Literature DB >> 34427740

A novel tandem duplication of PRDM13 in a Chinese family with North Carolina macular dystrophy.

Shijing Wu1, Zhisheng Yuan1, Zixi Sun1, Tian Zhu1, Xing Wei1, Xuan Zou1, Ruifang Sui2.   

Abstract

PURPOSES: North Carolina macular dystrophy (NCMD) is a rare autosomal dominant inherited disorder characterized by macular impairment with a variety of phenotypic manifestations. The aims of this study were to assess the clinical features of a Chinese family with NCMD and to identify the underlying genetic cause of the disease.
METHODS: Three patients from a Chinese family were included in this study. Detailed ophthalmological examinations were performed, including best corrected visual acuity (BCVA), slit lamp, dilated indirect ophthalmoscopy, fundus photography, optical coherence tomography (OCT), fundus autofluorescence, full-field electroretinography (ERG), and electrooculography (EOG). Genomic DNA was extracted from peripheral blood samples. Whole-genome sequencing and long-read genome sequencing were applied to detect the pathogenic variants. Sanger sequencing was performed to confirm the breakpoints.
RESULTS: All three patients had macular involvement ranging from patchy yellowish-white lesions to big-area thinning, which are typical for NCMD. The BCVA ranged from 20/50 to 20/20. OCT revealed varying degrees of macular structure disorganization. The ERG responses were normal, and the Arden ration of the EOG was reduced. A novel 134.6 kb (g.99932464-100067110dup) tandem duplication on chromosome 6 (NC_000006.11) encompassing the entire CCNC and PRDM13 genes and a DNase 1 hypersensitivity site in the MCDR1 locus was identified.
CONCLUSION: A novel large tandem duplication in MCDR1 locus was confirmed in a Chinese family with NCMD with a variety of macular phenotypes.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Long-read genome sequencing; North Carolina macular dystrophy; Tandem duplication; Whole-genome sequencing

Mesh:

Year:  2021        PMID: 34427740     DOI: 10.1007/s00417-021-05376-w

Source DB:  PubMed          Journal:  Graefes Arch Clin Exp Ophthalmol        ISSN: 0721-832X            Impact factor:   3.117


  35 in total

1.  North Carolina macular dystrophy phenotype in France maps to the MCDR1 locus.

Authors:  K W Small; B Puech; L Mullen; S Yelchits
Journal:  Mol Vis       Date:  1997-01-02       Impact factor: 2.367

2.  North Carolina macular dystrophy is assigned to chromosome 6.

Authors:  K W Small; J L Weber; A Roses; F Lennon; J M Vance; M A Pericak-Vance
Journal:  Genomics       Date:  1992-07       Impact factor: 5.736

3.  Thirty-Year follow-up of an African American family with macular dystrophy of the retina, locus 1 (North Carolina macular dystrophy).

Authors:  Daniel F Kiernan; Rohan J Shah; Seenu M Hariprasad; Michael A Grassi; Kent W Small; Joseph P Kiernan; William F Mieler
Journal:  Ophthalmology       Date:  2011-02-18       Impact factor: 12.079

4.  North Carolina macular dystrophy, revisited.

Authors:  K W Small
Journal:  Ophthalmology       Date:  1989-12       Impact factor: 12.079

5.  Phenotype of a British North Carolina macular dystrophy family linked to chromosome 6q.

Authors:  M B Reichel; R E Kelsell; J Fan; C Y Gregory; K Evans; A T Moore; D M Hunt; F W Fitzke; A C Bird
Journal:  Br J Ophthalmol       Date:  1998-10       Impact factor: 4.638

6.  A novel duplication of PRMD13 causes North Carolina macular dystrophy: overexpression of PRDM13 orthologue in drosophila eye reproduces the human phenotype.

Authors:  Gaël Manes; Willy Joly; Thomas Guignard; Vasily Smirnov; Sylvie Berthemy; Béatrice Bocquet; Isabelle Audo; Christina Zeitz; José Sahel; Chantal Cazevieille; Audrey Sénéchal; Jean-François Deleuze; Hélène Blanché-Koch; Anne Boland; Patrick Carroll; David Geneviève; Xavier Zanlonghi; Carl Arndt; Christian P Hamel; Sabine Defoort-Dhellemmes; Isabelle Meunier
Journal:  Hum Mol Genet       Date:  2017-11-15       Impact factor: 6.150

7.  North Carolina Macular Dystrophy Is Caused by Dysregulation of the Retinal Transcription Factor PRDM13.

Authors:  Kent W Small; Adam P DeLuca; S Scott Whitmore; Thomas Rosenberg; Rosemary Silva-Garcia; Nitin Udar; Bernard Puech; Charles A Garcia; Thomas A Rice; Gerald A Fishman; Elise Héon; James C Folk; Luan M Streb; Christine M Haas; Luke A Wiley; Todd E Scheetz; John H Fingert; Robert F Mullins; Budd A Tucker; Edwin M Stone
Journal:  Ophthalmology       Date:  2015-10-24       Impact factor: 12.079

8.  Clinical and genetic characterization of a Danish family with North Carolina macular dystrophy.

Authors:  Thomas Rosenberg; Ben Roos; Thorkild Johnsen; Niels Bech; Todd E Scheetz; Michael Larsen; Edwin M Stone; John H Fingert
Journal:  Mol Vis       Date:  2010-12-09       Impact factor: 2.367

9.  North Carolina macular dystrophy (MCDR1) caused by a novel tandem duplication of the PRDM13 gene.

Authors:  Sara J Bowne; Lori S Sullivan; Dianna K Wheaton; Kirsten G Locke; Kaylie D Jones; Daniel C Koboldt; Robert S Fulton; Richard K Wilson; Susan H Blanton; David G Birch; Stephen P Daiger
Journal:  Mol Vis       Date:  2016-10-17       Impact factor: 2.367

10.  Case report: North Carolina macular dystrophy misdiagnosed as congenital ocular toxoplasmosis.

Authors:  Moktika Tandon; Christopher Barnett; Deepa Taranath
Journal:  Mol Vis       Date:  2019-11-14       Impact factor: 2.367

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