh; Francesca Chiaromonte; Kristin A Eckert; Kateryna D Makova
Journal:  Genome Res       Date:  2012-03-28       Impact factor: 9.043

6.  Integrated analysis of whole genome and transcriptome sequencing reveals diverse transcriptomic aberrations driven by somatic genomic changes in liver cancers.

Authors:  Yuichi Shiraishi; Akihiro Fujimoto; Mayuko Furuta; Hiroko Tanaka; Ken-ichi Chiba; Keith A Boroevich; Tetsuo Abe; Yoshiiku Kawakami; Masaki Ueno; Kunihito Gotoh; Shun-ichi Ariizumi; Tetsuo Shibuya; Kaoru Nakano; Aya Sasaki; Kazuhiro Maejima; Rina Kitada; Shinya Hayami; Yoshinobu Shigekawa; Shigeru Marubashi; Terumasa Yamada; Michiaki Kubo; Osamu Ishikawa; Hiroshi Aikata; Koji Arihiro; Hideki Ohdan; Masakazu Yamamoto; Hiroki Yamaue; Kazuaki Chayama; Tatsuhiko Tsunoda; Satoru Miyano; Hidewaki Nakagawa
Journal:  PLoS One       Date:  2014-12-19       Impact factor: 3.240

7.  Genomic and oncogenic preference of HBV integration in hepatocellular carcinoma.

Authors:  Ling-Hao Zhao; Xiao Liu; He-Xin Yan; Wei-Yang Li; Xi Zeng; Yuan Yang; Jie Zhao; Shi-Ping Liu; Xue-Han Zhuang; Chuan Lin; Chen-Jie Qin; Yi Zhao; Ze-Ya Pan; Gang Huang; Hui Liu; Jin Zhang; Ruo-Yu Wang; Yun Yang; Wen Wen; Gui-Shuai Lv; Hui-Lu Zhang; Han Wu; Shuai Huang; Ming-Da Wang; Liang Tang; Hong-Zhi Cao; Ling Wang; Tin-Lap Lee; Hui Jiang; Ye-Xiong Tan; Sheng-Xian Yuan; Guo-Jun Hou; Qi-Fei Tao; Qin-Guo Xu; Xiu-Qing Zhang; Meng-Chao Wu; Xun Xu; Jun Wang; Huan-Ming Yang; Wei-Ping Zhou; Hong-Yang Wang
Journal:  Nat Commun       Date:  2016-10-05       Impact factor: 14.919

Review 8.  HBV DNA Integration: Molecular Mechanisms and Clinical Implications.

Authors:  Thomas Tu; Magdalena A Budzinska; Nicholas A Shackel; Stephan Urban
Journal:  Viruses       Date:  2017-04-10       Impact factor: 5.048

9.  Characterization of HBV integration patterns and timing in liver cancer and HBV-infected livers.

Authors:  Mayuko Furuta; Hiroko Tanaka; Yuichi Shiraishi; Takuro Unida; Michio Imamura; Akihiro Fujimoto; Masahi Fujita; Aya Sasaki-Oku; Kazuhiro Maejima; Kaoru Nakano; Yoshiiku Kawakami; Koji Arihiro; Hiroshi Aikata; Masaki Ueno; Shinya Hayami; Shun-Ichi Ariizumi; Masakazu Yamamoto; Kunihito Gotoh; Hideki Ohdan; Hiroki Yamaue; Satoru Miyano; Kazuaki Chayama; Hidewaki Nakagawa
Journal:  Oncotarget       Date:  2018-05-18

10.  Hepatitis B virus integrations promote local and distant oncogenic driver alterations in hepatocellular carcinoma.

Authors:  Camille Péneau; Sandrine Imbeaud; Tiziana La Bella; Theo Z Hirsch; Stefano Caruso; Julien Calderaro; Valerie Paradis; Jean-Frederic Blanc; Eric Letouzé; Jean-Charles Nault; Giuliana Amaddeo; Jessica Zucman-Rossi
Journal:  Gut       Date:  2021-02-09       Impact factor: 23.059

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