| Literature DB >> 34422633 |
Xiao-Xiong Gan1, Ya-Yi Li1, Si-Jin Li1, Shi-Sen Mo2, Jian-Hua Feng1, Fei Shen1, Wen-Song Cai1, Ye-Qian Lai3, Bo Xu1.
Abstract
BACKGROUND: Papillary thyroid carcinoma (PTC) concurrent with Hashimoto's thyroiditis (HT) was associated with a better clinical prognosis. This study aimed to investigate a potential mRNA gene that affects the development of PTC, which helps PTC concurrent with HT patients have a better prognosis. MATERIAL/Entities:
Keywords: Hashimoto’s thyroiditis; immune gene; papillary thyroid carcinoma; prognosis; tumor microenvironment
Year: 2021 PMID: 34422633 PMCID: PMC8372325 DOI: 10.3389/fonc.2021.680873
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244
Relationship between HT and clinicopathological parameters.
| Patients’ parameters | Total (PTC) | Non-HT(268) | HT(42) | Odds ratio (95%CI) | ||
|---|---|---|---|---|---|---|
|
| ||||||
| <55 | 223 | 190 | 33 | 1 | 0.303 | |
| ≥55 | 87 | 78 | 9 | 0.664(0.304-1.453) | ||
|
| ||||||
| Women | 208 | 198 | 10 | 1 | <0.001* | |
| Men | 102 | 70 | 32 | 1.131(0.529-2.420) | ||
|
| ||||||
| White | 221 | 192 | 29 | 1 | 0.297 | |
| Asian | 29 | 26 | 3 | 0.151(0.077-0.295) | ||
| Black | 18 | 18 | 0 | 1.094(1.049-1.140) | ||
|
| ||||||
| Unifocality | 185 | 167 | 18 | 1 | 0.007* | |
| Multifocality | 123 | 100 | 23 | 2.453(1.265-4.758) | ||
|
| ||||||
| CPTC | 235 | 204 | 31 | 1 | 0.071 | |
| FVPTC | 53 | 42 | 11 | 1.724(0.803-3.699) | ||
| TCPTC | 22 | 22 | 0 | 1.108(1.061-1.156) | ||
|
| ||||||
| No | 203 | 166 | 37 | 1 | 0.001* | |
| Yes | 102 | 98 | 4 | 0.183(0.063-0.529) | ||
|
| ||||||
| No | 246 | 210 | 36 | 1 | 0.045* | |
| Yes | 37 | 36 | 1 | 0.162(0.022-1.219) | ||
|
| ||||||
| No | 283 | 243 | 40 | 1 | 0.554 | |
| Yes | 27 | 25 | 2 | 0.486(0.111-2.132) | ||
|
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| No | 296 | 254 | 42 | 1 | 1.000 | |
| Yes | 14 | 14 | 0 | 0.827(0.181-3.769) | ||
|
| ||||||
| 1 | 78 | 63 | 15 | 1 | 0.006* | |
| 2 | 112 | 91 | 21 | 0.969(0.464-2.024) | ||
| 3 | 102 | 96 | 6 | 0.262(0.097-0.713) | ||
| 4 | 18 | 18 | 0 | 1.286(1.144-1.444) | ||
|
| ||||||
| 0 | 127 | 103 | 24 | 1 | 0.101 | |
| 1 | 152 | 134 | 18 | 0.576(0.297-1.119) | ||
|
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| M0 | 186 | 155 | 31 | 1 | 1.000 | |
| M1 | 13 | 11 | 2 | 0.909(0.192-4.305) | ||
|
| ||||||
| I | 247 | 214 | 33 | 1 | 0.126 | |
| II | 48 | 41 | 7 | 1.107(0.459-2.673) | ||
| III | 11 | 11 | 0 | 1.051(1.021-1.083) | ||
| IV | 4 | 2 | 2 | 1.179(0.250-5.558) | ||
HT, Hashimoto’s thyroiditis; PTC, papillary thyroid cancer; CPTC, conventional papillary thyroid cancer; FVPTC, follicular variant papillary thyroid cancer; TCPTC, tall cell variant papillary thyroid cancer; ETE, extrathyroidal extension; T, tumor size; N, lymph node; M, metastasis; AJCC, 8th edition American Joint Committee on Cancer staging. *P < 0.05; CI, confidence intervals.
Figure 1The Kaplan–Meier survival analysis of RFS (A) and OS (B), between the HT and the non-HT groups.
