Literature DB >> 34423102

First report of Cucumber mosaic virus infecting Ocimum gratissimum (L.) in Calabar, Cross River State, Nigeria.

E E Ekpiken1, O I Eyong2, A A J Mofunanya3, A T Owolabi3, O Arogundade4.   

Abstract

Leaf samples of Ocimum gratissimum (L.) exhibiting vein banding, mosaic and chlorotic spots were collected randomly from the field. The symptomatic samples reacted positively to specific CMV antibody in antigen coated plate enzyme linked immunosorbent assay and to confirm the presence of CMV, RT-PCR was performed using CMV-specific primers that amplify a 519 bp region from the viral coat protein gene. The expected amplicon shared homology of 97.06% with a Nigerian isolate MH178110. Phylogenetic tree constructed revealed the isolate in close association with CMV strains belonging to subgroup II. This is the first molecular evidence of CMV in O. gratissimum in Nigeria and adds to the list of natural host for the virus. © Indian Virological Society 2021.

Entities:  

Keywords:  ACP-ELISA; CMV; Nigerian isolate; Ocimum gratissimum

Year:  2021        PMID: 34423102      PMCID: PMC8324618          DOI: 10.1007/s13337-021-00662-x

Source DB:  PubMed          Journal:  Virusdisease        ISSN: 2347-3584


  2 in total

1.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

Authors:  Koichiro Tamura; Glen Stecher; Daniel Peterson; Alan Filipski; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2013-10-16       Impact factor: 16.240

2.  Optimization of diagnostic RT-PCR protocols and sampling procedures for the reliable and cost-effective detection of Cassava brown streak virus.

Authors:  M M Abarshi; I U Mohammed; P Wasswa; R J Hillocks; J Holt; J P Legg; S E Seal; M N Maruthi
Journal:  J Virol Methods       Date:  2009-10-29       Impact factor: 2.014

  2 in total
  1 in total

1.  Genetic Structure of Cucumber Mosaic Virus From Natural Hosts in Nigeria Reveals High Diversity and Occurrence of Putative Novel Recombinant Strains.

Authors:  Oluropo A Apalowo; Adedapo O Adediji; Olusegun S Balogun; Temitope I Fakolujo; Joy M Archibong; Nkechi B Izuogu; Mohamed A Abdelgawad; Mohammed M Ghoneim; Suleiman Mustapha; Fadi S I Qashqari; Gaber E Batiha; Gabriel I Atiri
Journal:  Front Microbiol       Date:  2022-02-10       Impact factor: 5.640

  1 in total

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