Andrew D Kerkhoff1, Adithya Cattamanchi2, Monde Muyoyeta3, Claudia M Denkinger4, David W Dowdy5. 1. Division of HIV, Infectious Diseases and Global Medicine, Zuckerberg San Francisco General Hospital and Trauma Center, University of California San Francisco, San Francisco, CA 94110, USA. Electronic address: andrew.kerkhoff@ucsf.edu. 2. Center for Tuberculosis and Division of Pulmonary and Critical Care Medicine, Zuckerberg San Francisco General Hospital and Trauma Center, University of California San Francisco, San Francisco, CA 94110, USA; Uganda Tuberculosis Implementation Research Consortium, Makerere University, Kampala, Uganda. 3. TB Department, Centre for Infectious Disease Research in Zambia, Lusaka, Zambia. 4. Division of Tropical Medicine, Center of Infectious Diseases, University of Heidelberg, Heidelberg, Germany. 5. Uganda Tuberculosis Implementation Research Consortium, Makerere University, Kampala, Uganda; Department of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA.
Simon Mendelsohn and colleagues (June, 2021)[1] evaluated the diagnostic and prognostic accuracy of a blood transcriptomic signature (RISK11) for prevalent active tuberculosis and incipient tuberculosis among people living with HIV in five South African communities. The development and validation of novel triage tests, such as RISK11, represents a crucial step towards closing gaps in tuberculosis diagnosis and prevention.Although assays utilising transcriptomic signatures hold exciting promise, we must not lose sight of simpler diagnostic approaches, including presenting history and readily available biomarkers, such as C-reactive protein (CRP), which is available in a lateral flow, point-of-care format. For example, against a reference standard of a single positive sputum culture for the identification of prevalent tuberculosis, RISK11’s accuracy among people with HIV (area under the receiver operating characteristic curve [AUC] 80·3%, 95% CI 71·4–88·2)[1] was similar to that of CRP concentrations (AUC 82%)[2] and a simple clinical risk score assessing six patient characteristics (AUC 75%, 95% CI 69–80)[3] in the general population. Although these simpler diagnostic approaches have not been validated in the prediction of incident tuberculosis, their prognostic performance might also compare to that of RISK11 (as people with prevalent and incident tuberculosis share many characteristics).We do not wish to discount the tremendous potential of transcriptomic signatures, but rather wish to highlight the importance of rigorously evaluating simpler diagnostic approaches—independently, compared against, and in combination with more advanced tools such as RISK11. Future studies could evaluate novel candidate tuberculosis triage tests alongside clinical characteristics (eg, simple risk scores) and biomarkers (eg, CRP concentrations), thereby facilitating comparisons against the actual data likely to be available to treating clinicians, and not against a hypothetical threshold based on target product profiles. Furthermore, investigators could consider the explicit synthesis—through stratification, multivariable analyses, or both—of clinical data and existing biomarkers with emerging tools, because the combined diagnostic and prognostic performance (eg, of RISK11, CD4 cell count, and clinical characteristics) might be substantially greater. The utility of such diagnostic combination approaches is well described.[2,4,5] Such analyses might require larger sample sizes and thus collaborative efforts across cohorts. However, using existing (ie, clinical, biomarker, and transcriptomic) data in combination might be simpler, more cost-effective, and more accurate than developing additional tools.In conclusion, we are excited by the increased attention being paid to the tuberculosis diagnostic pipeline. However, it is also important to evaluate emerging diagnostic tools for tuberculosis against clinical characteristics and available biomarkers, and to identify opportunities for synergy between clinical characteristics, available biomarkers, and emerging tools to optimise tuberculosis risk prediction.
Authors: Simon C Mendelsohn; Andrew Fiore-Gartland; Adam Penn-Nicholson; Humphrey Mulenga; Stanley Kimbung Mbandi; Bhavesh Borate; Katie Hadley; Chris Hikuam; Munyaradzi Musvosvi; Nicole Bilek; Mzwandile Erasmus; Lungisa Jaxa; Rodney Raphela; Onke Nombida; Masooda Kaskar; Tom Sumner; Richard G White; Craig Innes; William Brumskine; Andriëtte Hiemstra; Stephanus T Malherbe; Razia Hassan-Moosa; Michèle Tameris; Gerhard Walzl; Kogieleum Naidoo; Gavin Churchyard; Thomas J Scriba; Mark Hatherill Journal: Lancet Glob Health Date: 2021-04-13 Impact factor: 38.927
Authors: Ashar Dhana; Yohhei Hamada; Andre P Kengne; Andrew D Kerkhoff; Molebogeng X Rangaka; Tamara Kredo; Annabel Baddeley; Cecily Miller; Satvinder Singh; Yasmeen Hanifa; Alison D Grant; Katherine Fielding; Dissou Affolabi; Corinne S Merle; Ablo Prudence Wachinou; Christina Yoon; Adithya Cattamanchi; Christopher J Hoffmann; Neil Martinson; Eyongetah Tabenyang Mbu; Melissa S Sander; Taye T Balcha; Sten Skogmar; Byron W P Reeve; Grant Theron; Gcobisa Ndlangalavu; Surbhi Modi; Joseph Cavanaugh; Susan Swindells; Richard E Chaisson; Faiz Ahmad Khan; Andrea A Howard; Robin Wood; Swe Swe Thit; Mar Mar Kyi; Josh Hanson; Paul K Drain; Adrienne E Shapiro; Tendesayi Kufa; Gavin Churchyard; Duc T Nguyen; Edward A Graviss; Stephanie Bjerrum; Isik S Johansen; Jill K Gersh; David J Horne; Sylvia M LaCourse; Haider Abdulrazzaq Abed Al-Darraji; Adeeba Kamarulzaman; Russell R Kempker; Nestani Tukvadze; David A Barr; Graeme Meintjes; Gary Maartens Journal: Lancet Infect Dis Date: 2021-11-17 Impact factor: 71.421
Authors: Yeonsoo Baik; Hannah M Rickman; Colleen F Hanrahan; Lesego Mmolawa; Peter J Kitonsa; Tsundzukana Sewelana; Annet Nalutaaya; Emily A Kendall; Limakatso Lebina; Neil Martinson; Achilles Katamba; David W Dowdy Journal: PLoS Med Date: 2020-11-10 Impact factor: 11.069
Authors: Stuart J Patterson; Charlene Clarke; Tim H Clutton-Brock; Michele A Miller; Sven D C Parsons; Dirk U Pfeiffer; Timothée Vergne; Julian A Drewe Journal: Animals (Basel) Date: 2021-12-04 Impact factor: 3.231
Authors: Simon C Mendelsohn; Andrew Fiore-Gartland; Denis Awany; Humphrey Mulenga; Stanley Kimbung Mbandi; Michèle Tameris; Gerhard Walzl; Kogieleum Naidoo; Gavin Churchyard; Thomas J Scriba; Mark Hatherill Journal: EClinicalMedicine Date: 2022-03-05