Figure 2Heatmap analysis (A) and a volcano plot (B) of differentially expressed mRNAs. The gene expression pattern depends on the differentially expressed mRNAs. Supervised clustering of papillary thyroid carcinomas (PTCs) did exhibit a significant clustering effect between the PTC-HT group and the non-HT group. Each cell in the matrix represents the expression level of a gene feature in an individual pattern. Red or green color reflects a relative upregulation or downregulation, respectively, as indicated in the scale bar.
The top 10 upregulated and downregulated differentially expressed mRNAs.
| Gene symbol | LogFC | FDR | Change |
|---|---|---|---|
| ONECUT2 | 2.846598178 | 4.00E-37 | Up |
| AKR1C2 | 3.003495786 | 3.94E-33 | Up |
| PTH2R | 3.009139202 | 2.19E-31 | Up |
| SFTPA2 | 4.127557267 | 3.07E-23 | Up |
| VGF | 3.699246144 | 1.10E-19 | Up |
| VIL1 | 2.868695432 | 2.25E-18 | Up |
| HMP19 | 2.425403134 | 1.64E-16 | Up |
| NTRK1 | 3.413005 | 7.53E-16 | Up |
| HP | 3.035935495 | 5.81E-13 | Up |
| SAA1 | 2.786086348 | 4.95E-12 | Up |
| MATN1 | -5.005607624 | 3.08E-09 | Down |
| ACTA1 | -4.564569023 | 4.18E-08 | Down |
| GDF6 | -4.817671822 | 8.32E-08 | Down |
| MYBPC1 | -4.171266076 | 1.68E-07 | Down |
| CKM | -5.067448813 | 3.43E-07 | Down |
| NKAIN1 | -4.1177435 | 9.82E-07 | Down |
| LHX2 | -4.803160418 | 1.85E-06 | Down |
| ACTN2 | -3.692894621 | 2.17E-06 | Down |
| KIRREL3 | -3.522301643 | 3.24E-06 | Down |
| MYH7 | -5.033045481 | 3.25E-06 | Down |
FC, fold change; FDR, false discovery rate.
Figure 3Prognostic significance of differentially expressed mRNAs. (A) CLEC4M; (B) DMBT1; (C) HMP19; (D) IHH; (E) MSLN; (F) NWD2; (G) SALL3; (H) BPIFB1; (I) C10or71; (J) MYL2; (K) MYOG; (L) NKAIN1; (M) PTH2R.
Figure 4Expression levels of mRNA in HT and non-HT groups. (A) CLEC4M; (B) DMBT1; (C) HMP19; (D) IHH; (E) MSLN; (F) NWD2; (G) SALL3; (H) BPIFB1; (I) C10or71; (J) MYL2; (K) MYOG; (L) NKAIN1; (M) PTH2R.
Figure 5The validation of DMBT1 by the data of in situ hybridization. (A) PTC concurrent with non-HT. (B) PTC concurrent with HT. (C) The expression level of the non-HT group vs. HT group. (D) The expression level of the non-HT group vs. HT group (TPOAb>100 IU/ml).
The validation of DMBT1 by the data of in situ hybridization.
| Expression of DMBT1 | Non-HT | HT | HT (TPOAb>100 IU/ml) | |||
|---|---|---|---|---|---|---|
|
| 14 | 17 | 0.5626 | 10 | 0.0427 | |
|
| 10 | 7 | 5 | |||
|
| 2 | 1 | 1 | |||
|
| 2 | 1 | 0 | |||
HT, Hashimoto’s thyroiditis. The P value was the result of numerical variables by T test.
Relationship between the expression levels of DMBT1 and clinicopathological parameters.
