Literature DB >> 34417290

Topological braiding and virtual particles on the cell membrane.

Jinghui Liu1, Jan F Totz2,3, Pearson W Miller4, Alasdair D Hastewell2, Yu-Chen Chao1,5, Jörn Dunkel6, Nikta Fakhri7.   

Abstract

Braiding of topological structures in complex matter fields provides a robust framework for encoding and processing information, and it has been extensively studied in the context of topological quantum computation. In living systems, topological defects are crucial for the localization and organization of biochemical signaling waves, but their braiding dynamics remain unexplored. Here, we show that the spiral wave cores, which organize the Rho-GTP protein signaling dynamics and force generation on the membrane of starfish egg cells, undergo spontaneous braiding dynamics. Experimentally measured world line braiding exponents and topological entropy correlate with cellular activity and agree with predictions from a generic field theory. Our analysis further reveals the creation and annihilation of virtual quasi-particle excitations during defect scattering events, suggesting phenomenological parallels between quantum and living matter.

Entities:  

Keywords:  biochemical signaling waves; braiding; information transport; topological defects; virtual particles

Mesh:

Substances:

Year:  2021        PMID: 34417290      PMCID: PMC8403925          DOI: 10.1073/pnas.2104191118

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

1.  Spiral calcium wave propagation and annihilation in Xenopus laevis oocytes.

Authors:  J Lechleiter; S Girard; E Peralta; D Clapham
Journal:  Science       Date:  1991-04-05       Impact factor: 47.728

2.  An autoregulatory circuit for long-range self-organization in Dictyostelium cell populations.

Authors:  Satoshi Sawai; Peter A Thomason; Edward C Cox
Journal:  Nature       Date:  2005-01-20       Impact factor: 49.962

3.  Topological defects control collective dynamics in neural progenitor cell cultures.

Authors:  Kyogo Kawaguchi; Ryoichiro Kageyama; Masaki Sano
Journal:  Nature       Date:  2017-04-12       Impact factor: 49.962

4.  Defect-Mediated Morphologies in Growing Cell Colonies.

Authors:  Amin Doostmohammadi; Sumesh P Thampi; Julia M Yeomans
Journal:  Phys Rev Lett       Date:  2016-07-20       Impact factor: 9.161

5.  Fractional statistics in anyon collisions.

Authors:  H Bartolomei; M Kumar; R Bisognin; A Marguerite; J-M Berroir; E Bocquillon; B Plaçais; A Cavanna; Q Dong; U Gennser; Y Jin; G Fève
Journal:  Science       Date:  2020-04-10       Impact factor: 47.728

6.  Electromechanical vortex filaments during cardiac fibrillation.

Authors:  J Christoph; M Chebbok; C Richter; J Schröder-Schetelig; P Bittihn; S Stein; I Uzelac; F H Fenton; G Hasenfuß; R F Gilmour; S Luther
Journal:  Nature       Date:  2018-02-21       Impact factor: 49.962

Review 7.  The Min-protein oscillations in Escherichia coli: an example of self-organized cellular protein waves.

Authors:  Lukas Wettmann; Karsten Kruse
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-05-26       Impact factor: 6.237

8.  Spiral wave dynamics in neocortex.

Authors:  Xiaoying Huang; Weifeng Xu; Jianmin Liang; Kentaroh Takagaki; Xin Gao; Jian-Young Wu
Journal:  Neuron       Date:  2010-12-09       Impact factor: 17.173

9.  Optical control of excitation waves in cardiac tissue.

Authors:  Rebecca A B Burton; Aleksandra Klimas; Christina M Ambrosi; Jakub Tomek; Alex Corbett; Emilia Entcheva; Gil Bub
Journal:  Nat Photonics       Date:  2015-10-19       Impact factor: 38.771

10.  Activator-inhibitor coupling between Rho signalling and actin assembly makes the cell cortex an excitable medium.

Authors:  William M Bement; Marcin Leda; Alison M Moe; Angela M Kita; Matthew E Larson; Adriana E Golding; Courtney Pfeuti; Kuan-Chung Su; Ann L Miller; Andrew B Goryachev; George von Dassow
Journal:  Nat Cell Biol       Date:  2015-10-19       Impact factor: 28.824

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  1 in total

1.  Rotor Localization and Phase Mapping of Cardiac Excitation Waves Using Deep Neural Networks.

Authors:  Jan Lebert; Namita Ravi; Flavio H Fenton; Jan Christoph
Journal:  Front Physiol       Date:  2021-12-17       Impact factor: 4.566

  1 in total

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