| Patients’ parameters | Total | Expression of DMBT1 | P value |
|---|---|---|---|
|
| |||
| <55 | 223 | 72.82 | 0.887 |
| ≥55 | 87 | 67.17 | |
|
| |||
| Women | 230 | 76.58 | 0.613 |
| Men | 80 | 55.86 | |
|
| |||
| White | 221 | 76.47 | 0.121 |
| Asian | 29 | 55 | |
| Black | 18 | 80.83 | |
|
| |||
| Unifocality | 185 | 52.3 | 0.198 |
| Multifocality | 123 | 99.25 | |
|
| |||
| CPTC | 235 | 86.02 | 0.143 |
| FVPTC+TCPTC | 75 | 24.88 | |
|
| |||
| No | 116 | 43.87 | 0.179 |
| Yes | 125 | 103.6 | |
|
| |||
| No | 203 | 79.11 | 0.045* |
| Yes | 102 | 58.56 | |
|
| |||
| No | 246 | 73.95 | 0.786 |
| Yes | 37 | 58.3 | |
|
| |||
| No | 283 | 74.28 | 0.023* |
| Yes | 27 | 39.26 | |
|
| |||
| No | 296 | 72.04 | 0.836 |
| Yes | 14 | 54.14 | |
|
| |||
| I-II | 190 | 86.25 | 0.291 |
| III-IV | 120 | 47.46 | |
|
| |||
| 0 | 127 | 91.63 | 0.008* |
| 1 | 152 | 52.01 | |
|
| |||
| M0 | 186 | 77.62 | 0.773 |
| M1 | 13 | 109.2 | |
|
| |||
| I-II | 295 | 145.12 | <0.001* |
| III-IV | 15 | 74.13 |
CPTC, conventional papillary thyroid cancer; FVPTC, follicular variant papillary thyroid cancer; TCPTC, tall cell variant papillary thyroid cancer; ETE, extrathyroidal extension; T, tumor size; N, lymph node; M, metastasis; AJCC, 8th edition American Joint Committee on Cancer staging. *P < 0.05.
Cox multivariate regression analyses of factors associated with recurrence (and survival).
| Clinicopathologic features | RFS | OS | ||
|---|---|---|---|---|
| HR (95% CI) | P | HR (95% CI) | P | |
| HT | 0.563 (0.058-5.490) | 0.621 | 0.042 (0.000-77.786) | 0.408 |
| Age (≥55) | 0.669 (0.139-3.230) | 0.617 | 312.767 (1.034-94582.626) | 0.049* |
| DMBT1 (high) | 0.947 (0.327-2.741) | 0.043* | 0.903 (0.202-4.040) | 0.032* |
| Male sex | 0.402 (0.065-2.479) | 0.326 | 1.899 (0.635-5.682) | 0.251 |
| Ethnicity category (non-White) | 1.492 (0.489-4.552) | 0.482 | 0.119 (0.002-8.878) | 0.333 |
| Multifocality | 1.837 (0.408-8.264) | 0.428 | 0.169 (0.022-1.301) | 0.088 |
| ETE | 0.437 (0.043-4.408) | 0.482 | 1.803 (0.621-5.230) | 0.278 |
| Histology (non-CPTC) | 1.416 (0.479-4.191) | 0.529 | 0.392 (0.060-2.575) | 0.329 |
| Residual tumor | 2.158 (0.338-13.787) | 0.416 | 3.516 (1.022-12.100) | 0.046* |
| T stage | 3.262 (0.625-17.032) | 0.161 | 2.751 (1.400-5.406) | 0.003* |
| N stage | 2.559 (1.015-6.450) | 0.046* | 2.269 (0.601-8.559) | 0.227 |
| M stage | 1.500 (0.196-11.478) | 0.696 | – | 0.735 |
| AJCC stage | 2.123 (0.525-8.581) | 0.291 | 0.871 (0.305-2.485) | 0.797 |
HR, hazard ratios; CI, confidence intervals; RFS, recurrence-free survival; OS, overall survival; ETE, extrathyroidal extension; CPTC, conventional papillary thyroid cancer; T, tumor size; N, lymph node; M, metastasis; AJCC, 8th edition American Joint Committee on Cancer staging. *P < 0.05.
Figure 6The immune-related analysis of the high expression and low expression of DMBT1 was analyzed by ssGSEA and ESTIMATE methods. (A). The heatmap of overall immune status and tumor purity in high-expression versus low-expression DMBT1 groups. (B). HLA gene expression profiles in high-expression versus low-expression DMBT1 groups. (C). Gene Ontology (GO)-enriched pathways of patients with high TIM risk scores. (D). The Kyoto Encyclopedia of Genes and Genomes (KEGG)-enriched pathways of patients with high TIM risk scores. (E). GO functional annotation pathway enrichments in high-expression versus low-expression DMBT1 groups. (F). KEGG pathway enrichments in high-expression versus low-expression DMBT1 groups. (*P < 0.05, ***P < 0.001, ns P > 0.05).
Figure 7Gene expression analysis of key prognosis gene checkpoint in high-expression versus low-expression DMBT1 groups. (A) BRAF; (B) CD70; (C) CTLA-4; (D) IDO1; (E) KRAS; (F) NRAS; (G) PDL-1; (H) RET; (I) TERT; (J) TP53. (*P < 0.05, ***P < 0.001, ns P > 0.05).